RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 TCP10Q12799 353 aa23.42■■□□□ 1.34
ABCF3-214ENST00000480562 TAF1CQ15572 869 aaPredicted RBP23.42■■□□□ 1.34
ABCF3-214ENST00000480562 INTS3Q68E01 1043 aaKnown RBP23.42■■□□□ 1.34
ABCF3-214ENST00000480562 FAM43AQ8N2R8 423 aa23.42■■□□□ 1.34
ABCF3-214ENST00000480562 HOOK2Q96ED9 719 aa23.42■■□□□ 1.34
ABCF3-214ENST00000480562 HTTP42858 3142 aa23.42■■□□□ 1.34
ABCF3-214ENST00000480562 RPAP1Q9BWH6 1393 aaPredicted RBP23.41■■□□□ 1.34
ABCF3-214ENST00000480562 NFIAQ12857 509 aa23.41■■□□□ 1.34
ABCF3-214ENST00000480562 DCAF15Q66K64 600 aa23.41■■□□□ 1.34
ABCF3-214ENST00000480562 ERO1BQ86YB8 467 aa23.41■■□□□ 1.34
ABCF3-214ENST00000480562 FAM151AQ8WW52 585 aa23.41■■□□□ 1.34
ABCF3-214ENST00000480562 ARHGAP45Q92619 1136 aa23.41■■□□□ 1.34
ABCF3-214ENST00000480562 DENND2AQ9ULE3 1009 aa23.41■■□□□ 1.34
ABCF3-214ENST00000480562 TIMM10P62072 90 aa23.4■■□□□ 1.34
ABCF3-214ENST00000480562 CCDC102BQ68D86 513 aa23.4■■□□□ 1.34
ABCF3-214ENST00000480562 ZNF341Q9BYN7 854 aa23.4■■□□□ 1.34
ABCF3-214ENST00000480562 EFCC1Q9HA90 598 aa23.4■■□□□ 1.34
ABCF3-214ENST00000480562 ZFYVE28Q9HCC9 887 aa23.4■■□□□ 1.34
ABCF3-214ENST00000480562 PTPN22Q9Y2R2 807 aa23.4■■□□□ 1.34
ABCF3-214ENST00000480562 SALL1Q9NSC2 1324 aa23.39■■□□□ 1.34
ABCF3-214ENST00000480562 IRF6O14896 467 aa23.39■■□□□ 1.33
ABCF3-214ENST00000480562 SEMA3EO15041 775 aa23.39■■□□□ 1.33
ABCF3-214ENST00000480562 INPP5BP32019 993 aa23.39■■□□□ 1.33
ABCF3-214ENST00000480562 USP40Q9NVE5 1235 aa23.39■■□□□ 1.33
ABCF3-214ENST00000480562 TNNQ9UQP3 1299 aa23.39■■□□□ 1.33
ABCF3-214ENST00000480562 SRGAP3O43295 1099 aa23.38■■□□□ 1.33
ABCF3-214ENST00000480562 GNAI3P08754 354 aa23.38■■□□□ 1.33
ABCF3-214ENST00000480562 CETPP11597 493 aa23.38■■□□□ 1.33
ABCF3-214ENST00000480562 FAM198AQ9UFP1 575 aa23.38■■□□□ 1.33
ABCF3-214ENST00000480562 TFCP2Q12800 502 aa23.37■■□□□ 1.33
ABCF3-214ENST00000480562 PPIL2Q13356 520 aa23.37■■□□□ 1.33
ABCF3-214ENST00000480562 SNAPC2Q13487 334 aa23.37■■□□□ 1.33
ABCF3-214ENST00000480562 ZFPM1Q8IX07 1006 aa23.37■■□□□ 1.33
ABCF3-214ENST00000480562 BTBD19C9JJ37 291 aa23.36■■□□□ 1.33
ABCF3-214ENST00000480562 BCAR3O75815 825 aa23.36■■□□□ 1.33
ABCF3-214ENST00000480562 TRIM27P14373 513 aa23.36■■□□□ 1.33
ABCF3-214ENST00000480562 RASGRF1Q13972 1273 aa23.36■■□□□ 1.33
ABCF3-214ENST00000480562 FRAT1Q92837 279 aaPredicted RBP23.36■■□□□ 1.33
ABCF3-214ENST00000480562 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.36■■□□□ 1.33
ABCF3-214ENST00000480562 A0A1B0GUL7 405 aa23.35■■□□□ 1.33
ABCF3-214ENST00000480562 MTX1Q13505 466 aa23.35■■□□□ 1.33
ABCF3-214ENST00000480562 XAGE2Q96GT9 111 aa23.35■■□□□ 1.33
ABCF3-214ENST00000480562 AK9Q5TCS8 1911 aa23.35■■□□□ 1.33
ABCF3-214ENST00000480562 POTEFA5A3E0 1075 aa23.34■■□□□ 1.33
ABCF3-214ENST00000480562 IPO8O15397 1037 aaKnown RBP23.34■■□□□ 1.33
ABCF3-214ENST00000480562 SLC34A2O95436 690 aa23.34■■□□□ 1.33
ABCF3-214ENST00000480562 PPATQ06203 517 aa23.34■■□□□ 1.33
ABCF3-214ENST00000480562 ZGPATQ8N5A5 531 aaKnown RBP23.34■■□□□ 1.33
ABCF3-214ENST00000480562 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.34■■□□□ 1.33
ABCF3-214ENST00000480562 ABCF2Q9UG63 623 aa23.34■■□□□ 1.33
ABCF3-214ENST00000480562 ZNF112Q9UJU3 913 aa23.34■■□□□ 1.33
ABCF3-214ENST00000480562 ATF7IPQ6VMQ6 1270 aa23.33■■□□□ 1.33
ABCF3-214ENST00000480562 DZIP1Q86YF9 867 aaKnown RBP23.33■■□□□ 1.33
ABCF3-214ENST00000480562 CLUAP1Q96AJ1 413 aa23.33■■□□□ 1.33
ABCF3-214ENST00000480562 AKAP2Q9Y2D5 859 aa23.33■■□□□ 1.33
ABCF3-214ENST00000480562 GAKO14976 1311 aa23.33■■□□□ 1.32
ABCF3-214ENST00000480562 CENPFP49454 3210 aa23.32■■□□□ 1.32
ABCF3-214ENST00000480562 ZBTB22O15209 634 aa23.32■■□□□ 1.32
ABCF3-214ENST00000480562 WDHD1O75717 1129 aaPredicted RBP23.32■■□□□ 1.32
ABCF3-214ENST00000480562 RGS3P49796 1198 aa23.32■■□□□ 1.32
ABCF3-214ENST00000480562 NEUROD6Q96NK8 337 aa23.32■■□□□ 1.32
ABCF3-214ENST00000480562 ZCCHC17Q9NP64 241 aaKnown RBP23.32■■□□□ 1.32
ABCF3-214ENST00000480562 MYH2Q9UKX2 1941 aa23.31■■□□□ 1.32
ABCF3-214ENST00000480562 TLR2O60603 784 aa23.31■■□□□ 1.32
ABCF3-214ENST00000480562 GNAI2P04899 355 aa23.31■■□□□ 1.32
ABCF3-214ENST00000480562 MVPQ14764 893 aaKnown RBP23.31■■□□□ 1.32
ABCF3-214ENST00000480562 ARMC5Q96C12 935 aa23.31■■□□□ 1.32
ABCF3-214ENST00000480562 ARHGAP39Q9C0H5 1083 aa23.31■■□□□ 1.32
ABCF3-214ENST00000480562 PDS5AQ29RF7 1337 aaKnown RBP23.31■■□□□ 1.32
ABCF3-214ENST00000480562 ARHGEF6Q15052 776 aa23.3■■□□□ 1.32
ABCF3-214ENST00000480562 PRPF38BQ5VTL8 546 aaKnown RBP23.3■■□□□ 1.32
ABCF3-214ENST00000480562 IDI2Q9BXS1 227 aa23.3■■□□□ 1.32
ABCF3-214ENST00000480562 PTCH2Q9Y6C5 1203 aa23.3■■□□□ 1.32
ABCF3-214ENST00000480562 PNMA6EA0A0J9YXQ4 647 aa23.29■■□□□ 1.32
ABCF3-214ENST00000480562 ENTPD3O75355 529 aa23.29■■□□□ 1.32
ABCF3-214ENST00000480562 ECM2O94769 699 aaPredicted RBP23.29■■□□□ 1.32
ABCF3-214ENST00000480562 NOL9Q5SY16 702 aaKnown RBP23.29■■□□□ 1.32
ABCF3-214ENST00000480562 SPTY2D1Q68D10 685 aaPredicted RBP23.29■■□□□ 1.32
ABCF3-214ENST00000480562 SH3BP5LQ7L8J4 393 aa23.29■■□□□ 1.32
ABCF3-214ENST00000480562 KCNH4Q9UQ05 1017 aa23.29■■□□□ 1.32
ABCF3-214ENST00000480562 ATRNL1Q5VV63 1379 aa23.28■■□□□ 1.32
ABCF3-214ENST00000480562 SLURP2P0DP57 97 aa23.28■■□□□ 1.32
ABCF3-214ENST00000480562 BTDP43251 543 aa23.28■■□□□ 1.32
ABCF3-214ENST00000480562 PI16Q6UXB8 463 aa23.28■■□□□ 1.32
ABCF3-214ENST00000480562 ZSCAN29Q8IWY8 852 aaPredicted RBP23.28■■□□□ 1.32
ABCF3-214ENST00000480562 SLF2Q8IX21 1173 aa23.28■■□□□ 1.32
ABCF3-214ENST00000480562 ZSWIM8A7E2V4 1837 aa23.28■■□□□ 1.32
ABCF3-214ENST00000480562 RFX7Q2KHR2 1363 aa23.27■■□□□ 1.32
ABCF3-214ENST00000480562 KIAA0100Q14667 2235 aaKnown RBP23.27■■□□□ 1.32
ABCF3-214ENST00000480562 PDHXO00330 501 aa23.27■■□□□ 1.32
ABCF3-214ENST00000480562 LACTBP83111 547 aaPredicted RBP23.27■■□□□ 1.32
ABCF3-214ENST00000480562 MECOMQ03112 1051 aa23.27■■□□□ 1.32
ABCF3-214ENST00000480562 G3BP1Q13283 466 aaKnown RBP eCLIP23.27■■□□□ 1.32
ABCF3-214ENST00000480562 PICALMQ13492 652 aa23.27■■□□□ 1.32
ABCF3-214ENST00000480562 MOGSQ13724 837 aa23.27■■□□□ 1.32
ABCF3-214ENST00000480562 KIF22Q14807 665 aa23.27■■□□□ 1.32
ABCF3-214ENST00000480562 GORABQ5T7V8 394 aa23.27■■□□□ 1.32
ABCF3-214ENST00000480562 ERICH6Q7L0X2 663 aa23.27■■□□□ 1.32
ABCF3-214ENST00000480562 ANKRD23Q86SG2 305 aa23.27■■□□□ 1.32
ABCF3-214ENST00000480562 TMEM57Q8N5G2 664 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 182.3 ms