RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 ZNF576Q9H609 170 aa4.73□□□□□ -1.65
CACUL1-202ENST00000477583 SLC5A6Q9Y289 635 aa4.73□□□□□ -1.65
CACUL1-202ENST00000477583 DAGLAQ9Y4D2 1042 aa4.73□□□□□ -1.65
CACUL1-202ENST00000477583 DYNC1LI2O43237 492 aaPredicted RBP4.72□□□□□ -1.65
CACUL1-202ENST00000477583 PDE3AQ14432 1141 aa4.72□□□□□ -1.65
CACUL1-202ENST00000477583 SEZ6L2Q6UXD5 910 aa4.72□□□□□ -1.65
CACUL1-202ENST00000477583 TXNDC2Q86VQ3 553 aa4.72□□□□□ -1.65
CACUL1-202ENST00000477583 STK11IPQ8N1F8 1099 aa4.72□□□□□ -1.65
CACUL1-202ENST00000477583 WDR18Q9BV38 432 aa4.72□□□□□ -1.65
CACUL1-202ENST00000477583 GSX1Q9H4S2 264 aaPredicted RBP4.72□□□□□ -1.65
CACUL1-202ENST00000477583 C1GALT1Q9NS00 363 aa4.72□□□□□ -1.65
CACUL1-202ENST00000477583 AOC2O75106 756 aa4.71□□□□□ -1.66
CACUL1-202ENST00000477583 CYP27C1Q4G0S4 372 aa4.71□□□□□ -1.66
CACUL1-202ENST00000477583 KIAA0319Q5VV43 1072 aa4.71□□□□□ -1.66
CACUL1-202ENST00000477583 OGFOD3Q6PK18 319 aa4.71□□□□□ -1.66
CACUL1-202ENST00000477583 ZNF574Q6ZN55 896 aaPredicted RBP4.71□□□□□ -1.66
CACUL1-202ENST00000477583 CCER1Q8TC90 406 aaPredicted RBP4.71□□□□□ -1.66
CACUL1-202ENST00000477583 BCL7CQ8WUZ0 217 aaPredicted RBP4.71□□□□□ -1.66
CACUL1-202ENST00000477583 LGR6Q9HBX8 967 aa4.71□□□□□ -1.66
CACUL1-202ENST00000477583 GNEQ9Y223 722 aaKnown RBP4.71□□□□□ -1.66
CACUL1-202ENST00000477583 IVNS1ABPQ9Y6Y0 642 aa4.71□□□□□ -1.66
CACUL1-202ENST00000477583 PATL2C9JE40 543 aaKnown RBP4.7□□□□□ -1.66
CACUL1-202ENST00000477583 BIN1O00499 593 aa4.7□□□□□ -1.66
CACUL1-202ENST00000477583 PAPLNO95428 1278 aa4.7□□□□□ -1.66
CACUL1-202ENST00000477583 NEFLP07196 543 aa4.7□□□□□ -1.66
CACUL1-202ENST00000477583 ITPKAP23677 461 aa4.7□□□□□ -1.66
CACUL1-202ENST00000477583 SERPINB4P48594 390 aa4.7□□□□□ -1.66
CACUL1-202ENST00000477583 TRIM26Q12899 539 aaPredicted RBP4.7□□□□□ -1.66
CACUL1-202ENST00000477583 AP3B2Q13367 1082 aa4.7□□□□□ -1.66
CACUL1-202ENST00000477583 ZNF792Q3KQV3 632 aa4.7□□□□□ -1.66
CACUL1-202ENST00000477583 USPL1Q5W0Q7 1092 aa4.7□□□□□ -1.66
CACUL1-202ENST00000477583 WFDC3Q8IUB2 231 aa4.7□□□□□ -1.66
CACUL1-202ENST00000477583 MISP3Q96FF7 219 aa4.7□□□□□ -1.66
CACUL1-202ENST00000477583 EHD4Q9H223 541 aa4.7□□□□□ -1.66
CACUL1-202ENST00000477583 NPHS2Q9NP85 383 aa4.7□□□□□ -1.66
CACUL1-202ENST00000477583 BRPF3Q9ULD4 1205 aa4.7□□□□□ -1.66
CACUL1-202ENST00000477583 PPP1R9AQ9ULJ8 1098 aa4.7□□□□□ -1.66
CACUL1-202ENST00000477583 SYNGAP1Q96PV0 1343 aa4.7□□□□□ -1.66
CACUL1-202ENST00000477583 TMPRSS2O15393 492 aa4.69□□□□□ -1.66
CACUL1-202ENST00000477583 NETO1Q8TDF5 533 aa4.69□□□□□ -1.66
CACUL1-202ENST00000477583 PIDD1Q9HB75 910 aa4.69□□□□□ -1.66
CACUL1-202ENST00000477583 ZBTB7CA1YPR0 619 aa4.68□□□□□ -1.66
CACUL1-202ENST00000477583 H3BRB1 525 aa4.68□□□□□ -1.66
CACUL1-202ENST00000477583 ICMTO60725 284 aa4.68□□□□□ -1.66
CACUL1-202ENST00000477583 CPNE3O75131 537 aaKnown RBP4.68□□□□□ -1.66
CACUL1-202ENST00000477583 FAM87AP0C7U9 286 aa4.68□□□□□ -1.66
CACUL1-202ENST00000477583 HNRNPUQ00839 825 aaKnown RBP eCLIP4.68□□□□□ -1.66
CACUL1-202ENST00000477583 PTPN12Q05209 780 aaKnown RBP4.68□□□□□ -1.66
CACUL1-202ENST00000477583 CDK5R2Q13319 367 aa4.68□□□□□ -1.66
CACUL1-202ENST00000477583 ORC1Q13415 861 aa4.68□□□□□ -1.66
CACUL1-202ENST00000477583 SPRED2Q7Z698 418 aa4.68□□□□□ -1.66
CACUL1-202ENST00000477583 PLD6Q8N2A8 252 aaKnown RBP4.68□□□□□ -1.66
CACUL1-202ENST00000477583 ATXN3LQ9H3M9 355 aa4.68□□□□□ -1.66
CACUL1-202ENST00000477583 TUT1Q9H6E5 874 aaKnown RBP4.68□□□□□ -1.66
CACUL1-202ENST00000477583 ABCB6Q9NP58 842 aa4.68□□□□□ -1.66
CACUL1-202ENST00000477583 EGFL7Q9UHF1 273 aa4.68□□□□□ -1.66
CACUL1-202ENST00000477583 SOWAHDA6NJG2 315 aa4.67□□□□□ -1.66
CACUL1-202ENST00000477583 NDUFB5O43674 189 aa4.67□□□□□ -1.66
CACUL1-202ENST00000477583 LIG1P18858 919 aa4.67□□□□□ -1.66
CACUL1-202ENST00000477583 FUT4P22083 530 aa4.67□□□□□ -1.66
CACUL1-202ENST00000477583 ID3Q02535 119 aa4.67□□□□□ -1.66
CACUL1-202ENST00000477583 BNIP3Q12983 259 aa4.67□□□□□ -1.66
CACUL1-202ENST00000477583 ZNF648Q5T619 568 aaPredicted RBP4.67□□□□□ -1.66
CACUL1-202ENST00000477583 GLYCTKQ8IVS8 523 aa4.67□□□□□ -1.66
CACUL1-202ENST00000477583 FAM181AQ8N9Y4 354 aa4.67□□□□□ -1.66
CACUL1-202ENST00000477583 ZC3H12CQ9C0D7 883 aaKnown RBP4.67□□□□□ -1.66
CACUL1-202ENST00000477583 GZF1Q9H116 711 aaPredicted RBP4.67□□□□□ -1.66
CACUL1-202ENST00000477583 CCDC86Q9H6F5 360 aaKnown RBP4.67□□□□□ -1.66
CACUL1-202ENST00000477583 RC3H2Q9HBD1 1191 aaKnown RBP4.67□□□□□ -1.66
CACUL1-202ENST00000477583 CRIM1Q9NZV1 1036 aa4.67□□□□□ -1.66
CACUL1-202ENST00000477583 CARMIL2Q6F5E8 1435 aa4.66□□□□□ -1.66
CACUL1-202ENST00000477583 GADD45BO75293 160 aaPredicted RBP4.66□□□□□ -1.66
CACUL1-202ENST00000477583 SLFN14P0C7P3 912 aa4.66□□□□□ -1.66
CACUL1-202ENST00000477583 CD8BP10966 210 aa4.66□□□□□ -1.66
CACUL1-202ENST00000477583 ZNF157P51786 506 aaPredicted RBP4.66□□□□□ -1.66
CACUL1-202ENST00000477583 PDE3BQ13370 1112 aa4.66□□□□□ -1.66
CACUL1-202ENST00000477583 RPS26P11Q5JNZ5 115 aaPredicted RBP4.66□□□□□ -1.66
CACUL1-202ENST00000477583 PRPF40BQ6NWY9 871 aaKnown RBP4.66□□□□□ -1.66
CACUL1-202ENST00000477583 ARHGAP27Q6ZUM4 889 aa4.66□□□□□ -1.66
CACUL1-202ENST00000477583 ATG4DQ86TL0 474 aaPredicted RBP4.66□□□□□ -1.66
CACUL1-202ENST00000477583 SMYD4Q8IYR2 804 aaPredicted RBP4.66□□□□□ -1.66
CACUL1-202ENST00000477583 WDR89Q96FK6 387 aaPredicted RBP4.66□□□□□ -1.66
CACUL1-202ENST00000477583 FANCD2OSQ96PS1 177 aa4.66□□□□□ -1.66
CACUL1-202ENST00000477583 FAM129BQ96TA1 746 aa4.66□□□□□ -1.66
CACUL1-202ENST00000477583 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.66□□□□□ -1.66
CACUL1-202ENST00000477583 TMEM238LA0A1B0GVL6 79 aa4.65□□□□□ -1.67
CACUL1-202ENST00000477583 RNASE1P07998 156 aaKnown RBP4.65□□□□□ -1.67
CACUL1-202ENST00000477583 PRKCQQ04759 706 aa4.65□□□□□ -1.67
CACUL1-202ENST00000477583 FAAP100Q0VG06 881 aa4.65□□□□□ -1.67
CACUL1-202ENST00000477583 ECM1Q16610 540 aa4.65□□□□□ -1.67
CACUL1-202ENST00000477583 IFI16Q16666 785 aaKnown RBP4.65□□□□□ -1.67
CACUL1-202ENST00000477583 GLIS3Q8NEA6 775 aa4.65□□□□□ -1.67
CACUL1-202ENST00000477583 FAM168AQ92567 244 aa4.65□□□□□ -1.67
CACUL1-202ENST00000477583 CCDC74AQ96AQ1 378 aa4.65□□□□□ -1.67
CACUL1-202ENST00000477583 VAV3Q9UKW4 847 aa4.65□□□□□ -1.67
CACUL1-202ENST00000477583 TRAK1Q9UPV9 953 aa4.65□□□□□ -1.67
CACUL1-202ENST00000477583 ZNF862O60290 1169 aa4.64□□□□□ -1.67
CACUL1-202ENST00000477583 RNGTTO60942 597 aaKnown RBP4.64□□□□□ -1.67
CACUL1-202ENST00000477583 FARP2O94887 1054 aaPredicted RBP4.64□□□□□ -1.67
CACUL1-202ENST00000477583 CEACAM5P06731 702 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms