RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 APAF1O14727 1248 aa17.94■□□□□ 0.46
ATG9A-220ENST00000475339 PARK7Q99497 189 aaKnown RBP17.94■□□□□ 0.46
ATG9A-220ENST00000475339 NBPF3Q9H094 633 aa17.94■□□□□ 0.46
ATG9A-220ENST00000475339 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.94■□□□□ 0.46
ATG9A-220ENST00000475339 ARAP2Q8WZ64 1704 aa17.94■□□□□ 0.46
ATG9A-220ENST00000475339 MYH3P11055 1940 aa17.94■□□□□ 0.46
ATG9A-220ENST00000475339 CRKP46108 304 aa17.93■□□□□ 0.46
ATG9A-220ENST00000475339 IRF5Q13568 498 aa17.93■□□□□ 0.46
ATG9A-220ENST00000475339 UBE3BQ7Z3V4 1068 aa17.93■□□□□ 0.46
ATG9A-220ENST00000475339 ANKLE1Q8NAG6 615 aa17.93■□□□□ 0.46
ATG9A-220ENST00000475339 MAFAQ8NHW3 353 aaPredicted RBP17.93■□□□□ 0.46
ATG9A-220ENST00000475339 KCNH4Q9UQ05 1017 aa17.93■□□□□ 0.46
ATG9A-220ENST00000475339 MGAMO43451 1857 aa17.92■□□□□ 0.46
ATG9A-220ENST00000475339 DDX58O95786 925 aaKnown RBP17.92■□□□□ 0.46
ATG9A-220ENST00000475339 INPP5BP32019 993 aa17.92■□□□□ 0.46
ATG9A-220ENST00000475339 MDM2Q00987 491 aaPredicted RBP17.92■□□□□ 0.46
ATG9A-220ENST00000475339 CWF19L2Q2TBE0 894 aaKnown RBP17.92■□□□□ 0.46
ATG9A-220ENST00000475339 MIGA2Q7L4E1 593 aa17.92■□□□□ 0.46
ATG9A-220ENST00000475339 CDX2Q99626 313 aaPredicted RBP17.92■□□□□ 0.46
ATG9A-220ENST00000475339 C11orf49Q9H6J7 331 aa17.92■□□□□ 0.46
ATG9A-220ENST00000475339 TRIM35Q9UPQ4 493 aa17.92■□□□□ 0.46
ATG9A-220ENST00000475339 ELL2O00472 640 aaPredicted RBP17.91■□□□□ 0.46
ATG9A-220ENST00000475339 TNPO2O14787 897 aaKnown RBP17.91■□□□□ 0.46
ATG9A-220ENST00000475339 GPAT2Q6NUI2 795 aa17.91■□□□□ 0.46
ATG9A-220ENST00000475339 SYMPKQ92797 1274 aaKnown RBP17.91■□□□□ 0.46
ATG9A-220ENST00000475339 H7C1W4 665 aa17.9■□□□□ 0.46
ATG9A-220ENST00000475339 PLA2G5P39877 138 aa17.9■□□□□ 0.46
ATG9A-220ENST00000475339 CALD1Q05682 793 aaKnown RBP17.9■□□□□ 0.46
ATG9A-220ENST00000475339 ZNF697Q5TEC3 545 aa17.9■□□□□ 0.46
ATG9A-220ENST00000475339 FAM9BQ8IZU0 186 aa17.9■□□□□ 0.46
ATG9A-220ENST00000475339 MBIPQ9NS73 344 aa17.9■□□□□ 0.46
ATG9A-220ENST00000475339 CDH23Q9H251 3354 aa17.89■□□□□ 0.45
ATG9A-220ENST00000475339 PI4KAP2A4QPH2 592 aa17.89■□□□□ 0.45
ATG9A-220ENST00000475339 GRIK5Q16478 980 aa17.89■□□□□ 0.45
ATG9A-220ENST00000475339 DCAF15Q66K64 600 aa17.89■□□□□ 0.45
ATG9A-220ENST00000475339 PI4KAP1Q8N8J0 262 aa17.89■□□□□ 0.45
ATG9A-220ENST00000475339 ZNF341Q9BYN7 854 aa17.89■□□□□ 0.45
ATG9A-220ENST00000475339 NEURL1BA8MQ27 555 aa17.88■□□□□ 0.45
ATG9A-220ENST00000475339 CSF1RP07333 972 aa17.88■□□□□ 0.45
ATG9A-220ENST00000475339 KSR2Q6VAB6 950 aa17.88■□□□□ 0.45
ATG9A-220ENST00000475339 HOOK2Q96ED9 719 aa17.88■□□□□ 0.45
ATG9A-220ENST00000475339 PLA2G12BQ9BX93 195 aa17.88■□□□□ 0.45
ATG9A-220ENST00000475339 TDRD7Q8NHU6 1098 aaKnown RBP17.87■□□□□ 0.45
ATG9A-220ENST00000475339 FAM122AQ96E09 287 aa17.87■□□□□ 0.45
ATG9A-220ENST00000475339 DOCK3Q8IZD9 2030 aa17.87■□□□□ 0.45
ATG9A-220ENST00000475339 COL2A1P02458 1487 aaPredicted RBP17.87■□□□□ 0.45
ATG9A-220ENST00000475339 ANKRD18BA2A2Z9 1011 aa17.86■□□□□ 0.45
ATG9A-220ENST00000475339 TNFRSF10AO00220 468 aa17.86■□□□□ 0.45
ATG9A-220ENST00000475339 NEXNQ0ZGT2 675 aa17.86■□□□□ 0.45
ATG9A-220ENST00000475339 DIEXFQ68CQ4 756 aaKnown RBP17.86■□□□□ 0.45
ATG9A-220ENST00000475339 FAM83AQ86UY5 434 aa17.86■□□□□ 0.45
ATG9A-220ENST00000475339 PFASO15067 1338 aa17.86■□□□□ 0.45
ATG9A-220ENST00000475339 PLIN1O60240 522 aa17.85■□□□□ 0.45
ATG9A-220ENST00000475339 TRIM32Q13049 653 aa17.85■□□□□ 0.45
ATG9A-220ENST00000475339 DDX60LQ5H9U9 1706 aaKnown RBP17.85■□□□□ 0.45
ATG9A-220ENST00000475339 COA7Q96BR5 231 aa17.85■□□□□ 0.45
ATG9A-220ENST00000475339 SEMA6BQ9H3T3 888 aa17.85■□□□□ 0.45
ATG9A-220ENST00000475339 HMX1Q9NP08 348 aaPredicted RBP17.85■□□□□ 0.45
ATG9A-220ENST00000475339 TMOD2Q9NZR1 351 aa17.85■□□□□ 0.45
ATG9A-220ENST00000475339 CXCL11O14625 94 aa17.84■□□□□ 0.45
ATG9A-220ENST00000475339 HMGCRP04035 888 aa17.84■□□□□ 0.45
ATG9A-220ENST00000475339 GYG1P46976 350 aa17.84■□□□□ 0.45
ATG9A-220ENST00000475339 MYLIPQ8WY64 445 aa17.84■□□□□ 0.45
ATG9A-220ENST00000475339 ZNF112Q9UJU3 913 aa17.84■□□□□ 0.45
ATG9A-220ENST00000475339 OGDHLQ9ULD0 1010 aa17.84■□□□□ 0.45
ATG9A-220ENST00000475339 CASP7P55210 303 aa17.83■□□□□ 0.44
ATG9A-220ENST00000475339 TMEM265A0A087WTH1 108 aa17.82■□□□□ 0.44
ATG9A-220ENST00000475339 CCER2I3L3R5 266 aa17.82■□□□□ 0.44
ATG9A-220ENST00000475339 HIBADHP31937 336 aaKnown RBP17.82■□□□□ 0.44
ATG9A-220ENST00000475339 GNAI1P63096 354 aa17.82■□□□□ 0.44
ATG9A-220ENST00000475339 HDLBPQ00341 1268 aaKnown RBP17.82■□□□□ 0.44
ATG9A-220ENST00000475339 GCKRQ14397 625 aa17.82■□□□□ 0.44
ATG9A-220ENST00000475339 FKBP1CQ5VVH2 108 aa17.82■□□□□ 0.44
ATG9A-220ENST00000475339 SMCR8Q8TEV9 937 aaPredicted RBP17.82■□□□□ 0.44
ATG9A-220ENST00000475339 TEKT1Q969V4 418 aa17.82■□□□□ 0.44
ATG9A-220ENST00000475339 IFT57Q9NWB7 429 aa17.82■□□□□ 0.44
ATG9A-220ENST00000475339 HOXD11P31277 338 aaPredicted RBP17.81■□□□□ 0.44
ATG9A-220ENST00000475339 IFIT5Q13325 482 aaKnown RBP17.81■□□□□ 0.44
ATG9A-220ENST00000475339 LRRC26Q2I0M4 334 aa17.81■□□□□ 0.44
ATG9A-220ENST00000475339 CCDC27Q2M243 656 aa17.81■□□□□ 0.44
ATG9A-220ENST00000475339 TJAP1Q5JTD0 557 aa17.81■□□□□ 0.44
ATG9A-220ENST00000475339 NOL9Q5SY16 702 aaKnown RBP17.81■□□□□ 0.44
ATG9A-220ENST00000475339 APOBEC3HQ6NTF7 200 aaKnown RBP17.81■□□□□ 0.44
ATG9A-220ENST00000475339 FASTKD5Q7L8L6 764 aaKnown RBP17.81■□□□□ 0.44
ATG9A-220ENST00000475339 ANKRD13CQ8N6S4 541 aa17.81■□□□□ 0.44
ATG9A-220ENST00000475339 C8orf58Q8NAV2 365 aa17.81■□□□□ 0.44
ATG9A-220ENST00000475339 FAM84BQ96KN1 310 aaPredicted RBP17.81■□□□□ 0.44
ATG9A-220ENST00000475339 ZDHHC15Q96MV8 337 aa17.81■□□□□ 0.44
ATG9A-220ENST00000475339 SALL2Q9Y467 1007 aaPredicted RBP17.81■□□□□ 0.44
ATG9A-220ENST00000475339 RPAP1Q9BWH6 1393 aaPredicted RBP17.8■□□□□ 0.44
ATG9A-220ENST00000475339 A0A0G2JLL6 359 aaPredicted RBP17.8■□□□□ 0.44
ATG9A-220ENST00000475339 ZNF853P0CG23 659 aa17.8■□□□□ 0.44
ATG9A-220ENST00000475339 COL6A1P12109 1028 aa17.8■□□□□ 0.44
ATG9A-220ENST00000475339 CCDC30Q5VVM6 783 aa17.8■□□□□ 0.44
ATG9A-220ENST00000475339 GADL1Q6ZQY3 521 aa17.8■□□□□ 0.44
ATG9A-220ENST00000475339 PRRT2Q7Z6L0 340 aaPredicted RBP17.8■□□□□ 0.44
ATG9A-220ENST00000475339 LBHD1Q9BQE6 289 aaPredicted RBP17.8■□□□□ 0.44
ATG9A-220ENST00000475339 CHMP3Q9Y3E7 222 aa17.8■□□□□ 0.44
ATG9A-220ENST00000475339 A0A1B0GUL6 1792 aa17.79■□□□□ 0.44
ATG9A-220ENST00000475339 FOSL2P15408 326 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms