RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 ZNF384Q8TF68 577 aa12.84□□□□□ -0.35
SP140-208ENST00000473711 KCNB2Q92953 911 aa12.84□□□□□ -0.35
SP140-208ENST00000473711 STRBPQ96SI9 672 aaKnown RBP12.84□□□□□ -0.35
SP140-208ENST00000473711 FAM205AQ6ZU69 1335 aa12.84□□□□□ -0.35
SP140-208ENST00000473711 KIF13BQ9NQT8 1826 aa12.83□□□□□ -0.35
SP140-208ENST00000473711 MAGEB6P1A0A0J9YX57 407 aa12.83□□□□□ -0.36
SP140-208ENST00000473711 PPIP5K2O43314 1243 aa12.83□□□□□ -0.36
SP140-208ENST00000473711 APPP05067 770 aa12.83□□□□□ -0.36
SP140-208ENST00000473711 ZKSCAN1P17029 563 aaPredicted RBP12.83□□□□□ -0.36
SP140-208ENST00000473711 DYNLL1P63167 89 aaKnown RBP12.83□□□□□ -0.36
SP140-208ENST00000473711 BECN1Q14457 450 aa12.83□□□□□ -0.36
SP140-208ENST00000473711 MFSD14BQ5SR56 506 aa12.83□□□□□ -0.36
SP140-208ENST00000473711 SOGA3Q5TF21 947 aa12.83□□□□□ -0.36
SP140-208ENST00000473711 RNF20Q5VTR2 975 aa12.83□□□□□ -0.36
SP140-208ENST00000473711 TTLL5Q6EMB2 1281 aa12.83□□□□□ -0.36
SP140-208ENST00000473711 PODNQ7Z5L7 613 aa12.83□□□□□ -0.36
SP140-208ENST00000473711 DZIP1Q86YF9 867 aaKnown RBP12.83□□□□□ -0.36
SP140-208ENST00000473711 LCORLQ8N3X6 602 aa12.83□□□□□ -0.36
SP140-208ENST00000473711 TBC1D22AQ8WUA7 517 aa12.83□□□□□ -0.36
SP140-208ENST00000473711 KCNQ5Q9NR82 932 aa12.83□□□□□ -0.36
SP140-208ENST00000473711 DAXXQ9UER7 740 aaPredicted RBP12.83□□□□□ -0.36
SP140-208ENST00000473711 BCS1LQ9Y276 419 aa12.83□□□□□ -0.36
SP140-208ENST00000473711 SNED1Q8TER0 1413 aa12.82□□□□□ -0.36
SP140-208ENST00000473711 PATL2C9JE40 543 aaKnown RBP12.82□□□□□ -0.36
SP140-208ENST00000473711 FOXP2O15409 715 aa12.82□□□□□ -0.36
SP140-208ENST00000473711 PRKAB2O43741 272 aa12.82□□□□□ -0.36
SP140-208ENST00000473711 ECE2O60344 883 aa12.82□□□□□ -0.36
SP140-208ENST00000473711 FGAP02671 866 aa12.82□□□□□ -0.36
SP140-208ENST00000473711 KIAA2012Q0VF49 1180 aa12.82□□□□□ -0.36
SP140-208ENST00000473711 MKRN3Q13064 507 aaKnown RBP12.82□□□□□ -0.36
SP140-208ENST00000473711 NLGN2Q8NFZ4 835 aa12.82□□□□□ -0.36
SP140-208ENST00000473711 IL17RAQ96F46 866 aa12.82□□□□□ -0.36
SP140-208ENST00000473711 PSMD1Q99460 953 aa12.82□□□□□ -0.36
SP140-208ENST00000473711 MXD3Q9BW11 206 aa12.82□□□□□ -0.36
SP140-208ENST00000473711 TBC1D2Q9BYX2 928 aa12.82□□□□□ -0.36
SP140-208ENST00000473711 ZNF277Q9NRM2 450 aaPredicted RBP12.82□□□□□ -0.36
SP140-208ENST00000473711 DLEC1Q9Y238 1755 aa12.81□□□□□ -0.36
SP140-208ENST00000473711 DOCK2Q92608 1830 aa12.81□□□□□ -0.36
SP140-208ENST00000473711 LDHCP07864 332 aa12.81□□□□□ -0.36
SP140-208ENST00000473711 NEK4P51957 841 aa12.81□□□□□ -0.36
SP140-208ENST00000473711 GSTO1P78417 241 aa12.81□□□□□ -0.36
SP140-208ENST00000473711 ADCK5Q3MIX3 580 aa12.81□□□□□ -0.36
SP140-208ENST00000473711 SNX21Q969T3 373 aa12.81□□□□□ -0.36
SP140-208ENST00000473711 JAKMIP1Q96N16 626 aaKnown RBP12.81□□□□□ -0.36
SP140-208ENST00000473711 CTNNA3Q9UI47 895 aa12.81□□□□□ -0.36
SP140-208ENST00000473711 TAF6LQ9Y6J9 622 aa12.81□□□□□ -0.36
SP140-208ENST00000473711 SLC4A4Q9Y6R1 1079 aa12.81□□□□□ -0.36
SP140-208ENST00000473711 MYH7P12883 1935 aa12.81□□□□□ -0.36
SP140-208ENST00000473711 GSG1L2A8MUP6 293 aa12.8□□□□□ -0.36
SP140-208ENST00000473711 F8W031 263 aaPredicted RBP12.8□□□□□ -0.36
SP140-208ENST00000473711 IGSF3O75054 1194 aa12.8□□□□□ -0.36
SP140-208ENST00000473711 CD2BP2O95400 341 aaKnown RBP12.8□□□□□ -0.36
SP140-208ENST00000473711 CYP21A2P08686 494 aa12.8□□□□□ -0.36
SP140-208ENST00000473711 GNAT2P19087 354 aa12.8□□□□□ -0.36
SP140-208ENST00000473711 DIXDC1Q155Q3 683 aa12.8□□□□□ -0.36
SP140-208ENST00000473711 TSGA10IPQ3SY00 556 aa12.8□□□□□ -0.36
SP140-208ENST00000473711 HSCBQ8IWL3 235 aa12.8□□□□□ -0.36
SP140-208ENST00000473711 IFNL3Q8IZI9 196 aa12.8□□□□□ -0.36
SP140-208ENST00000473711 LARGE2Q8N3Y3 721 aa12.8□□□□□ -0.36
SP140-208ENST00000473711 CERS5Q8N5B7 392 aa12.8□□□□□ -0.36
SP140-208ENST00000473711 RIOK1Q9BRS2 568 aaKnown RBP12.8□□□□□ -0.36
SP140-208ENST00000473711 UPF3BQ9BZI7 483 aaKnown RBP12.8□□□□□ -0.36
SP140-208ENST00000473711 AATFQ9NY61 560 aaKnown RBP eCLIP12.8□□□□□ -0.36
SP140-208ENST00000473711 KIAA1551Q9HCM1 1747 aa12.79□□□□□ -0.36
SP140-208ENST00000473711 USP17L3A6NCW0 530 aa12.79□□□□□ -0.36
SP140-208ENST00000473711 USP17L4A6NCW7 530 aa12.79□□□□□ -0.36
SP140-208ENST00000473711 ST18O60284 1047 aa12.79□□□□□ -0.36
SP140-208ENST00000473711 CPA1P15085 419 aa12.79□□□□□ -0.36
SP140-208ENST00000473711 CASTP20810 708 aaKnown RBP12.79□□□□□ -0.36
SP140-208ENST00000473711 PSMA5P28066 241 aa12.79□□□□□ -0.36
SP140-208ENST00000473711 HAND2P61296 217 aa12.79□□□□□ -0.36
SP140-208ENST00000473711 ALX1Q15699 326 aa12.79□□□□□ -0.36
SP140-208ENST00000473711 STRIP1Q5VSL9 837 aa12.79□□□□□ -0.36
SP140-208ENST00000473711 TMED8Q6PL24 325 aaPredicted RBP12.79□□□□□ -0.36
SP140-208ENST00000473711 USP17L1Q7RTZ2 530 aa12.79□□□□□ -0.36
SP140-208ENST00000473711 TM6SF1Q9BZW5 370 aa12.79□□□□□ -0.36
SP140-208ENST00000473711 MYH13Q9UKX3 1938 aa12.79□□□□□ -0.36
SP140-208ENST00000473711 YDJCA8MPS7 323 aa12.78□□□□□ -0.36
SP140-208ENST00000473711 ZNF213O14771 459 aa12.78□□□□□ -0.36
SP140-208ENST00000473711 IARSP41252 1262 aaKnown RBP12.78□□□□□ -0.36
SP140-208ENST00000473711 KRT32Q14532 448 aa12.78□□□□□ -0.36
SP140-208ENST00000473711 IMMTQ16891 758 aaKnown RBP12.78□□□□□ -0.36
SP140-208ENST00000473711 SLF2Q8IX21 1173 aa12.78□□□□□ -0.36
SP140-208ENST00000473711 SDR42E1Q8WUS8 393 aa12.78□□□□□ -0.36
SP140-208ENST00000473711 NOL10Q9BSC4 688 aaKnown RBP12.78□□□□□ -0.36
SP140-208ENST00000473711 NACAP1Q9BZK3 213 aa12.78□□□□□ -0.36
SP140-208ENST00000473711 FHDC1Q9C0D6 1143 aaPredicted RBP12.78□□□□□ -0.36
SP140-208ENST00000473711 NAPBQ9H115 298 aa12.78□□□□□ -0.36
SP140-208ENST00000473711 VPS33BQ9H267 617 aa12.78□□□□□ -0.36
SP140-208ENST00000473711 ZSWIM6Q9HCJ5 1215 aa12.78□□□□□ -0.36
SP140-208ENST00000473711 EPB41L4AQ9HCS5 686 aaPredicted RBP12.78□□□□□ -0.36
SP140-208ENST00000473711 TTF2Q9UNY4 1162 aaKnown RBP12.78□□□□□ -0.36
SP140-208ENST00000473711 SUGT1Q9Y2Z0 365 aa12.78□□□□□ -0.36
SP140-208ENST00000473711 CYP46A1Q9Y6A2 500 aa12.78□□□□□ -0.36
SP140-208ENST00000473711 E7EWF7 191 aa12.77□□□□□ -0.37
SP140-208ENST00000473711 BAG3O95817 575 aa12.77□□□□□ -0.37
SP140-208ENST00000473711 TDO2P48775 406 aa12.77□□□□□ -0.37
SP140-208ENST00000473711 DACT2Q5SW24 774 aa12.77□□□□□ -0.37
SP140-208ENST00000473711 BLOC1S2Q6QNY1 142 aa12.77□□□□□ -0.37
SP140-208ENST00000473711 STOX1Q6ZVD7 989 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms