RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 PPEF1O14829 653 aaPredicted RBP7.35□□□□□ -1.23
CLK1-210ENST00000473565 PFKFB2O60825 505 aa7.35□□□□□ -1.23
CLK1-210ENST00000473565 F13A1P00488 732 aa7.35□□□□□ -1.23
CLK1-210ENST00000473565 GPT2Q8TD30 523 aa7.35□□□□□ -1.23
CLK1-210ENST00000473565 MYL10Q9BUA6 226 aa7.35□□□□□ -1.23
CLK1-210ENST00000473565 AGXT2Q9BYV1 514 aa7.35□□□□□ -1.23
CLK1-210ENST00000473565 GGA1Q9UJY5 639 aa7.35□□□□□ -1.23
CLK1-210ENST00000473565 LEMD3Q9Y2U8 911 aa7.35□□□□□ -1.23
CLK1-210ENST00000473565 PARP3Q9Y6F1 533 aa7.35□□□□□ -1.23
CLK1-210ENST00000473565 COL11A2P13942 1736 aaPredicted RBP7.35□□□□□ -1.23
CLK1-210ENST00000473565 GOLGA8BA8MQT2 603 aa7.35□□□□□ -1.23
CLK1-210ENST00000473565 GADD45BO75293 160 aaPredicted RBP7.35□□□□□ -1.23
CLK1-210ENST00000473565 PRDM1O75626 825 aa7.35□□□□□ -1.23
CLK1-210ENST00000473565 HOXA10P31260 410 aaPredicted RBP7.35□□□□□ -1.23
CLK1-210ENST00000473565 GUCY1B3Q02153 619 aa7.35□□□□□ -1.23
CLK1-210ENST00000473565 TRDNQ13061 729 aa7.35□□□□□ -1.23
CLK1-210ENST00000473565 NSUN7Q8NE18 718 aaKnown RBP7.35□□□□□ -1.23
CLK1-210ENST00000473565 TBC1D16Q8TBP0 767 aa7.35□□□□□ -1.23
CLK1-210ENST00000473565 PTPDC1A2A3K4 754 aa7.34□□□□□ -1.23
CLK1-210ENST00000473565 FIBPO43427 364 aa7.34□□□□□ -1.23
CLK1-210ENST00000473565 SRGNP10124 158 aa7.34□□□□□ -1.23
CLK1-210ENST00000473565 CYP2D6P10635 497 aa7.34□□□□□ -1.23
CLK1-210ENST00000473565 DNM1Q05193 864 aaKnown RBP7.34□□□□□ -1.23
CLK1-210ENST00000473565 DZIP1Q86YF9 867 aaKnown RBP7.34□□□□□ -1.23
CLK1-210ENST00000473565 ZNF622Q969S3 477 aaKnown RBP eCLIP7.34□□□□□ -1.238e-9■■■■□ 20.1
CLK1-210ENST00000473565 CAMKK2Q96RR4 588 aa7.34□□□□□ -1.23
CLK1-210ENST00000473565 KLRG2A4D1S0 409 aaPredicted RBP7.34□□□□□ -1.23
CLK1-210ENST00000473565 SEMA3EO15041 775 aa7.34□□□□□ -1.23
CLK1-210ENST00000473565 BBOX1O75936 387 aa7.34□□□□□ -1.23
CLK1-210ENST00000473565 CHRNA5P30532 468 aa7.34□□□□□ -1.23
CLK1-210ENST00000473565 ALX1Q15699 326 aa7.34□□□□□ -1.23
CLK1-210ENST00000473565 SLC15A2Q16348 729 aa7.34□□□□□ -1.23
CLK1-210ENST00000473565 CAVIN1Q6NZI2 390 aaKnown RBP7.34□□□□□ -1.23
CLK1-210ENST00000473565 TDRD7Q8NHU6 1098 aaKnown RBP7.34□□□□□ -1.23
CLK1-210ENST00000473565 FBXW7Q969H0 707 aa7.34□□□□□ -1.23
CLK1-210ENST00000473565 BRIP1Q9BX63 1249 aa7.34□□□□□ -1.23
CLK1-210ENST00000473565 NACAP1Q9BZK3 213 aa7.34□□□□□ -1.23
CLK1-210ENST00000473565 CD209Q9NNX6 404 aa7.34□□□□□ -1.23
CLK1-210ENST00000473565 GJB4Q9NTQ9 266 aa7.34□□□□□ -1.23
CLK1-210ENST00000473565 ZSWIM5Q9P217 1185 aa7.34□□□□□ -1.23
CLK1-210ENST00000473565 HPS5Q9UPZ3 1129 aa7.34□□□□□ -1.23
CLK1-210ENST00000473565 PPARAQ07869 468 aa7.33□□□□□ -1.24
CLK1-210ENST00000473565 AKNAD1Q5T1N1 836 aa7.33□□□□□ -1.24
CLK1-210ENST00000473565 OTUD7BQ6GQQ9 843 aa7.33□□□□□ -1.24
CLK1-210ENST00000473565 ZNF804AQ7Z570 1209 aa7.33□□□□□ -1.24
CLK1-210ENST00000473565 USP48Q86UV5 1035 aa7.33□□□□□ -1.24
CLK1-210ENST00000473565 IL27Q8NEV9 243 aa7.33□□□□□ -1.24
CLK1-210ENST00000473565 CRAMP1Q96RY5 1269 aa7.33□□□□□ -1.24
CLK1-210ENST00000473565 MXD3Q9BW11 206 aa7.33□□□□□ -1.24
CLK1-210ENST00000473565 MYH2Q9UKX2 1941 aa7.33□□□□□ -1.24
CLK1-210ENST00000473565 CCDC88AQ3V6T2 1871 aa7.33□□□□□ -1.24
CLK1-210ENST00000473565 LDHBP07195 334 aaKnown RBP7.33□□□□□ -1.24
CLK1-210ENST00000473565 DOK7Q18PE1 504 aa7.33□□□□□ -1.24
CLK1-210ENST00000473565 MFSD6Q6ZSS7 791 aa7.33□□□□□ -1.24
CLK1-210ENST00000473565 MICU3Q86XE3 530 aa7.33□□□□□ -1.24
CLK1-210ENST00000473565 USP17L12C9JPN9 530 aa7.33□□□□□ -1.24
CLK1-210ENST00000473565 USP17L21D6R901 530 aa7.33□□□□□ -1.24
CLK1-210ENST00000473565 F8W031 263 aaPredicted RBP7.33□□□□□ -1.24
CLK1-210ENST00000473565 UBE2Q2LH0YL09 131 aa7.33□□□□□ -1.24
CLK1-210ENST00000473565 SH2B2O14492 632 aaPredicted RBP7.33□□□□□ -1.24
CLK1-210ENST00000473565 GNAT2P19087 354 aa7.33□□□□□ -1.24
CLK1-210ENST00000473565 ATP2B4P23634 1241 aa7.33□□□□□ -1.24
CLK1-210ENST00000473565 ADD1P35611 737 aaKnown RBP7.33□□□□□ -1.24
CLK1-210ENST00000473565 TMEM67Q5HYA8 995 aa7.33□□□□□ -1.24
CLK1-210ENST00000473565 C2CD5Q86YS7 1000 aa7.33□□□□□ -1.24
CLK1-210ENST00000473565 FAM184AQ8NB25 1140 aa7.33□□□□□ -1.24
CLK1-210ENST00000473565 ANGEL1Q9UNK9 670 aaKnown RBP7.33□□□□□ -1.24
CLK1-210ENST00000473565 NRXN2Q9P2S2 1712 aa7.32□□□□□ -1.24
CLK1-210ENST00000473565 IFIT3O14879 490 aaKnown RBP7.32□□□□□ -1.24
CLK1-210ENST00000473565 FDPSP14324 419 aaKnown RBP7.32□□□□□ -1.24
CLK1-210ENST00000473565 NFXL1Q6ZNB6 911 aa7.32□□□□□ -1.24
CLK1-210ENST00000473565 GAS2L3Q86XJ1 694 aa7.32□□□□□ -1.24
CLK1-210ENST00000473565 SMARCC2Q8TAQ2 1214 aa7.32□□□□□ -1.24
CLK1-210ENST00000473565 SH3RF3Q8TEJ3 882 aaPredicted RBP7.32□□□□□ -1.24
CLK1-210ENST00000473565 ZNF274Q96GC6 653 aaPredicted RBP7.32□□□□□ -1.24
CLK1-210ENST00000473565 LY9Q9HBG7 655 aa7.32□□□□□ -1.24
CLK1-210ENST00000473565 STK32BQ9NY57 414 aa7.32□□□□□ -1.24
CLK1-210ENST00000473565 TFIP11Q9UBB9 837 aaKnown RBP7.32□□□□□ -1.24
CLK1-210ENST00000473565 ATP6V0A2Q9Y487 856 aa7.32□□□□□ -1.24
CLK1-210ENST00000473565 USP17L8P0C7I0 530 aa7.32□□□□□ -1.24
CLK1-210ENST00000473565 NPR1P16066 1061 aa7.32□□□□□ -1.24
CLK1-210ENST00000473565 GTF2IP78347 998 aa7.32□□□□□ -1.24
CLK1-210ENST00000473565 KLHL40Q2TBA0 621 aa7.32□□□□□ -1.24
CLK1-210ENST00000473565 CTR9Q6PD62 1173 aa7.32□□□□□ -1.24
CLK1-210ENST00000473565 CMTR1Q8N1G2 835 aaKnown RBP7.32□□□□□ -1.24
CLK1-210ENST00000473565 FLAD1Q8NFF5 587 aa7.32□□□□□ -1.24
CLK1-210ENST00000473565 IGDCC4Q8TDY8 1250 aa7.32□□□□□ -1.24
CLK1-210ENST00000473565 AIFM3Q96NN9 605 aa7.32□□□□□ -1.24
CLK1-210ENST00000473565 DCP1AQ9NPI6 582 aaPredicted RBP7.32□□□□□ -1.24
CLK1-210ENST00000473565 ZMYM6O95789 1325 aa7.32□□□□□ -1.24
CLK1-210ENST00000473565 LTBP1Q14766 1721 aa7.31□□□□□ -1.24
CLK1-210ENST00000473565 H3BQV1 296 aa7.31□□□□□ -1.24
CLK1-210ENST00000473565 CDC27P30260 824 aa7.31□□□□□ -1.24
CLK1-210ENST00000473565 PDE6BP35913 854 aa7.31□□□□□ -1.24
CLK1-210ENST00000473565 MFSD14BQ5SR56 506 aa7.31□□□□□ -1.24
CLK1-210ENST00000473565 IFFO2Q5TF58 517 aa7.31□□□□□ -1.24
CLK1-210ENST00000473565 SP8Q8IXZ3 490 aa7.31□□□□□ -1.24
CLK1-210ENST00000473565 WDR66Q8TBY9 1149 aa7.31□□□□□ -1.24
CLK1-210ENST00000473565 FBXO41Q8TF61 875 aa7.31□□□□□ -1.24
CLK1-210ENST00000473565 STAG1Q8WVM7 1258 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms