RNA–Protein interactions for RNA: ENST00000470408.5

UBE3C-205, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 5,197 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-205ENST00000470408 TIGD1Q96MW7 591 aa10.78□□□□□ -0.68
UBE3C-205ENST00000470408 NUP88Q99567 741 aaPredicted RBP10.78□□□□□ -0.68
UBE3C-205ENST00000470408 PLVAPQ9BX97 442 aa10.78□□□□□ -0.68
UBE3C-205ENST00000470408 COPRSQ9NQ92 184 aa10.78□□□□□ -0.68
UBE3C-205ENST00000470408 CLIP2Q9UDT6 1046 aa10.78□□□□□ -0.68
UBE3C-205ENST00000470408 F13A1P00488 732 aa10.78□□□□□ -0.68
UBE3C-205ENST00000470408 ADRA2BP18089 450 aa10.78□□□□□ -0.68
UBE3C-205ENST00000470408 PLCD1P51178 756 aa10.78□□□□□ -0.68
UBE3C-205ENST00000470408 TDRD12Q587J7 1177 aaKnown RBP10.78□□□□□ -0.68
UBE3C-205ENST00000470408 NECAB1Q8N987 351 aa10.78□□□□□ -0.68
UBE3C-205ENST00000470408 IQUBQ8NA54 791 aa10.78□□□□□ -0.68
UBE3C-205ENST00000470408 CDC42BPGQ6DT37 1551 aa10.78□□□□□ -0.68
UBE3C-205ENST00000470408 ADGRB3O60242 1522 aa10.78□□□□□ -0.68
UBE3C-205ENST00000470408 CASQ1P31415 396 aa10.78□□□□□ -0.68
UBE3C-205ENST00000470408 GPR162Q16538 588 aa10.78□□□□□ -0.68
UBE3C-205ENST00000470408 CSADQ9Y600 493 aa10.78□□□□□ -0.68
UBE3C-205ENST00000470408 PAFAH1B1P43034 410 aa10.77□□□□□ -0.68
UBE3C-205ENST00000470408 ZNF165P49910 485 aa10.77□□□□□ -0.68
UBE3C-205ENST00000470408 RAB3GAP1Q15042 981 aa10.77□□□□□ -0.68
UBE3C-205ENST00000470408 BEND3Q5T5X7 828 aa10.77□□□□□ -0.68
UBE3C-205ENST00000470408 ALS2CR12Q96Q35 445 aa10.77□□□□□ -0.68
UBE3C-205ENST00000470408 LMTK2Q8IWU2 1503 aa10.77□□□□□ -0.68
UBE3C-205ENST00000470408 PTPDC1A2A3K4 754 aa10.77□□□□□ -0.69
UBE3C-205ENST00000470408 SGSM2O43147 1006 aa10.77□□□□□ -0.69
UBE3C-205ENST00000470408 FAM13AO94988 1023 aa10.77□□□□□ -0.69
UBE3C-205ENST00000470408 NEFHP12036 1026 aa10.77□□□□□ -0.69
UBE3C-205ENST00000470408 RPS6KB1P23443 525 aa10.77□□□□□ -0.69
UBE3C-205ENST00000470408 ARHGEF6Q15052 776 aa10.77□□□□□ -0.69
UBE3C-205ENST00000470408 HAUS3Q68CZ6 603 aa10.77□□□□□ -0.69
UBE3C-205ENST00000470408 LRRC2Q9BYS8 371 aa10.77□□□□□ -0.69
UBE3C-205ENST00000470408 XRCC6P12956 609 aaKnown RBP eCLIP10.77□□□□□ -0.69
UBE3C-205ENST00000470408 SKIDA1Q1XH10 827 aa10.77□□□□□ -0.69
UBE3C-205ENST00000470408 MFSD14BQ5SR56 506 aa10.77□□□□□ -0.69
UBE3C-205ENST00000470408 MICALCLQ6ZW33 695 aa10.77□□□□□ -0.69
UBE3C-205ENST00000470408 SEPT12Q8IYM1 358 aa10.77□□□□□ -0.69
UBE3C-205ENST00000470408 USP26Q9BXU7 913 aa10.77□□□□□ -0.69
UBE3C-205ENST00000470408 ARMT1Q9H993 441 aa10.77□□□□□ -0.69
UBE3C-205ENST00000470408 BCS1LQ9Y276 419 aa10.77□□□□□ -0.69
UBE3C-205ENST00000470408 ATP10DQ9P241 1426 aa10.77□□□□□ -0.69
UBE3C-205ENST00000470408 LIG1P18858 919 aa10.77□□□□□ -0.69
UBE3C-205ENST00000470408 RPL13P26373 211 aaKnown RBP10.77□□□□□ -0.69
UBE3C-205ENST00000470408 ASIC1P78348 528 aa10.77□□□□□ -0.69
UBE3C-205ENST00000470408 KRT25Q7Z3Z0 450 aa10.77□□□□□ -0.69
UBE3C-205ENST00000470408 ZNF594Q96JF6 807 aaPredicted RBP10.77□□□□□ -0.69
UBE3C-205ENST00000470408 TM6SF1Q9BZW5 370 aa10.77□□□□□ -0.69
UBE3C-205ENST00000470408 USP25Q9UHP3 1055 aa10.77□□□□□ -0.69
UBE3C-205ENST00000470408 CDC42BPAQ5VT25 1732 aa10.77□□□□□ -0.69
UBE3C-205ENST00000470408 IBSPP21815 317 aaPredicted RBP10.76□□□□□ -0.69
UBE3C-205ENST00000470408 AK2P54819 239 aa10.76□□□□□ -0.69
UBE3C-205ENST00000470408 USPL1Q5W0Q7 1092 aa10.76□□□□□ -0.69
UBE3C-205ENST00000470408 RAB11FIP4Q86YS3 637 aa10.76□□□□□ -0.69
UBE3C-205ENST00000470408 ZHX1Q9UKY1 873 aaPredicted RBP10.76□□□□□ -0.69
UBE3C-205ENST00000470408 HEG1Q9ULI3 1381 aa10.76□□□□□ -0.69
UBE3C-205ENST00000470408 SLC1A4P43007 532 aa10.76□□□□□ -0.69
UBE3C-205ENST00000470408 LRSAM1Q6UWE0 723 aa10.76□□□□□ -0.69
UBE3C-205ENST00000470408 USP44Q9H0E7 712 aa10.76□□□□□ -0.69
UBE3C-205ENST00000470408 TNS3Q68CZ2 1445 aa10.76□□□□□ -0.69
UBE3C-205ENST00000470408 SPDYE4A6NLX3 237 aa10.76□□□□□ -0.69
UBE3C-205ENST00000470408 ADCY5O95622 1261 aa10.76□□□□□ -0.69
UBE3C-205ENST00000470408 GBP2P32456 591 aaPredicted RBP10.76□□□□□ -0.69
UBE3C-205ENST00000470408 KRT222Q8N1A0 295 aa10.76□□□□□ -0.69
UBE3C-205ENST00000470408 PLCD4Q9BRC7 762 aa10.76□□□□□ -0.69
UBE3C-205ENST00000470408 TTF2Q9UNY4 1162 aaKnown RBP10.76□□□□□ -0.69
UBE3C-205ENST00000470408 JCADQ9P266 1359 aa10.76□□□□□ -0.69
UBE3C-205ENST00000470408 N4BP3O15049 544 aa10.76□□□□□ -0.69
UBE3C-205ENST00000470408 TAF5LO75529 589 aa10.76□□□□□ -0.69
UBE3C-205ENST00000470408 RBM6P78332 1123 aaKnown RBP10.76□□□□□ -0.69
UBE3C-205ENST00000470408 APOBRQ0VD83 1088 aa10.76□□□□□ -0.69
UBE3C-205ENST00000470408 TTC12Q9H892 705 aaPredicted RBP10.76□□□□□ -0.69
UBE3C-205ENST00000470408 AGLP35573 1532 aa10.76□□□□□ -0.69
UBE3C-205ENST00000470408 UNC13BO14795 1591 aa10.76□□□□□ -0.69
UBE3C-205ENST00000470408 OVOS2A0A0G2JMS6 1433 aa10.76□□□□□ -0.69
UBE3C-205ENST00000470408 OVOS2A0A0J9YW53 1432 aa10.76□□□□□ -0.69
UBE3C-205ENST00000470408 OVOS2Q6IE36 1432 aa10.76□□□□□ -0.69
UBE3C-205ENST00000470408 PHACTR2O75167 634 aa10.75□□□□□ -0.69
UBE3C-205ENST00000470408 PRPHP41219 470 aa10.75□□□□□ -0.69
UBE3C-205ENST00000470408 FAM193AP78312 1265 aa10.75□□□□□ -0.69
UBE3C-205ENST00000470408 MSANTD4Q8NCY6 345 aa10.75□□□□□ -0.69
UBE3C-205ENST00000470408 PLEKHF1Q96S99 279 aa10.75□□□□□ -0.69
UBE3C-205ENST00000470408 TAOK3Q9H2K8 898 aa10.75□□□□□ -0.69
UBE3C-205ENST00000470408 SERPINB2P05120 415 aa10.75□□□□□ -0.69
UBE3C-205ENST00000470408 ZSCAN23Q3MJ62 389 aa10.75□□□□□ -0.69
UBE3C-205ENST00000470408 TTLL7Q6ZT98 887 aa10.75□□□□□ -0.69
UBE3C-205ENST00000470408 DDX12PQ92771 950 aa10.75□□□□□ -0.69
UBE3C-205ENST00000470408 LRRC45Q96CN5 670 aa10.75□□□□□ -0.69
UBE3C-205ENST00000470408 CCDC17Q96LX7 622 aa10.75□□□□□ -0.69
UBE3C-205ENST00000470408 TCHPQ9BT92 498 aa10.75□□□□□ -0.69
UBE3C-205ENST00000470408 NAA15Q9BXJ9 866 aaKnown RBP10.75□□□□□ -0.69
UBE3C-205ENST00000470408 USP40Q9NVE5 1235 aa10.75□□□□□ -0.69
UBE3C-205ENST00000470408 BACH1O14867 736 aa10.75□□□□□ -0.69
UBE3C-205ENST00000470408 GTF2IP78347 998 aa10.75□□□□□ -0.69
UBE3C-205ENST00000470408 CCDC65Q8IXS2 484 aa10.75□□□□□ -0.69
UBE3C-205ENST00000470408 SPAG5Q96R06 1193 aa10.75□□□□□ -0.69
UBE3C-205ENST00000470408 AATFQ9NY61 560 aaKnown RBP eCLIP10.75□□□□□ -0.69
UBE3C-205ENST00000470408 SAP30BPQ9UHR5 308 aaKnown RBP10.75□□□□□ -0.69
UBE3C-205ENST00000470408 ZNF532Q9HCE3 1301 aa10.75□□□□□ -0.69
UBE3C-205ENST00000470408 SSH2Q76I76 1423 aa10.75□□□□□ -0.69
UBE3C-205ENST00000470408 SLC27A2O14975 620 aa10.75□□□□□ -0.69
UBE3C-205ENST00000470408 URI1O94763 535 aaPredicted RBP10.75□□□□□ -0.69
UBE3C-205ENST00000470408 LARP6Q9BRS8 491 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms