RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 ADORA1P30542 326 aa17.8■□□□□ 0.44
SNRNP40-203ENST00000463988 TIMM10P62072 90 aa17.8■□□□□ 0.44
SNRNP40-203ENST00000463988 CRHR2Q13324 411 aa17.8■□□□□ 0.44
SNRNP40-203ENST00000463988 DIXDC1Q155Q3 683 aa17.8■□□□□ 0.44
SNRNP40-203ENST00000463988 CDC42EP5Q6NZY7 148 aa17.8■□□□□ 0.44
SNRNP40-203ENST00000463988 ERO1BQ86YB8 467 aa17.8■□□□□ 0.44
SNRNP40-203ENST00000463988 FRAT1Q92837 279 aaPredicted RBP17.8■□□□□ 0.44
SNRNP40-203ENST00000463988 WRNIP1Q96S55 665 aa17.8■□□□□ 0.44
SNRNP40-203ENST00000463988 A0A1B0GUL7 405 aa17.79■□□□□ 0.44
SNRNP40-203ENST00000463988 TFCP2Q12800 502 aa17.79■□□□□ 0.44
SNRNP40-203ENST00000463988 CNKSR2Q8WXI2 1034 aa17.79■□□□□ 0.44
SNRNP40-203ENST00000463988 BRI3BPQ8WY22 251 aa17.79■□□□□ 0.44
SNRNP40-203ENST00000463988 OTUD5Q96G74 571 aa17.79■□□□□ 0.44
SNRNP40-203ENST00000463988 ERO1AQ96HE7 468 aa17.79■□□□□ 0.44
SNRNP40-203ENST00000463988 ZNF341Q9BYN7 854 aa17.79■□□□□ 0.44
SNRNP40-203ENST00000463988 SNCAIPQ9Y6H5 919 aa17.79■□□□□ 0.44
SNRNP40-203ENST00000463988 CCL15-CCL14A0A0B4J2E2 113 aa17.78■□□□□ 0.44
SNRNP40-203ENST00000463988 RASGRF1Q13972 1273 aa17.78■□□□□ 0.44
SNRNP40-203ENST00000463988 MVPQ14764 893 aaKnown RBP17.78■□□□□ 0.44
SNRNP40-203ENST00000463988 CCL15Q16663 113 aa17.78■□□□□ 0.44
SNRNP40-203ENST00000463988 ZKSCAN2Q63HK3 967 aa17.78■□□□□ 0.44
SNRNP40-203ENST00000463988 XAGE2Q96GT9 111 aa17.78■□□□□ 0.44
SNRNP40-203ENST00000463988 USP40Q9NVE5 1235 aa17.78■□□□□ 0.44
SNRNP40-203ENST00000463988 PDE4DIPQ5VU43 2346 aa17.78■□□□□ 0.44
SNRNP40-203ENST00000463988 GAKO14976 1311 aa17.77■□□□□ 0.44
SNRNP40-203ENST00000463988 CETPP11597 493 aa17.77■□□□□ 0.44
SNRNP40-203ENST00000463988 SOX10P56693 466 aa17.77■□□□□ 0.44
SNRNP40-203ENST00000463988 NFIAQ12857 509 aa17.77■□□□□ 0.44
SNRNP40-203ENST00000463988 SPTY2D1Q68D10 685 aaPredicted RBP17.77■□□□□ 0.44
SNRNP40-203ENST00000463988 SLF2Q8IX21 1173 aa17.77■□□□□ 0.44
SNRNP40-203ENST00000463988 ZKSCAN4Q969J2 545 aaPredicted RBP17.77■□□□□ 0.44
SNRNP40-203ENST00000463988 CLUAP1Q96AJ1 413 aa17.77■□□□□ 0.44
SNRNP40-203ENST00000463988 FAM163AQ96GL9 167 aaPredicted RBP17.77■□□□□ 0.44
SNRNP40-203ENST00000463988 ZCCHC17Q9NP64 241 aaKnown RBP17.77■□□□□ 0.44
SNRNP40-203ENST00000463988 ZNF112Q9UJU3 913 aa17.77■□□□□ 0.44
SNRNP40-203ENST00000463988 TNNQ9UQP3 1299 aa17.77■□□□□ 0.44
SNRNP40-203ENST00000463988 HNRNPUQ00839 825 aaKnown RBP eCLIP17.76■□□□□ 0.43
SNRNP40-203ENST00000463988 SP3Q02447 781 aa17.76■□□□□ 0.43
SNRNP40-203ENST00000463988 PPIL2Q13356 520 aa17.76■□□□□ 0.43
SNRNP40-203ENST00000463988 SNAPC2Q13487 334 aa17.76■□□□□ 0.43
SNRNP40-203ENST00000463988 MIGA2Q7L4E1 593 aa17.76■□□□□ 0.43
SNRNP40-203ENST00000463988 OTOP1Q7RTM1 612 aa17.76■□□□□ 0.43
SNRNP40-203ENST00000463988 MIER1Q8N108 512 aa17.76■□□□□ 0.43
SNRNP40-203ENST00000463988 IDI2Q9BXS1 227 aa17.76■□□□□ 0.43
SNRNP40-203ENST00000463988 ZFYVE28Q9HCC9 887 aa17.76■□□□□ 0.43
SNRNP40-203ENST00000463988 FAM198AQ9UFP1 575 aa17.76■□□□□ 0.43
SNRNP40-203ENST00000463988 TRIM17Q9Y577 477 aa17.76■□□□□ 0.43
SNRNP40-203ENST00000463988 PNMA6EA0A0J9YXQ4 647 aa17.75■□□□□ 0.43
SNRNP40-203ENST00000463988 WDHD1O75717 1129 aaPredicted RBP17.75■□□□□ 0.43
SNRNP40-203ENST00000463988 PPATQ06203 517 aa17.75■□□□□ 0.43
SNRNP40-203ENST00000463988 TCP10Q12799 353 aa17.75■□□□□ 0.43
SNRNP40-203ENST00000463988 G3BP1Q13283 466 aaKnown RBP eCLIP17.75■□□□□ 0.43
SNRNP40-203ENST00000463988 DZIP1Q86YF9 867 aaKnown RBP17.75■□□□□ 0.43
SNRNP40-203ENST00000463988 TMEM57Q8N5G2 664 aa17.75■□□□□ 0.43
SNRNP40-203ENST00000463988 IRF6O14896 467 aa17.74■□□□□ 0.43
SNRNP40-203ENST00000463988 ENTPD3O75355 529 aa17.74■□□□□ 0.43
SNRNP40-203ENST00000463988 TAF1CQ15572 869 aaPredicted RBP17.74■□□□□ 0.43
SNRNP40-203ENST00000463988 DIEXFQ68CQ4 756 aaKnown RBP17.74■□□□□ 0.43
SNRNP40-203ENST00000463988 FAM43AQ8N2R8 423 aa17.74■□□□□ 0.43
SNRNP40-203ENST00000463988 NEUROD6Q96NK8 337 aa17.74■□□□□ 0.43
SNRNP40-203ENST00000463988 ABCF2Q9UG63 623 aa17.74■□□□□ 0.43
SNRNP40-203ENST00000463988 TNRC18O15417 2968 aaPredicted RBP17.73■□□□□ 0.43
SNRNP40-203ENST00000463988 INPP5BP32019 993 aa17.73■□□□□ 0.43
SNRNP40-203ENST00000463988 ARHGEF6Q15052 776 aa17.73■□□□□ 0.43
SNRNP40-203ENST00000463988 NOL9Q5SY16 702 aaKnown RBP17.73■□□□□ 0.43
SNRNP40-203ENST00000463988 CD99L2Q8TCZ2 262 aa17.73■□□□□ 0.43
SNRNP40-203ENST00000463988 EFCC1Q9HA90 598 aa17.73■□□□□ 0.43
SNRNP40-203ENST00000463988 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.73■□□□□ 0.43
SNRNP40-203ENST00000463988 MYH2Q9UKX2 1941 aa17.72■□□□□ 0.43
SNRNP40-203ENST00000463988 RFX7Q2KHR2 1363 aa17.72■□□□□ 0.43
SNRNP40-203ENST00000463988 RGS3P49796 1198 aa17.72■□□□□ 0.43
SNRNP40-203ENST00000463988 POLA2Q14181 598 aa17.72■□□□□ 0.43
SNRNP40-203ENST00000463988 GORABQ5T7V8 394 aa17.72■□□□□ 0.43
SNRNP40-203ENST00000463988 ERICH6Q7L0X2 663 aa17.72■□□□□ 0.43
SNRNP40-203ENST00000463988 ZFPM1Q8IX07 1006 aa17.72■□□□□ 0.43
SNRNP40-203ENST00000463988 SPATA5Q8NB90 893 aa17.72■□□□□ 0.43
SNRNP40-203ENST00000463988 SSH3Q8TE77 659 aa17.72■□□□□ 0.43
SNRNP40-203ENST00000463988 GPR108Q9NPR9 543 aa17.72■□□□□ 0.43
SNRNP40-203ENST00000463988 HMG20BQ9P0W2 317 aa17.72■□□□□ 0.43
SNRNP40-203ENST00000463988 KCNH4Q9UQ05 1017 aa17.72■□□□□ 0.43
SNRNP40-203ENST00000463988 PTPN22Q9Y2R2 807 aa17.72■□□□□ 0.43
SNRNP40-203ENST00000463988 MROH7-TTC4A0A0A0MT08 1334 aa17.72■□□□□ 0.43
SNRNP40-203ENST00000463988 ATRNL1Q5VV63 1379 aa17.71■□□□□ 0.43
SNRNP40-203ENST00000463988 GPR75-ASB3A0A0A6YYF3 556 aa17.71■□□□□ 0.43
SNRNP40-203ENST00000463988 BTBD19C9JJ37 291 aa17.71■□□□□ 0.43
SNRNP40-203ENST00000463988 MAP4K4O95819 1239 aaPredicted RBP17.71■□□□□ 0.43
SNRNP40-203ENST00000463988 UQCRFS1P1P0C7P4 283 aa17.71■□□□□ 0.43
SNRNP40-203ENST00000463988 ARID4AP29374 1257 aaPredicted RBP17.71■□□□□ 0.43
SNRNP40-203ENST00000463988 ATP8B2P98198 1209 aa17.71■□□□□ 0.43
SNRNP40-203ENST00000463988 MAP3K10Q02779 954 aa17.71■□□□□ 0.43
SNRNP40-203ENST00000463988 MECOMQ03112 1051 aa17.71■□□□□ 0.43
SNRNP40-203ENST00000463988 AK9Q5TCS8 1911 aa17.7■□□□□ 0.42
SNRNP40-203ENST00000463988 TLR2O60603 784 aa17.7■□□□□ 0.42
SNRNP40-203ENST00000463988 NPM3O75607 178 aaKnown RBP17.7■□□□□ 0.42
SNRNP40-203ENST00000463988 LDHCP07864 332 aa17.7■□□□□ 0.42
SNRNP40-203ENST00000463988 BTDP43251 543 aa17.7■□□□□ 0.42
SNRNP40-203ENST00000463988 GSTO1P78417 241 aa17.7■□□□□ 0.42
SNRNP40-203ENST00000463988 FTSJ3Q8IY81 847 aaKnown RBP17.7■□□□□ 0.42
SNRNP40-203ENST00000463988 PHF20L1A8MW92 1017 aa17.69■□□□□ 0.42
SNRNP40-203ENST00000463988 SH3BP5LQ7L8J4 393 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms