RNA–Protein interactions for RNA: ENST00000463343.1

SF1-212, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-212ENST00000463343 PRAMEF18Q5VWM3 479 aa21.69■■□□□ 1.06
SF1-212ENST00000463343 ARMC9Q7Z3E5 817 aa21.69■■□□□ 1.06
SF1-212ENST00000463343 SNRKQ9NRH2 765 aa21.69■■□□□ 1.06
SF1-212ENST00000463343 SPDYE2BA6NHP3 402 aa21.68■■□□□ 1.06
SF1-212ENST00000463343 IFIT2P09913 472 aaKnown RBP21.68■■□□□ 1.06
SF1-212ENST00000463343 SPDYE6P0CI01 402 aa21.68■■□□□ 1.06
SF1-212ENST00000463343 RBM5P52756 815 aaKnown RBP eCLIP21.68■■□□□ 1.06
SF1-212ENST00000463343 SREBF2Q12772 1141 aa21.68■■□□□ 1.06
SF1-212ENST00000463343 TTLL12Q14166 644 aaPredicted RBP21.68■■□□□ 1.06
SF1-212ENST00000463343 TBC1D9Q6ZT07 1266 aa21.68■■□□□ 1.06
SF1-212ENST00000463343 AOX1Q06278 1338 aa21.68■■□□□ 1.06
SF1-212ENST00000463343 UNCXA6NJT0 531 aa21.67■■□□□ 1.06
SF1-212ENST00000463343 LDHBP07195 334 aaKnown RBP21.67■■□□□ 1.06
SF1-212ENST00000463343 ZNF296Q8WUU4 475 aaPredicted RBP21.67■■□□□ 1.06
SF1-212ENST00000463343 ABCF2Q9UG63 623 aa21.67■■□□□ 1.06
SF1-212ENST00000463343 SCAF8Q9UPN6 1271 aaKnown RBP21.67■■□□□ 1.06
SF1-212ENST00000463343 INHBEP58166 350 aa21.66■■□□□ 1.06
SF1-212ENST00000463343 ZGPATQ8N5A5 531 aaKnown RBP21.66■■□□□ 1.06
SF1-212ENST00000463343 MAST3O60307 1309 aa21.65■■□□□ 1.06
SF1-212ENST00000463343 GPR25O00155 361 aa21.65■■□□□ 1.06
SF1-212ENST00000463343 TBC1D8O95759 1140 aa21.65■■□□□ 1.06
SF1-212ENST00000463343 ZAP70P43403 619 aa21.65■■□□□ 1.06
SF1-212ENST00000463343 MAP3K11Q16584 847 aa21.65■■□□□ 1.06
SF1-212ENST00000463343 SPTY2D1Q68D10 685 aaPredicted RBP21.65■■□□□ 1.06
SF1-212ENST00000463343 HHIPL2Q6UWX4 724 aa21.65■■□□□ 1.06
SF1-212ENST00000463343 TEKT1Q969V4 418 aa21.65■■□□□ 1.06
SF1-212ENST00000463343 HPS5Q9UPZ3 1129 aa21.65■■□□□ 1.06
SF1-212ENST00000463343 ALDH1A1P00352 501 aa21.64■■□□□ 1.05
SF1-212ENST00000463343 IGHDP01880 384 aa21.64■■□□□ 1.05
SF1-212ENST00000463343 CYP2E1P05181 493 aaPredicted RBP21.64■■□□□ 1.05
SF1-212ENST00000463343 DIXDC1Q155Q3 683 aa21.64■■□□□ 1.05
SF1-212ENST00000463343 ZDHHC15Q96MV8 337 aa21.64■■□□□ 1.05
SF1-212ENST00000463343 RWDD1Q9H446 243 aaPredicted RBP21.64■■□□□ 1.05
SF1-212ENST00000463343 PCDH10Q9P2E7 1040 aa21.64■■□□□ 1.05
SF1-212ENST00000463343 PPP2R3BQ9Y5P8 575 aa21.64■■□□□ 1.05
SF1-212ENST00000463343 MYH13Q9UKX3 1938 aa21.64■■□□□ 1.05
SF1-212ENST00000463343 CLRN2A0PK11 232 aa21.63■■□□□ 1.05
SF1-212ENST00000463343 SOX10P56693 466 aa21.63■■□□□ 1.05
SF1-212ENST00000463343 SPRYD7Q5W111 196 aa21.63■■□□□ 1.05
SF1-212ENST00000463343 APOBEC3HQ6NTF7 200 aaKnown RBP21.63■■□□□ 1.05
SF1-212ENST00000463343 ERICH6Q7L0X2 663 aa21.63■■□□□ 1.05
SF1-212ENST00000463343 DEFB129Q9H1M3 183 aa21.63■■□□□ 1.05
SF1-212ENST00000463343 TDRD3Q9H7E2 651 aaKnown RBP21.63■■□□□ 1.05
SF1-212ENST00000463343 ZNF70Q9UC06 446 aaPredicted RBP21.63■■□□□ 1.05
SF1-212ENST00000463343 ZNF384Q8TF68 577 aa21.62■■□□□ 1.05
SF1-212ENST00000463343 GCC1Q96CN9 775 aa21.62■■□□□ 1.05
SF1-212ENST00000463343 NDUFB9Q9Y6M9 179 aa21.62■■□□□ 1.05
SF1-212ENST00000463343 MYO1BO43795 1136 aa21.61■■□□□ 1.05
SF1-212ENST00000463343 MECOMQ03112 1051 aa21.61■■□□□ 1.05
SF1-212ENST00000463343 SPDYE2Q495Y8 402 aa21.61■■□□□ 1.05
SF1-212ENST00000463343 FBXO46Q6PJ61 603 aaPredicted RBP21.61■■□□□ 1.05
SF1-212ENST00000463343 PIH1D3Q9NQM4 214 aaKnown RBP21.61■■□□□ 1.05
SF1-212ENST00000463343 LRP2BPQ9P2M1 347 aa21.61■■□□□ 1.05
SF1-212ENST00000463343 DAGLAQ9Y4D2 1042 aa21.61■■□□□ 1.05
SF1-212ENST00000463343 MANSC4A6NHS7 340 aaPredicted RBP21.6■■□□□ 1.05
SF1-212ENST00000463343 PPP1R12BO60237 982 aaPredicted RBP21.6■■□□□ 1.05
SF1-212ENST00000463343 FKTNO75072 461 aa21.6■■□□□ 1.05
SF1-212ENST00000463343 ZBTB48P10074 688 aaPredicted RBP21.6■■□□□ 1.05
SF1-212ENST00000463343 ATP5JP18859 108 aa21.6■■□□□ 1.05
SF1-212ENST00000463343 ANKRD45Q5TZF3 282 aa21.6■■□□□ 1.05
SF1-212ENST00000463343 DZIP1Q86YF9 867 aaKnown RBP21.6■■□□□ 1.05
SF1-212ENST00000463343 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.6■■□□□ 1.05
SF1-212ENST00000463343 NSUN4Q96CB9 384 aaKnown RBP21.6■■□□□ 1.05
SF1-212ENST00000463343 SLC10A4Q96EP9 437 aa21.6■■□□□ 1.05
SF1-212ENST00000463343 FAM163AQ96GL9 167 aaPredicted RBP21.6■■□□□ 1.05
SF1-212ENST00000463343 RAI14Q9P0K7 980 aa21.6■■□□□ 1.05
SF1-212ENST00000463343 ANGEL1Q9UNK9 670 aaKnown RBP21.6■■□□□ 1.05
SF1-212ENST00000463343 SUPT20HL1Q3ZLR7 823 aa21.59■■□□□ 1.05
SF1-212ENST00000463343 SMC5Q8IY18 1101 aa21.59■■□□□ 1.05
SF1-212ENST00000463343 ANTXR1Q9H6X2 564 aa21.59■■□□□ 1.05
SF1-212ENST00000463343 VEZTQ9HBM0 779 aa21.59■■□□□ 1.05
SF1-212ENST00000463343 GAKO14976 1311 aa21.58■■□□□ 1.05
SF1-212ENST00000463343 ECM29Q5VYK3 1845 aa21.58■■□□□ 1.05
SF1-212ENST00000463343 BOLA2Q9H3K6 86 aa21.58■■□□□ 1.05
SF1-212ENST00000463343 CDC42EP5Q6NZY7 148 aa21.57■■□□□ 1.04
SF1-212ENST00000463343 SLF2Q8IX21 1173 aa21.57■■□□□ 1.04
SF1-212ENST00000463343 OTUD7AQ8TE49 926 aaPredicted RBP21.57■■□□□ 1.04
SF1-212ENST00000463343 ECHDC1Q9NTX5 307 aa21.57■■□□□ 1.04
SF1-212ENST00000463343 LDHCP07864 332 aa21.56■■□□□ 1.04
SF1-212ENST00000463343 CACNB3P54284 484 aa21.56■■□□□ 1.04
SF1-212ENST00000463343 GSTO1P78417 241 aa21.56■■□□□ 1.04
SF1-212ENST00000463343 PRKG1Q13976 671 aa21.56■■□□□ 1.04
SF1-212ENST00000463343 RASA3Q14644 834 aa21.56■■□□□ 1.04
SF1-212ENST00000463343 PRPF38BQ5VTL8 546 aaKnown RBP21.56■■□□□ 1.04
SF1-212ENST00000463343 USP40Q9NVE5 1235 aa21.56■■□□□ 1.04
SF1-212ENST00000463343 LAMB1P07942 1786 aa21.56■■□□□ 1.04
SF1-212ENST00000463343 TCP10L2B9ZVM9 353 aa21.55■■□□□ 1.04
SF1-212ENST00000463343 MKRN3Q13064 507 aaKnown RBP21.55■■□□□ 1.04
SF1-212ENST00000463343 B4GALNT3Q6L9W6 998 aa21.55■■□□□ 1.04
SF1-212ENST00000463343 IFNL1Q8IU54 200 aa21.55■■□□□ 1.04
SF1-212ENST00000463343 EDC3Q96F86 508 aaKnown RBP21.55■■□□□ 1.04
SF1-212ENST00000463343 DNAJC2Q99543 621 aaKnown RBP21.55■■□□□ 1.04
SF1-212ENST00000463343 HAUS7Q99871 368 aa21.55■■□□□ 1.04
SF1-212ENST00000463343 MROH7-TTC4A0A0A0MT08 1334 aa21.55■■□□□ 1.04
SF1-212ENST00000463343 GPR75-ASB3A0A0A6YYF3 556 aa21.54■■□□□ 1.04
SF1-212ENST00000463343 GOLIM4O00461 696 aa21.54■■□□□ 1.04
SF1-212ENST00000463343 IGSF3O75054 1194 aa21.54■■□□□ 1.04
SF1-212ENST00000463343 R3HDMLQ9H3Y0 253 aa21.54■■□□□ 1.04
SF1-212ENST00000463343 ZBTB47Q9UFB7 747 aaPredicted RBP21.54■■□□□ 1.04
SF1-212ENST00000463343 IDH1O75874 414 aaKnown RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms