RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 C17orf99Q6UX52 265 aa13.69□□□□□ -0.22
CBX3-205ENST00000462165 TMOD2Q9NZR1 351 aa13.69□□□□□ -0.22
CBX3-205ENST00000462165 SUGT1Q9Y2Z0 365 aa13.69□□□□□ -0.22
CBX3-205ENST00000462165 UTYO14607 1347 aa13.68□□□□□ -0.22
CBX3-205ENST00000462165 MGAMO43451 1857 aa13.68□□□□□ -0.22
CBX3-205ENST00000462165 H0YGN5 161 aa13.68□□□□□ -0.22
CBX3-205ENST00000462165 FRAT2O75474 233 aaPredicted RBP13.68□□□□□ -0.22
CBX3-205ENST00000462165 PPATQ06203 517 aa13.68□□□□□ -0.22
CBX3-205ENST00000462165 RABL6Q3YEC7 729 aaPredicted RBP13.68□□□□□ -0.22
CBX3-205ENST00000462165 DCAF15Q66K64 600 aa13.68□□□□□ -0.22
CBX3-205ENST00000462165 SLC4A10Q6U841 1118 aa13.68□□□□□ -0.22
CBX3-205ENST00000462165 VGLL2Q8N8G2 317 aa13.68□□□□□ -0.22
CBX3-205ENST00000462165 MAST3O60307 1309 aa13.67□□□□□ -0.22
CBX3-205ENST00000462165 TRIOBPQ9H2D6 2365 aa13.67□□□□□ -0.22
CBX3-205ENST00000462165 PDE8BO95263 885 aa13.67□□□□□ -0.22
CBX3-205ENST00000462165 NBPF7P0C2Y1 421 aaPredicted RBP13.67□□□□□ -0.22
CBX3-205ENST00000462165 LRRC24Q50LG9 513 aa13.67□□□□□ -0.22
CBX3-205ENST00000462165 METTL24Q5JXM2 366 aa13.67□□□□□ -0.22
CBX3-205ENST00000462165 HHIPL2Q6UWX4 724 aa13.67□□□□□ -0.22
CBX3-205ENST00000462165 ANKRD23Q86SG2 305 aa13.67□□□□□ -0.22
CBX3-205ENST00000462165 SHISA4Q96DD7 197 aa13.67□□□□□ -0.22
CBX3-205ENST00000462165 ZNF341Q9BYN7 854 aa13.67□□□□□ -0.22
CBX3-205ENST00000462165 SALL2Q9Y467 1007 aaPredicted RBP13.67□□□□□ -0.22
CBX3-205ENST00000462165 KIF16BQ96L93 1317 aa13.66□□□□□ -0.22
CBX3-205ENST00000462165 ADGRA2Q96PE1 1338 aa13.66□□□□□ -0.22
CBX3-205ENST00000462165 CTGFP29279 349 aa13.66□□□□□ -0.22
CBX3-205ENST00000462165 PSMC4P43686 418 aa13.66□□□□□ -0.22
CBX3-205ENST00000462165 MTFR1Q15390 333 aa13.66□□□□□ -0.22
CBX3-205ENST00000462165 BICC1Q9H694 974 aaKnown RBP13.66□□□□□ -0.22
CBX3-205ENST00000462165 SRRDQ9UH36 339 aa13.66□□□□□ -0.22
CBX3-205ENST00000462165 OSBPP22059 807 aa13.65□□□□□ -0.22
CBX3-205ENST00000462165 HOXD10P28358 340 aa13.65□□□□□ -0.22
CBX3-205ENST00000462165 INPP5BP32019 993 aa13.65□□□□□ -0.22
CBX3-205ENST00000462165 BCAMP50895 628 aa13.65□□□□□ -0.22
CBX3-205ENST00000462165 MIGA2Q7L4E1 593 aa13.65□□□□□ -0.22
CBX3-205ENST00000462165 ANKRD44Q8N8A2 993 aa13.65□□□□□ -0.22
CBX3-205ENST00000462165 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.65□□□□□ -0.22
CBX3-205ENST00000462165 NKX2-3Q8TAU0 364 aa13.65□□□□□ -0.22
CBX3-205ENST00000462165 TRIM47Q96LD4 638 aa13.65□□□□□ -0.22
CBX3-205ENST00000462165 CPA4Q9UI42 421 aa13.65□□□□□ -0.22
CBX3-205ENST00000462165 ZNF112Q9UJU3 913 aa13.65□□□□□ -0.22
CBX3-205ENST00000462165 KCNH4Q9UQ05 1017 aa13.65□□□□□ -0.22
CBX3-205ENST00000462165 PDHXO00330 501 aa13.64□□□□□ -0.23
CBX3-205ENST00000462165 FGFR2P21802 821 aa13.64□□□□□ -0.23
CBX3-205ENST00000462165 GRK4P32298 578 aa13.64□□□□□ -0.23
CBX3-205ENST00000462165 CHRDL2Q6WN34 429 aa13.64□□□□□ -0.23
CBX3-205ENST00000462165 UBE2Q1Q7Z7E8 422 aa13.64□□□□□ -0.23
CBX3-205ENST00000462165 FAM151AQ8WW52 585 aa13.64□□□□□ -0.23
CBX3-205ENST00000462165 MRS2Q9HD23 443 aa13.64□□□□□ -0.23
CBX3-205ENST00000462165 COL6A3P12111 3177 aa13.64□□□□□ -0.23
CBX3-205ENST00000462165 ECM2O94769 699 aaPredicted RBP13.63□□□□□ -0.23
CBX3-205ENST00000462165 FMNL1O95466 1100 aaPredicted RBP13.63□□□□□ -0.23
CBX3-205ENST00000462165 GJB1P08034 283 aa13.63□□□□□ -0.23
CBX3-205ENST00000462165 GJA8P48165 433 aa13.63□□□□□ -0.23
CBX3-205ENST00000462165 MOGSQ13724 837 aa13.63□□□□□ -0.23
CBX3-205ENST00000462165 WDR66Q8TBY9 1149 aa13.63□□□□□ -0.23
CBX3-205ENST00000462165 RAET1EQ8TD07 263 aa13.63□□□□□ -0.23
CBX3-205ENST00000462165 DPF3Q92784 378 aa13.63□□□□□ -0.23
CBX3-205ENST00000462165 MYPNQ86TC9 1320 aa13.63□□□□□ -0.23
CBX3-205ENST00000462165 DOCK2Q92608 1830 aa13.62□□□□□ -0.23
CBX3-205ENST00000462165 IFIT1P09914 478 aaKnown RBP13.62□□□□□ -0.23
CBX3-205ENST00000462165 PUM3Q15397 648 aaKnown RBP13.62□□□□□ -0.23
CBX3-205ENST00000462165 NOL9Q5SY16 702 aaKnown RBP13.62□□□□□ -0.23
CBX3-205ENST00000462165 KLHDC4Q8TBB5 520 aa13.62□□□□□ -0.23
CBX3-205ENST00000462165 RBM27Q9P2N5 1060 aaKnown RBP13.62□□□□□ -0.23
CBX3-205ENST00000462165 PTPRFP10586 1907 aa13.62□□□□□ -0.23
CBX3-205ENST00000462165 BCRP11274 1271 aa13.61□□□□□ -0.23
CBX3-205ENST00000462165 CCL5P13501 91 aa13.61□□□□□ -0.23
CBX3-205ENST00000462165 UBXN2AP68543 259 aa13.61□□□□□ -0.23
CBX3-205ENST00000462165 CDC42EP5Q6NZY7 148 aa13.61□□□□□ -0.23
CBX3-205ENST00000462165 PARK7Q99497 189 aaKnown RBP13.61□□□□□ -0.23
CBX3-205ENST00000462165 HTATIP2Q9BUP3 242 aa13.61□□□□□ -0.23
CBX3-205ENST00000462165 PRO3102Q9H379 93 aa13.61□□□□□ -0.23
CBX3-205ENST00000462165 DAGLAQ9Y4D2 1042 aa13.61□□□□□ -0.23
CBX3-205ENST00000462165 LAMA3Q16787 3333 aa13.6□□□□□ -0.23
CBX3-205ENST00000462165 CXCL11O14625 94 aa13.6□□□□□ -0.23
CBX3-205ENST00000462165 TCP10Q12799 353 aa13.6□□□□□ -0.23
CBX3-205ENST00000462165 NFIAQ12857 509 aa13.6□□□□□ -0.23
CBX3-205ENST00000462165 GPAT2Q6NUI2 795 aa13.6□□□□□ -0.23
CBX3-205ENST00000462165 LPIN2Q92539 896 aa13.6□□□□□ -0.23
CBX3-205ENST00000462165 RNF208Q9H0X6 261 aa13.6□□□□□ -0.23
CBX3-205ENST00000462165 FAM198AQ9UFP1 575 aa13.6□□□□□ -0.23
CBX3-205ENST00000462165 MYH2Q9UKX2 1941 aa13.6□□□□□ -0.23
CBX3-205ENST00000462165 PHIPQ8WWQ0 1821 aa13.6□□□□□ -0.23
CBX3-205ENST00000462165 SLC5A1P13866 664 aa13.59□□□□□ -0.23
CBX3-205ENST00000462165 ZEB1P37275 1124 aaPredicted RBP13.59□□□□□ -0.23
CBX3-205ENST00000462165 FCGRTP55899 365 aa13.59□□□□□ -0.23
CBX3-205ENST00000462165 PRKCZQ05513 592 aa13.59□□□□□ -0.23
CBX3-205ENST00000462165 MRPL50Q8N5N7 158 aaKnown RBP13.59□□□□□ -0.23
CBX3-205ENST00000462165 SLAIN1Q8ND83 568 aa13.59□□□□□ -0.23
CBX3-205ENST00000462165 BIN2Q9UBW5 565 aaPredicted RBP13.59□□□□□ -0.23
CBX3-205ENST00000462165 PTPRCP08575 1304 aa13.59□□□□□ -0.23
CBX3-205ENST00000462165 EYA2O00167 538 aa13.58□□□□□ -0.24
CBX3-205ENST00000462165 CYP2C8P10632 490 aa13.58□□□□□ -0.24
CBX3-205ENST00000462165 PRDX5P30044 214 aa13.58□□□□□ -0.24
CBX3-205ENST00000462165 RFX5P48382 616 aaPredicted RBP13.58□□□□□ -0.24
CBX3-205ENST00000462165 DIXDC1Q155Q3 683 aa13.58□□□□□ -0.24
CBX3-205ENST00000462165 U2AF1L4Q8WU68 220 aaKnown RBP13.58□□□□□ -0.24
CBX3-205ENST00000462165 USP44Q9H0E7 712 aa13.58□□□□□ -0.24
CBX3-205ENST00000462165 GABRQQ9UN88 632 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms