RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 SNCAIPQ9Y6H5 919 aa23■■□□□ 1.27
UBE2D4-208ENST00000454350 DOCK2Q92608 1830 aa23■■□□□ 1.27
UBE2D4-208ENST00000454350 TFCP2Q12800 502 aa22.99■■□□□ 1.27
UBE2D4-208ENST00000454350 CRHR2Q13324 411 aa22.99■■□□□ 1.27
UBE2D4-208ENST00000454350 RASGRF1Q13972 1273 aa22.99■■□□□ 1.27
UBE2D4-208ENST00000454350 BRI3BPQ8WY22 251 aa22.99■■□□□ 1.27
UBE2D4-208ENST00000454350 FRAT1Q92837 279 aaPredicted RBP22.99■■□□□ 1.27
UBE2D4-208ENST00000454350 CENPFP49454 3210 aa22.98■■□□□ 1.27
UBE2D4-208ENST00000454350 PNMA6EA0A0J9YXQ4 647 aa22.98■■□□□ 1.27
UBE2D4-208ENST00000454350 A0A1B0GUL7 405 aa22.98■■□□□ 1.27
UBE2D4-208ENST00000454350 SPDYE5A6NIY4 337 aa22.98■■□□□ 1.27
UBE2D4-208ENST00000454350 LDHBP07195 334 aaKnown RBP22.98■■□□□ 1.27
UBE2D4-208ENST00000454350 SOX10P56693 466 aa22.98■■□□□ 1.27
UBE2D4-208ENST00000454350 CAP1Q01518 475 aa22.98■■□□□ 1.27
UBE2D4-208ENST00000454350 NFIAQ12857 509 aa22.98■■□□□ 1.27
UBE2D4-208ENST00000454350 FBXO46Q6PJ61 603 aaPredicted RBP22.98■■□□□ 1.27
UBE2D4-208ENST00000454350 FAM151AQ8WW52 585 aa22.98■■□□□ 1.27
UBE2D4-208ENST00000454350 CLUAP1Q96AJ1 413 aa22.98■■□□□ 1.27
UBE2D4-208ENST00000454350 FAM198AQ9UFP1 575 aa22.98■■□□□ 1.27
UBE2D4-208ENST00000454350 PDS5AQ29RF7 1337 aaKnown RBP22.98■■□□□ 1.27
UBE2D4-208ENST00000454350 ZKSCAN4Q969J2 545 aaPredicted RBP22.97■■□□□ 1.27
UBE2D4-208ENST00000454350 XAGE2Q96GT9 111 aa22.97■■□□□ 1.27
UBE2D4-208ENST00000454350 CSADQ9Y600 493 aa22.97■■□□□ 1.27
UBE2D4-208ENST00000454350 GNAI2P04899 355 aa22.96■■□□□ 1.27
UBE2D4-208ENST00000454350 TMEM57Q8N5G2 664 aa22.96■■□□□ 1.27
UBE2D4-208ENST00000454350 OTUD5Q96G74 571 aa22.96■■□□□ 1.27
UBE2D4-208ENST00000454350 WRNIP1Q96S55 665 aa22.96■■□□□ 1.27
UBE2D4-208ENST00000454350 GAKO14976 1311 aa22.96■■□□□ 1.27
UBE2D4-208ENST00000454350 RFX7Q2KHR2 1363 aa22.96■■□□□ 1.27
UBE2D4-208ENST00000454350 OTUD7BQ6GQQ9 843 aa22.95■■□□□ 1.26
UBE2D4-208ENST00000454350 MIGA2Q7L4E1 593 aa22.95■■□□□ 1.26
UBE2D4-208ENST00000454350 ZFPM1Q8IX07 1006 aa22.95■■□□□ 1.26
UBE2D4-208ENST00000454350 ZNF112Q9UJU3 913 aa22.95■■□□□ 1.26
UBE2D4-208ENST00000454350 MYO5AQ9Y4I1 1855 aaKnown RBP22.94■■□□□ 1.26
UBE2D4-208ENST00000454350 ZSWIM8A7E2V4 1837 aa22.94■■□□□ 1.26
UBE2D4-208ENST00000454350 ATRNL1Q5VV63 1379 aa22.94■■□□□ 1.26
UBE2D4-208ENST00000454350 CCL15-CCL14A0A0B4J2E2 113 aa22.94■■□□□ 1.26
UBE2D4-208ENST00000454350 GTF2A2P52657 109 aa22.94■■□□□ 1.26
UBE2D4-208ENST00000454350 HNRNPUQ00839 825 aaKnown RBP eCLIP22.94■■□□□ 1.26
UBE2D4-208ENST00000454350 TCP10Q12799 353 aa22.94■■□□□ 1.26
UBE2D4-208ENST00000454350 CCL15Q16663 113 aa22.94■■□□□ 1.26
UBE2D4-208ENST00000454350 OTOP1Q7RTM1 612 aa22.94■■□□□ 1.26
UBE2D4-208ENST00000454350 ERO1BQ86YB8 467 aa22.94■■□□□ 1.26
UBE2D4-208ENST00000454350 FAM43AQ8N2R8 423 aa22.94■■□□□ 1.26
UBE2D4-208ENST00000454350 ZNF384Q8TF68 577 aa22.94■■□□□ 1.26
UBE2D4-208ENST00000454350 HOOK2Q96ED9 719 aa22.94■■□□□ 1.26
UBE2D4-208ENST00000454350 USP40Q9NVE5 1235 aa22.94■■□□□ 1.26
UBE2D4-208ENST00000454350 INPP5BP32019 993 aa22.93■■□□□ 1.26
UBE2D4-208ENST00000454350 ZKSCAN2Q63HK3 967 aa22.93■■□□□ 1.26
UBE2D4-208ENST00000454350 DIEXFQ68CQ4 756 aaKnown RBP22.93■■□□□ 1.26
UBE2D4-208ENST00000454350 ZNF341Q9BYN7 854 aa22.93■■□□□ 1.26
UBE2D4-208ENST00000454350 AKAP2Q9Y2D5 859 aa22.93■■□□□ 1.26
UBE2D4-208ENST00000454350 KIAA0100Q14667 2235 aaKnown RBP22.93■■□□□ 1.26
UBE2D4-208ENST00000454350 PTPRFP10586 1907 aa22.92■■□□□ 1.26
UBE2D4-208ENST00000454350 PHIPQ8WWQ0 1821 aa22.92■■□□□ 1.26
UBE2D4-208ENST00000454350 IRF6O14896 467 aa22.92■■□□□ 1.26
UBE2D4-208ENST00000454350 DCAF15Q66K64 600 aa22.92■■□□□ 1.26
UBE2D4-208ENST00000454350 ZGPATQ8N5A5 531 aaKnown RBP22.92■■□□□ 1.26
UBE2D4-208ENST00000454350 FAM163AQ96GL9 167 aaPredicted RBP22.92■■□□□ 1.26
UBE2D4-208ENST00000454350 TRIM17Q9Y577 477 aa22.92■■□□□ 1.26
UBE2D4-208ENST00000454350 RBBP6Q7Z6E9 1792 aaKnown RBP22.91■■□□□ 1.26
UBE2D4-208ENST00000454350 PPIL2Q13356 520 aa22.91■■□□□ 1.26
UBE2D4-208ENST00000454350 POLA2Q14181 598 aa22.91■■□□□ 1.26
UBE2D4-208ENST00000454350 MVPQ14764 893 aaKnown RBP22.91■■□□□ 1.26
UBE2D4-208ENST00000454350 CD99L2Q8TCZ2 262 aa22.91■■□□□ 1.26
UBE2D4-208ENST00000454350 IDI2Q9BXS1 227 aa22.91■■□□□ 1.26
UBE2D4-208ENST00000454350 HMG20BQ9P0W2 317 aa22.91■■□□□ 1.26
UBE2D4-208ENST00000454350 RLBP1P12271 317 aa22.9■■□□□ 1.26
UBE2D4-208ENST00000454350 PI16Q6UXB8 463 aa22.9■■□□□ 1.26
UBE2D4-208ENST00000454350 SH3BP5LQ7L8J4 393 aa22.9■■□□□ 1.26
UBE2D4-208ENST00000454350 ERO1AQ96HE7 468 aa22.9■■□□□ 1.26
UBE2D4-208ENST00000454350 ABCF2Q9UG63 623 aa22.9■■□□□ 1.26
UBE2D4-208ENST00000454350 CDK5RAP2Q96SN8 1893 aa22.9■■□□□ 1.26
UBE2D4-208ENST00000454350 BRCA2P51587 3418 aa22.89■■□□□ 1.26
UBE2D4-208ENST00000454350 WDHD1O75717 1129 aaPredicted RBP22.89■■□□□ 1.25
UBE2D4-208ENST00000454350 SP3Q02447 781 aa22.89■■□□□ 1.25
UBE2D4-208ENST00000454350 BTBD19C9JJ37 291 aa22.88■■□□□ 1.25
UBE2D4-208ENST00000454350 CETPP11597 493 aa22.88■■□□□ 1.25
UBE2D4-208ENST00000454350 ARID4AP29374 1257 aaPredicted RBP22.88■■□□□ 1.25
UBE2D4-208ENST00000454350 RGS3P49796 1198 aa22.88■■□□□ 1.25
UBE2D4-208ENST00000454350 MECOMQ03112 1051 aa22.88■■□□□ 1.25
UBE2D4-208ENST00000454350 PPATQ06203 517 aa22.88■■□□□ 1.25
UBE2D4-208ENST00000454350 TAF1CQ15572 869 aaPredicted RBP22.88■■□□□ 1.25
UBE2D4-208ENST00000454350 NOL9Q5SY16 702 aaKnown RBP22.88■■□□□ 1.25
UBE2D4-208ENST00000454350 SSH3Q8TE77 659 aa22.88■■□□□ 1.25
UBE2D4-208ENST00000454350 NEUROD6Q96NK8 337 aa22.88■■□□□ 1.25
UBE2D4-208ENST00000454350 DDX4Q9NQI0 724 aaKnown RBP22.88■■□□□ 1.25
UBE2D4-208ENST00000454350 DOCK1Q14185 1865 aa22.88■■□□□ 1.25
UBE2D4-208ENST00000454350 MROH7-TTC4A0A0A0MT08 1334 aa22.87■■□□□ 1.25
UBE2D4-208ENST00000454350 PHF20L1A8MW92 1017 aa22.87■■□□□ 1.25
UBE2D4-208ENST00000454350 ENTPD3O75355 529 aa22.87■■□□□ 1.25
UBE2D4-208ENST00000454350 RHBDL3P58872 404 aa22.87■■□□□ 1.25
UBE2D4-208ENST00000454350 MAP3K10Q02779 954 aa22.87■■□□□ 1.25
UBE2D4-208ENST00000454350 SNAPC2Q13487 334 aa22.87■■□□□ 1.25
UBE2D4-208ENST00000454350 DZIP1Q86YF9 867 aaKnown RBP22.87■■□□□ 1.25
UBE2D4-208ENST00000454350 ZCCHC17Q9NP64 241 aaKnown RBP22.87■■□□□ 1.25
UBE2D4-208ENST00000454350 KCNH4Q9UQ05 1017 aa22.87■■□□□ 1.25
UBE2D4-208ENST00000454350 PTPN22Q9Y2R2 807 aa22.87■■□□□ 1.25
UBE2D4-208ENST00000454350 GPR75-ASB3A0A0A6YYF3 556 aa22.86■■□□□ 1.25
UBE2D4-208ENST00000454350 ZBTB7BO15156 539 aaPredicted RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms