RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	VIL1	P09327	827 aa	Known RBP	7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	RPL13	P26373	211 aa	Known RBP	7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	MAP3K9	P80192	1104 aa		7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	MYBPC3	Q14896	1274 aa		7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	KIAA0753	Q2KHM9	967 aa		7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	NANOGNB	Q7Z5D8	188 aa		7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	PRAM1	Q96QH2	718 aa		7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	OSBPL9	Q96SU4	736 aa		7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	GORASP1	Q9BQQ3	440 aa		7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	CORO1B	Q9BR76	489 aa		7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	LRRC27	Q9C0I9	530 aa		7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	BRD8	Q9H0E9	1235 aa		7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	QRICH2	Q9H0J4	1663 aa		7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	DISP3	Q9P2K9	1392 aa		7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	CHD2	O14647	1828 aa	Known RBP	7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	ELP1	O95163	1332 aa		7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	LSM1	O15116	133 aa	Known RBP	7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	VDR	P11473	427 aa		7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	GNAI1	P63096	354 aa		7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	ROR2	Q01974	943 aa	Known RBP	7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	CC2D1A	Q6P1N0	951 aa	Predicted RBP	7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	TLDC1	Q6P9B6	456 aa		7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	SLF2	Q8IX21	1173 aa		7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	RPAP2	Q8IXW5	612 aa	Predicted RBP	7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	SPIRE2	Q8WWL2	714 aa		7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	BHMT	Q93088	406 aa		7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	RBM33	Q96EV2	1170 aa	Known RBP	7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	CCDC85A	Q96PX6	553 aa	Predicted RBP	7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	SEZ6L	Q9BYH1	1024 aa		7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	SLC39A2	Q9NP94	309 aa		7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	PAPOLB	Q9NRJ5	636 aa	Known RBP	7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	TRMT1	Q9NXH9	659 aa	Known RBP	7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	AMOTL2	Q9Y2J4	779 aa		7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329		U3KPZ7	1027 aa	Predicted RBP	7.74	□□□□□ -1.17
TRIM6-205	ENST00000445329	ABCC11	Q96J66	1382 aa		7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	ROBO2	Q9HCK4	1378 aa		7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	DIP2A	Q14689	1571 aa		7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	USP27X	A6NNY8	438 aa		7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	CYP27B1	O15528	508 aa		7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	CREB3	O43889	395 aa		7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	HMMR	O75330	724 aa		7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	CYP2E1	P05181	493 aa	Predicted RBP	7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	ALOX15	P16050	662 aa	Predicted RBP	7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	HOXD11	P31277	338 aa	Predicted RBP	7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	GCLC	P48506	637 aa	Predicted RBP	7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	PACS1	Q6VY07	963 aa		7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	SEPT14	Q6ZU15	432 aa		7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	CNNM3	Q8NE01	707 aa		7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	SLC35B4	Q969S0	331 aa		7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	TRPV5	Q9NQA5	729 aa		7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	BATF3	Q9NR55	127 aa		7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	KNDC1	Q76NI1	1749 aa		7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	NDUFB5	O43674	189 aa		7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	GNAT1	P11488	350 aa		7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	HARS	P12081	509 aa	Known RBP	7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	DMPK	Q09013	629 aa		7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	POSTN	Q15063	836 aa		7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	VPS53	Q5VIR6	699 aa		7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	ZSCAN25	Q6NSZ9	544 aa		7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	MYO1H	Q8N1T3	1032 aa		7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	MAB21L3	Q8N8X9	362 aa		7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	CCDC47	Q96A33	483 aa	Known RBP	7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	CLUAP1	Q96AJ1	413 aa		7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	NACC2	Q96BF6	587 aa		7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	CLIC6	Q96NY7	704 aa		7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	ATP6V0A4	Q9HBG4	840 aa		7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	ARFGAP3	Q9NP61	516 aa		7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	FAN1	Q9Y2M0	1017 aa		7.73	□□□□□ -1.17
TRIM6-205	ENST00000445329	STRCP1	A6NGW2	1772 aa		7.72	□□□□□ -1.17
TRIM6-205	ENST00000445329	EBAG9	O00559	213 aa		7.72	□□□□□ -1.17
TRIM6-205	ENST00000445329	SRGAP3	O43295	1099 aa		7.72	□□□□□ -1.17
TRIM6-205	ENST00000445329	CEP104	O60308	925 aa		7.72	□□□□□ -1.17
TRIM6-205	ENST00000445329	KCNA6	P17658	529 aa		7.72	□□□□□ -1.17
TRIM6-205	ENST00000445329	TRIM21	P19474	475 aa	Known RBP	7.72	□□□□□ -1.17
TRIM6-205	ENST00000445329	BDNF	P23560	247 aa		7.72	□□□□□ -1.17
TRIM6-205	ENST00000445329	CUL3	Q13618	768 aa		7.72	□□□□□ -1.17
TRIM6-205	ENST00000445329	GNPTAB	Q3T906	1256 aa		7.72	□□□□□ -1.17
TRIM6-205	ENST00000445329	LARP1B	Q659C4	914 aa	Known RBP	7.72	□□□□□ -1.17
TRIM6-205	ENST00000445329	MTHFD1L	Q6UB35	978 aa		7.72	□□□□□ -1.17
TRIM6-205	ENST00000445329	TTLL7	Q6ZT98	887 aa		7.72	□□□□□ -1.17
TRIM6-205	ENST00000445329	TMCO5A	Q8N6Q1	288 aa		7.72	□□□□□ -1.17
TRIM6-205	ENST00000445329	CEP112	Q8N8E3	955 aa		7.72	□□□□□ -1.17
TRIM6-205	ENST00000445329	HPS3	Q969F9	1004 aa		7.72	□□□□□ -1.17
TRIM6-205	ENST00000445329	SLC39A3	Q9BRY0	314 aa		7.72	□□□□□ -1.17
TRIM6-205	ENST00000445329	HELLS	Q9NRZ9	838 aa		7.72	□□□□□ -1.17
TRIM6-205	ENST00000445329	NRBP1	Q9UHY1	535 aa		7.72	□□□□□ -1.17
TRIM6-205	ENST00000445329	SPO11	Q9Y5K1	396 aa		7.72	□□□□□ -1.17
TRIM6-205	ENST00000445329	XRN1	Q8IZH2	1706 aa	Known RBP	7.72	□□□□□ -1.17
TRIM6-205	ENST00000445329	ABL1	P00519	1130 aa		7.72	□□□□□ -1.17
TRIM6-205	ENST00000445329	DES	P17661	470 aa		7.72	□□□□□ -1.17
TRIM6-205	ENST00000445329	IL4R	P24394	825 aa		7.72	□□□□□ -1.17
TRIM6-205	ENST00000445329	CCT5	P48643	541 aa		7.72	□□□□□ -1.17
TRIM6-205	ENST00000445329	HDAC4	P56524	1084 aa		7.72	□□□□□ -1.17
TRIM6-205	ENST00000445329	RCN1	Q15293	331 aa		7.72	□□□□□ -1.17
TRIM6-205	ENST00000445329	CCDC150	Q8NCX0	1101 aa		7.72	□□□□□ -1.17
TRIM6-205	ENST00000445329	RBM42	Q9BTD8	480 aa	Known RBP	7.72	□□□□□ -1.17
TRIM6-205	ENST00000445329	KLC4	Q9NSK0	619 aa		7.72	□□□□□ -1.17
TRIM6-205	ENST00000445329	AATF	Q9NY61	560 aa	Known RBP eCLIP	7.72	□□□□□ -1.17
TRIM6-205	ENST00000445329	MAGEC2	Q9UBF1	373 aa	Predicted RBP	7.72	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms