RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 HTATSF1O43719 755 aaKnown RBP4.71□□□□□ -1.66
UBR3-206ENST00000444475 PRR29P0C7W0 189 aa4.71□□□□□ -1.66
UBR3-206ENST00000444475 CNGA1P29973 690 aa4.71□□□□□ -1.66
UBR3-206ENST00000444475 TBX2Q13207 712 aaPredicted RBP4.71□□□□□ -1.66
UBR3-206ENST00000444475 PICALMQ13492 652 aa4.71□□□□□ -1.66
UBR3-206ENST00000444475 EML3Q32P44 896 aa4.71□□□□□ -1.66
UBR3-206ENST00000444475 UPF1Q92900 1129 aaKnown RBP eCLIP4.71□□□□□ -1.66
UBR3-206ENST00000444475 CHMP4CQ96CF2 233 aa4.71□□□□□ -1.66
UBR3-206ENST00000444475 OCSTAMPQ9BR26 566 aa4.71□□□□□ -1.66
UBR3-206ENST00000444475 TRIM8Q9BZR9 551 aa4.71□□□□□ -1.66
UBR3-206ENST00000444475 NCOA5Q9HCD5 579 aaKnown RBP4.71□□□□□ -1.66
UBR3-206ENST00000444475 KCNQ5Q9NR82 932 aa4.71□□□□□ -1.66
UBR3-206ENST00000444475 ABHD14A-ACY1A0A1B0GW23 586 aa4.7□□□□□ -1.66
UBR3-206ENST00000444475 MAP3K13O43283 966 aa4.7□□□□□ -1.66
UBR3-206ENST00000444475 ATP1A2P50993 1020 aa4.7□□□□□ -1.66
UBR3-206ENST00000444475 CALD1Q05682 793 aaKnown RBP4.7□□□□□ -1.66
UBR3-206ENST00000444475 HSP90AA2PQ14568 343 aaPredicted RBP4.7□□□□□ -1.66
UBR3-206ENST00000444475 MAP7D1Q3KQU3 841 aa4.7□□□□□ -1.66
UBR3-206ENST00000444475 KLHL10Q6JEL2 608 aa4.7□□□□□ -1.66
UBR3-206ENST00000444475 MICALL2Q8IY33 904 aa4.7□□□□□ -1.66
UBR3-206ENST00000444475 SAMD14Q8IZD0 417 aaPredicted RBP4.7□□□□□ -1.66
UBR3-206ENST00000444475 RNF217Q8TC41 542 aa4.7□□□□□ -1.66
UBR3-206ENST00000444475 RPGRQ92834 1020 aaKnown RBP4.7□□□□□ -1.66
UBR3-206ENST00000444475 HVCN1Q96D96 273 aa4.7□□□□□ -1.66
UBR3-206ENST00000444475 OSGEPQ9NPF4 335 aa4.7□□□□□ -1.66
UBR3-206ENST00000444475 ADAMTS1Q9UHI8 967 aa4.7□□□□□ -1.66
UBR3-206ENST00000444475 TPCN1Q9ULQ1 816 aa4.7□□□□□ -1.66
UBR3-206ENST00000444475 CHMP3Q9Y3E7 222 aa4.7□□□□□ -1.66
UBR3-206ENST00000444475 PLOD3O60568 738 aa4.7□□□□□ -1.66
UBR3-206ENST00000444475 PDE8AO60658 829 aa4.7□□□□□ -1.66
UBR3-206ENST00000444475 IDEP14735 1019 aa4.7□□□□□ -1.66
UBR3-206ENST00000444475 PPM1FP49593 454 aaPredicted RBP4.7□□□□□ -1.66
UBR3-206ENST00000444475 MAN2A2P49641 1150 aa4.7□□□□□ -1.66
UBR3-206ENST00000444475 CXorf57Q6NSI4 855 aaKnown RBP4.7□□□□□ -1.66
UBR3-206ENST00000444475 LDHAL6AQ6ZMR3 332 aa4.7□□□□□ -1.66
UBR3-206ENST00000444475 RASGRP2Q7LDG7 609 aa4.7□□□□□ -1.66
UBR3-206ENST00000444475 TRIM50Q86XT4 487 aa4.7□□□□□ -1.66
UBR3-206ENST00000444475 DZIP3Q86Y13 1208 aaKnown RBP4.7□□□□□ -1.66
UBR3-206ENST00000444475 SPDYE1Q8NFV5 336 aaPredicted RBP4.7□□□□□ -1.66
UBR3-206ENST00000444475 DHX36Q9H2U1 1008 aaKnown RBP4.7□□□□□ -1.66
UBR3-206ENST00000444475 CNNM2Q9H8M5 875 aa4.7□□□□□ -1.66
UBR3-206ENST00000444475 PLEKHA5Q9HAU0 1116 aa4.7□□□□□ -1.66
UBR3-206ENST00000444475 FAM170AA1A519 330 aa4.7□□□□□ -1.66
UBR3-206ENST00000444475 SETSIPP0DME0 302 aa4.7□□□□□ -1.66
UBR3-206ENST00000444475 U2AF1L5P0DN76 240 aaPredicted RBP4.7□□□□□ -1.66
UBR3-206ENST00000444475 U2AF1Q01081 240 aaKnown RBP eCLIP4.7□□□□□ -1.66
UBR3-206ENST00000444475 MEI1Q5TIA1 1274 aa4.7□□□□□ -1.66
UBR3-206ENST00000444475 SWSAP1Q6NVH7 229 aa4.7□□□□□ -1.66
UBR3-206ENST00000444475 STRA8Q7Z7C7 330 aa4.7□□□□□ -1.66
UBR3-206ENST00000444475 HLA-CQ95604 372 aa4.7□□□□□ -1.66
UBR3-206ENST00000444475 EAF1Q96JC9 268 aaPredicted RBP4.7□□□□□ -1.66
UBR3-206ENST00000444475 TMEM121BQ9BXQ6 578 aaPredicted RBP4.7□□□□□ -1.66
UBR3-206ENST00000444475 BLOC1S4Q9NUP1 217 aa4.7□□□□□ -1.66
UBR3-206ENST00000444475 A0A087WZG4 1122 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 FDX1P10109 184 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 GALNSP34059 522 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 EIF1AXP47813 144 aaKnown RBP4.69□□□□□ -1.66
UBR3-206ENST00000444475 GUCA2AQ02747 115 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 PDE1CQ14123 709 aaPredicted RBP4.69□□□□□ -1.66
UBR3-206ENST00000444475 NAA30Q147X3 362 aaPredicted RBP4.69□□□□□ -1.66
UBR3-206ENST00000444475 PPP2R5BQ15173 497 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 XRRA1Q6P2D8 792 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 UNC5DQ6UXZ4 953 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 LHFPL2Q6ZUX7 228 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 MAATS1Q7Z4T9 603 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 SULF1Q8IWU6 871 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 NIM1KQ8IY84 436 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 PPM1MQ96MI6 270 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 RBSNQ9H1K0 784 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 ZFATQ9P243 1243 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 PHTF1Q9UMS5 762 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 GPR52Q9Y2T5 361 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 PCDHGA10Q9Y5H3 936 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 RFPL3O75679 317 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 RAD52P43351 418 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 PRKG2Q13237 762 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 GPATCH4Q5T3I0 446 aaKnown RBP4.69□□□□□ -1.66
UBR3-206ENST00000444475 WAPLQ7Z5K2 1190 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 ZNF354CQ86Y25 554 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 WDR66Q8TBY9 1149 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 USP33Q8TEY7 942 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 PRKRIP1Q9H875 184 aaPredicted RBP4.69□□□□□ -1.66
UBR3-206ENST00000444475 TCF7L1Q9HCS4 588 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 RCCD1A6NED2 376 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 CCDC85CA6NKD9 419 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 BOLA2-SMG1P6H3BVE0 249 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 TMCC2O75069 709 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 MYCLP1P12525 358 aaPredicted RBP4.69□□□□□ -1.66
UBR3-206ENST00000444475 HOXD10P28358 340 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 PARP10Q53GL7 1025 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 ZC3H12BQ5HYM0 836 aaKnown RBP4.69□□□□□ -1.66
UBR3-206ENST00000444475 OTUD6AQ7L8S5 288 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 FAM169BQ8N8A8 192 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 NKX2-3Q8TAU0 364 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 CHMP7Q8WUX9 453 aaPredicted RBP4.69□□□□□ -1.66
UBR3-206ENST00000444475 SNX21Q969T3 373 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 THAP11Q96EK4 314 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 RSRC1Q96IZ7 334 aaKnown RBP4.69□□□□□ -1.66
UBR3-206ENST00000444475 CFAP53Q96M91 514 aa4.69□□□□□ -1.66
UBR3-206ENST00000444475 SCLT1Q96NL6 688 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms