RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 CYP27B1O15528 508 aa9.12□□□□□ -0.95
R3HDM1-210ENST00000443537 RNMTO43148 476 aaKnown RBP9.12□□□□□ -0.95
R3HDM1-210ENST00000443537 HMGB2P26583 209 aaKnown RBP9.12□□□□□ -0.95
R3HDM1-210ENST00000443537 SH3PXD2AQ5TCZ1 1133 aa9.12□□□□□ -0.95
R3HDM1-210ENST00000443537 MCM10Q7L590 875 aa9.12□□□□□ -0.95
R3HDM1-210ENST00000443537 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.12□□□□□ -0.95
R3HDM1-210ENST00000443537 SLC52A2Q9HAB3 445 aa9.12□□□□□ -0.95
R3HDM1-210ENST00000443537 ANO2Q9NQ90 1003 aa9.12□□□□□ -0.95
R3HDM1-210ENST00000443537 USP35Q9P2H5 1018 aa9.12□□□□□ -0.95
R3HDM1-210ENST00000443537 DACH1Q9UI36 760 aa9.12□□□□□ -0.95
R3HDM1-210ENST00000443537 RCAN3Q9UKA8 241 aa9.12□□□□□ -0.95
R3HDM1-210ENST00000443537 ZNF831Q5JPB2 1677 aa9.12□□□□□ -0.95
R3HDM1-210ENST00000443537 CICQ96RK0 1608 aaPredicted RBP9.12□□□□□ -0.95
R3HDM1-210ENST00000443537 ZNF211Q13398 564 aaPredicted RBP9.11□□□□□ -0.95
R3HDM1-210ENST00000443537 ALDH1L2Q3SY69 923 aa9.11□□□□□ -0.95
R3HDM1-210ENST00000443537 IL17REQ8NFR9 667 aa9.11□□□□□ -0.95
R3HDM1-210ENST00000443537 TIMMDC1Q9NPL8 285 aa9.11□□□□□ -0.95
R3HDM1-210ENST00000443537 MBIPQ9NS73 344 aa9.11□□□□□ -0.95
R3HDM1-210ENST00000443537 TSPYL4Q9UJ04 414 aa9.11□□□□□ -0.95
R3HDM1-210ENST00000443537 SBF2Q86WG5 1849 aa9.1□□□□□ -0.95
R3HDM1-210ENST00000443537 NEFLP07196 543 aa9.1□□□□□ -0.95
R3HDM1-210ENST00000443537 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.1□□□□□ -0.95
R3HDM1-210ENST00000443537 C16orf46Q6P387 395 aa9.1□□□□□ -0.95
R3HDM1-210ENST00000443537 ALDH16A1Q8IZ83 802 aa9.1□□□□□ -0.95
R3HDM1-210ENST00000443537 ZNF295-AS1Q8N0V1 137 aa9.1□□□□□ -0.95
R3HDM1-210ENST00000443537 PHACTR1Q9C0D0 580 aa9.1□□□□□ -0.95
R3HDM1-210ENST00000443537 SENP2Q9HC62 589 aa9.1□□□□□ -0.95
R3HDM1-210ENST00000443537 DNMT3LQ9UJW3 386 aa9.1□□□□□ -0.95
R3HDM1-210ENST00000443537 NHSQ6T4R5 1651 aa9.1□□□□□ -0.95
R3HDM1-210ENST00000443537 KIF16BQ96L93 1317 aa9.09□□□□□ -0.95
R3HDM1-210ENST00000443537 BTBD11A6QL63 1104 aa9.09□□□□□ -0.95
R3HDM1-210ENST00000443537 HIRAP54198 1017 aaPredicted RBP9.09□□□□□ -0.95
R3HDM1-210ENST00000443537 CABP4P57796 275 aa9.09□□□□□ -0.95
R3HDM1-210ENST00000443537 ERICH6BQ5W0A0 696 aa9.09□□□□□ -0.95
R3HDM1-210ENST00000443537 MPRIPQ6WCQ1 1025 aa9.09□□□□□ -0.95
R3HDM1-210ENST00000443537 RNF123Q5XPI4 1314 aa9.08□□□□□ -0.96
R3HDM1-210ENST00000443537 H3BRB1 525 aa9.08□□□□□ -0.96
R3HDM1-210ENST00000443537 TXLNAP40222 546 aa9.08□□□□□ -0.96
R3HDM1-210ENST00000443537 RBM6P78332 1123 aaKnown RBP9.08□□□□□ -0.96
R3HDM1-210ENST00000443537 DCTN1Q14203 1278 aa9.08□□□□□ -0.96
R3HDM1-210ENST00000443537 TWISTNBQ3B726 338 aaPredicted RBP9.08□□□□□ -0.96
R3HDM1-210ENST00000443537 WDR44Q5JSH3 913 aa9.08□□□□□ -0.96
R3HDM1-210ENST00000443537 BICDL1Q6ZP65 573 aa9.08□□□□□ -0.96
R3HDM1-210ENST00000443537 GLYCTKQ8IVS8 523 aa9.08□□□□□ -0.96
R3HDM1-210ENST00000443537 TTC5Q8N0Z6 440 aa9.08□□□□□ -0.96
R3HDM1-210ENST00000443537 DDX54Q8TDD1 881 aaKnown RBP9.08□□□□□ -0.96
R3HDM1-210ENST00000443537 KIFC2Q96AC6 838 aa9.08□□□□□ -0.96
R3HDM1-210ENST00000443537 THUMPD2Q9BTF0 503 aaKnown RBP9.08□□□□□ -0.96
R3HDM1-210ENST00000443537 SAP130Q9H0E3 1048 aa9.08□□□□□ -0.96
R3HDM1-210ENST00000443537 TUT1Q9H6E5 874 aaKnown RBP9.08□□□□□ -0.96
R3HDM1-210ENST00000443537 QTRT2Q9H974 415 aaKnown RBP9.08□□□□□ -0.96
R3HDM1-210ENST00000443537 TMOD3Q9NYL9 352 aa9.08□□□□□ -0.96
R3HDM1-210ENST00000443537 BIN2Q9UBW5 565 aaPredicted RBP9.08□□□□□ -0.96
R3HDM1-210ENST00000443537 LAS1LQ9Y4W2 734 aaKnown RBP9.08□□□□□ -0.96
R3HDM1-210ENST00000443537 DNMT3AQ9Y6K1 912 aaPredicted RBP9.08□□□□□ -0.96
R3HDM1-210ENST00000443537 BRWD3Q6RI45 1802 aa9.08□□□□□ -0.96
R3HDM1-210ENST00000443537 N4BP2Q86UW6 1770 aaPredicted RBP9.07□□□□□ -0.96
R3HDM1-210ENST00000443537 SOBPA7XYQ1 873 aa9.07□□□□□ -0.96
R3HDM1-210ENST00000443537 IPO8O15397 1037 aaKnown RBP9.07□□□□□ -0.96
R3HDM1-210ENST00000443537 EXOSC9Q06265 439 aaKnown RBP9.07□□□□□ -0.96
R3HDM1-210ENST00000443537 MTMR3Q13615 1198 aa9.07□□□□□ -0.96
R3HDM1-210ENST00000443537 RTN1Q16799 776 aa9.07□□□□□ -0.96
R3HDM1-210ENST00000443537 TMCO4Q5TGY1 634 aa9.07□□□□□ -0.96
R3HDM1-210ENST00000443537 ZNF790Q6PG37 636 aa9.07□□□□□ -0.96
R3HDM1-210ENST00000443537 RHPN1Q8TCX5 695 aa9.07□□□□□ -0.96
R3HDM1-210ENST00000443537 HELQQ8TDG4 1101 aa9.07□□□□□ -0.96
R3HDM1-210ENST00000443537 TSR2Q969E8 191 aaKnown RBP9.07□□□□□ -0.96
R3HDM1-210ENST00000443537 LGR6Q9HBX8 967 aa9.07□□□□□ -0.96
R3HDM1-210ENST00000443537 EGFL7Q9UHF1 273 aa9.07□□□□□ -0.96
R3HDM1-210ENST00000443537 HEG1Q9ULI3 1381 aa9.07□□□□□ -0.96
R3HDM1-210ENST00000443537 ERBB4Q15303 1308 aa9.06□□□□□ -0.96
R3HDM1-210ENST00000443537 A0A1B0GTH6 734 aa9.06□□□□□ -0.96
R3HDM1-210ENST00000443537 SOWAHDA6NJG2 315 aa9.06□□□□□ -0.96
R3HDM1-210ENST00000443537 ARSJQ5FYB0 599 aaPredicted RBP9.06□□□□□ -0.96
R3HDM1-210ENST00000443537 COX20Q5RI15 118 aa9.06□□□□□ -0.96
R3HDM1-210ENST00000443537 C1orf53Q5VUE5 145 aa9.06□□□□□ -0.96
R3HDM1-210ENST00000443537 CCDC30Q5VVM6 783 aa9.06□□□□□ -0.96
R3HDM1-210ENST00000443537 POTEAQ6S8J7 498 aa9.06□□□□□ -0.96
R3HDM1-210ENST00000443537 FMNL2Q96PY5 1086 aa9.06□□□□□ -0.96
R3HDM1-210ENST00000443537 GAS2L1Q99501 681 aaPredicted RBP9.06□□□□□ -0.96
R3HDM1-210ENST00000443537 TEX13AQ9BXU3 409 aaPredicted RBP9.06□□□□□ -0.96
R3HDM1-210ENST00000443537 NEUROD4Q9HD90 331 aa9.06□□□□□ -0.96
R3HDM1-210ENST00000443537 ZDHHC3Q9NYG2 299 aa9.06□□□□□ -0.96
R3HDM1-210ENST00000443537 RGPD3A6NKT7 1758 aaPredicted RBP9.06□□□□□ -0.96
R3HDM1-210ENST00000443537 RGPD4Q7Z3J3 1758 aa9.06□□□□□ -0.96
R3HDM1-210ENST00000443537 BTAF1O14981 1849 aa9.05□□□□□ -0.96
R3HDM1-210ENST00000443537 SENP3-EIF4A1A0A087X0R7 540 aa9.05□□□□□ -0.96
R3HDM1-210ENST00000443537 RARSP54136 660 aaKnown RBP9.05□□□□□ -0.96
R3HDM1-210ENST00000443537 EIF4A1P60842 406 aaKnown RBP9.05□□□□□ -0.96
R3HDM1-210ENST00000443537 FKBP4Q02790 459 aaKnown RBP eCLIP9.05□□□□□ -0.96
R3HDM1-210ENST00000443537 SF3B2Q13435 895 aaKnown RBP9.05□□□□□ -0.96
R3HDM1-210ENST00000443537 DGKZQ13574 1117 aa9.05□□□□□ -0.96
R3HDM1-210ENST00000443537 AAMPQ13685 434 aa9.05□□□□□ -0.96
R3HDM1-210ENST00000443537 SND1Q7KZF4 910 aaKnown RBP eCLIP9.05□□□□□ -0.96
R3HDM1-210ENST00000443537 ARHGAP45Q92619 1136 aa9.05□□□□□ -0.96
R3HDM1-210ENST00000443537 SMARCC1Q92922 1105 aaPredicted RBP9.05□□□□□ -0.96
R3HDM1-210ENST00000443537 STK31Q9BXU1 1019 aa9.05□□□□□ -0.96
R3HDM1-210ENST00000443537 GPAMQ9HCL2 828 aa9.05□□□□□ -0.96
R3HDM1-210ENST00000443537 GMPR2Q9P2T1 348 aaKnown RBP9.05□□□□□ -0.96
R3HDM1-210ENST00000443537 KCPQ6ZWJ8 1503 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms