RNA–Protein interactions for RNA: ENST00000435759.6

PTPN7-203, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-203ENST00000435759 USP40Q9NVE5 1235 aa17.01■□□□□ 0.31
PTPN7-203ENST00000435759 TMOD2Q9NZR1 351 aa17.01■□□□□ 0.31
PTPN7-203ENST00000435759 BTBD19C9JJ37 291 aa17■□□□□ 0.31
PTPN7-203ENST00000435759 CT47B1P0C2W7 299 aaPredicted RBP17■□□□□ 0.31
PTPN7-203ENST00000435759 IL15P40933 162 aaPredicted RBP17■□□□□ 0.31
PTPN7-203ENST00000435759 FAM151AQ8WW52 585 aa17■□□□□ 0.31
PTPN7-203ENST00000435759 COPRSQ9NQ92 184 aa17■□□□□ 0.31
PTPN7-203ENST00000435759 FAM198AQ9UFP1 575 aa17■□□□□ 0.31
PTPN7-203ENST00000435759 MAST3O60307 1309 aa16.99■□□□□ 0.31
PTPN7-203ENST00000435759 SLURP2P0DP57 97 aa16.99■□□□□ 0.31
PTPN7-203ENST00000435759 TAF1CQ15572 869 aaPredicted RBP16.99■□□□□ 0.31
PTPN7-203ENST00000435759 CCDC102BQ68D86 513 aa16.99■□□□□ 0.31
PTPN7-203ENST00000435759 INTS3Q68E01 1043 aaKnown RBP16.99■□□□□ 0.31
PTPN7-203ENST00000435759 ERO1BQ86YB8 467 aa16.99■□□□□ 0.31
PTPN7-203ENST00000435759 ZFYVE28Q9HCC9 887 aa16.99■□□□□ 0.31
PTPN7-203ENST00000435759 FBXO3Q9UK99 471 aa16.99■□□□□ 0.31
PTPN7-203ENST00000435759 ECM29Q5VYK3 1845 aa16.98■□□□□ 0.31
PTPN7-203ENST00000435759 BRCA2P51587 3418 aa16.98■□□□□ 0.31
PTPN7-203ENST00000435759 CCER2I3L3R5 266 aa16.98■□□□□ 0.31
PTPN7-203ENST00000435759 BCAR3O75815 825 aa16.98■□□□□ 0.31
PTPN7-203ENST00000435759 LDHBP07195 334 aaKnown RBP16.98■□□□□ 0.31
PTPN7-203ENST00000435759 ZNF341Q9BYN7 854 aa16.98■□□□□ 0.31
PTPN7-203ENST00000435759 ARHGAP39Q9C0H5 1083 aa16.98■□□□□ 0.31
PTPN7-203ENST00000435759 GNL3LQ9NVN8 582 aaKnown RBP16.98■□□□□ 0.31
PTPN7-203ENST00000435759 ZNF112Q9UJU3 913 aa16.98■□□□□ 0.31
PTPN7-203ENST00000435759 CETPP11597 493 aa16.97■□□□□ 0.31
PTPN7-203ENST00000435759 TFCP2Q12800 502 aa16.97■□□□□ 0.31
PTPN7-203ENST00000435759 ARHGAP45Q92619 1136 aa16.97■□□□□ 0.31
PTPN7-203ENST00000435759 DENND2AQ9ULE3 1009 aa16.97■□□□□ 0.31
PTPN7-203ENST00000435759 PDE4DIPQ5VU43 2346 aa16.96■□□□□ 0.31
PTPN7-203ENST00000435759 SRGAP3O43295 1099 aa16.96■□□□□ 0.31
PTPN7-203ENST00000435759 ECM2O94769 699 aaPredicted RBP16.96■□□□□ 0.31
PTPN7-203ENST00000435759 EN2P19622 333 aaPredicted RBP16.96■□□□□ 0.31
PTPN7-203ENST00000435759 PPIL2Q13356 520 aa16.96■□□□□ 0.31
PTPN7-203ENST00000435759 SNAPC2Q13487 334 aa16.96■□□□□ 0.31
PTPN7-203ENST00000435759 DCAF15Q66K64 600 aa16.96■□□□□ 0.31
PTPN7-203ENST00000435759 SH3BP5LQ7L8J4 393 aa16.96■□□□□ 0.31
PTPN7-203ENST00000435759 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.96■□□□□ 0.31
PTPN7-203ENST00000435759 PPATQ06203 517 aa16.95■□□□□ 0.3
PTPN7-203ENST00000435759 MOGSQ13724 837 aa16.95■□□□□ 0.3
PTPN7-203ENST00000435759 RASGRF1Q13972 1273 aa16.95■□□□□ 0.3
PTPN7-203ENST00000435759 ARMC5Q96C12 935 aa16.95■□□□□ 0.3
PTPN7-203ENST00000435759 HOOK2Q96ED9 719 aa16.95■□□□□ 0.3
PTPN7-203ENST00000435759 XAGE2Q96GT9 111 aa16.95■□□□□ 0.3
PTPN7-203ENST00000435759 PTCH2Q9Y6C5 1203 aa16.95■□□□□ 0.3
PTPN7-203ENST00000435759 SALL1Q9NSC2 1324 aa16.95■□□□□ 0.3
PTPN7-203ENST00000435759 A0A1B0GUL7 405 aa16.94■□□□□ 0.3
PTPN7-203ENST00000435759 TLR2O60603 784 aa16.94■□□□□ 0.3
PTPN7-203ENST00000435759 ZNF384Q8TF68 577 aa16.94■□□□□ 0.3
PTPN7-203ENST00000435759 ABCF2Q9UG63 623 aa16.94■□□□□ 0.3
PTPN7-203ENST00000435759 HDAC5Q9UQL6 1122 aa16.94■□□□□ 0.3
PTPN7-203ENST00000435759 PHF20L1A8MW92 1017 aa16.93■□□□□ 0.3
PTPN7-203ENST00000435759 SEMA3EO15041 775 aa16.93■□□□□ 0.3
PTPN7-203ENST00000435759 MYCP01106 439 aaPredicted RBP16.93■□□□□ 0.3
PTPN7-203ENST00000435759 GNAI3P08754 354 aa16.93■□□□□ 0.3
PTPN7-203ENST00000435759 TRIM27P14373 513 aa16.93■□□□□ 0.3
PTPN7-203ENST00000435759 CTGFP29279 349 aa16.93■□□□□ 0.3
PTPN7-203ENST00000435759 RGS3P49796 1198 aa16.93■□□□□ 0.3
PTPN7-203ENST00000435759 PRPF38BQ5VTL8 546 aaKnown RBP16.93■□□□□ 0.3
PTPN7-203ENST00000435759 FRAT1Q92837 279 aaPredicted RBP16.93■□□□□ 0.3
PTPN7-203ENST00000435759 CLUAP1Q96AJ1 413 aa16.93■□□□□ 0.3
PTPN7-203ENST00000435759 NEUROD6Q96NK8 337 aa16.93■□□□□ 0.3
PTPN7-203ENST00000435759 CPA4Q9UI42 421 aa16.93■□□□□ 0.3
PTPN7-203ENST00000435759 OTOFQ9HC10 1997 aa16.93■□□□□ 0.3
PTPN7-203ENST00000435759 PNMA6EA0A0J9YXQ4 647 aa16.92■□□□□ 0.3
PTPN7-203ENST00000435759 MTX1Q13505 466 aa16.92■□□□□ 0.3
PTPN7-203ENST00000435759 C17orf99Q6UX52 265 aa16.92■□□□□ 0.3
PTPN7-203ENST00000435759 PI16Q6UXB8 463 aa16.92■□□□□ 0.3
PTPN7-203ENST00000435759 TBC1D9Q6ZT07 1266 aa16.92■□□□□ 0.3
PTPN7-203ENST00000435759 DDX4Q9NQI0 724 aaKnown RBP16.92■□□□□ 0.3
PTPN7-203ENST00000435759 KCNH4Q9UQ05 1017 aa16.92■□□□□ 0.3
PTPN7-203ENST00000435759 DDTLA6NHG4 134 aaPredicted RBP16.91■□□□□ 0.3
PTPN7-203ENST00000435759 PDHXO00330 501 aa16.91■□□□□ 0.3
PTPN7-203ENST00000435759 ZBTB22O15209 634 aa16.91■□□□□ 0.3
PTPN7-203ENST00000435759 WDHD1O75717 1129 aaPredicted RBP16.91■□□□□ 0.3
PTPN7-203ENST00000435759 LACTBP83111 547 aaPredicted RBP16.91■□□□□ 0.3
PTPN7-203ENST00000435759 GPAT2Q6NUI2 795 aa16.91■□□□□ 0.3
PTPN7-203ENST00000435759 FAM163AQ96GL9 167 aaPredicted RBP16.91■□□□□ 0.3
PTPN7-203ENST00000435759 ZNF333Q96JL9 665 aa16.91■□□□□ 0.3
PTPN7-203ENST00000435759 IDI2Q9BXS1 227 aa16.91■□□□□ 0.3
PTPN7-203ENST00000435759 HMG20BQ9P0W2 317 aa16.91■□□□□ 0.3
PTPN7-203ENST00000435759 GAKO14976 1311 aa16.91■□□□□ 0.3
PTPN7-203ENST00000435759 RPAP1Q9BWH6 1393 aaPredicted RBP16.9■□□□□ 0.3
PTPN7-203ENST00000435759 ARAP2Q8WZ64 1704 aa16.9■□□□□ 0.3
PTPN7-203ENST00000435759 MECOMQ03112 1051 aa16.9■□□□□ 0.3
PTPN7-203ENST00000435759 NOL9Q5SY16 702 aaKnown RBP16.9■□□□□ 0.3
PTPN7-203ENST00000435759 ATF7IPQ6VMQ6 1270 aa16.9■□□□□ 0.3
PTPN7-203ENST00000435759 ANKRD23Q86SG2 305 aa16.9■□□□□ 0.3
PTPN7-203ENST00000435759 SH3TC2Q8TF17 1288 aa16.9■□□□□ 0.3
PTPN7-203ENST00000435759 ZCCHC17Q9NP64 241 aaKnown RBP16.9■□□□□ 0.3
PTPN7-203ENST00000435759 AKAP2Q9Y2D5 859 aa16.9■□□□□ 0.3
PTPN7-203ENST00000435759 ATRNL1Q5VV63 1379 aa16.89■□□□□ 0.3
PTPN7-203ENST00000435759 IPO8O15397 1037 aaKnown RBP16.89■□□□□ 0.29
PTPN7-203ENST00000435759 ENTPD3O75355 529 aa16.89■□□□□ 0.29
PTPN7-203ENST00000435759 GNAI2P04899 355 aa16.89■□□□□ 0.29
PTPN7-203ENST00000435759 BTDP43251 543 aa16.89■□□□□ 0.29
PTPN7-203ENST00000435759 MAP3K10Q02779 954 aa16.89■□□□□ 0.29
PTPN7-203ENST00000435759 PICALMQ13492 652 aa16.89■□□□□ 0.29
PTPN7-203ENST00000435759 DZIP1Q86YF9 867 aaKnown RBP16.89■□□□□ 0.29
PTPN7-203ENST00000435759 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms