RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 HOOK2Q96ED9 719 aa11.48□□□□□ -0.57
NUP50-206ENST00000422489 R3HDMLQ9H3Y0 253 aa11.48□□□□□ -0.57
NUP50-206ENST00000422489 C1orf115Q9H7X2 142 aa11.48□□□□□ -0.57
NUP50-206ENST00000422489 SSC5DA1L4H1 1573 aa11.48□□□□□ -0.57
NUP50-206ENST00000422489 GJA5P36382 358 aa11.47□□□□□ -0.57
NUP50-206ENST00000422489 ATP8B2P98198 1209 aa11.47□□□□□ -0.57
NUP50-206ENST00000422489 FKBP1CQ5VVH2 108 aa11.47□□□□□ -0.57
NUP50-206ENST00000422489 SPTY2D1Q68D10 685 aaPredicted RBP11.47□□□□□ -0.57
NUP50-206ENST00000422489 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.47□□□□□ -0.57
NUP50-206ENST00000422489 FAM83AQ86UY5 434 aa11.47□□□□□ -0.57
NUP50-206ENST00000422489 DZIP1Q86YF9 867 aaKnown RBP11.47□□□□□ -0.57
NUP50-206ENST00000422489 ZGPATQ8N5A5 531 aaKnown RBP11.47□□□□□ -0.57
NUP50-206ENST00000422489 FAM151AQ8WW52 585 aa11.47□□□□□ -0.57
NUP50-206ENST00000422489 DAGLAQ9Y4D2 1042 aa11.47□□□□□ -0.57
NUP50-206ENST00000422489 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.47□□□□□ -0.57
NUP50-206ENST00000422489 ZNF646O15015 1829 aaPredicted RBP11.46□□□□□ -0.57
NUP50-206ENST00000422489 SALL1Q9NSC2 1324 aa11.46□□□□□ -0.57
NUP50-206ENST00000422489 IGF2BP3O00425 579 aaKnown RBP eCLIP11.46□□□□□ -0.57
NUP50-206ENST00000422489 ZBTB7BO15156 539 aaPredicted RBP11.46□□□□□ -0.57
NUP50-206ENST00000422489 FKTNO75072 461 aa11.46□□□□□ -0.57
NUP50-206ENST00000422489 SURF6O75683 361 aaKnown RBP11.46□□□□□ -0.57
NUP50-206ENST00000422489 RASGRF1Q13972 1273 aa11.46□□□□□ -0.57
NUP50-206ENST00000422489 VGLL4Q14135 290 aa11.46□□□□□ -0.57
NUP50-206ENST00000422489 DCAF15Q66K64 600 aa11.46□□□□□ -0.57
NUP50-206ENST00000422489 ERICH6Q7L0X2 663 aa11.46□□□□□ -0.57
NUP50-206ENST00000422489 ZKSCAN4Q969J2 545 aaPredicted RBP11.46□□□□□ -0.57
NUP50-206ENST00000422489 OTUD5Q96G74 571 aa11.46□□□□□ -0.57
NUP50-206ENST00000422489 WRNIP1Q96S55 665 aa11.46□□□□□ -0.57
NUP50-206ENST00000422489 A0A1B0GUL6 1792 aa11.46□□□□□ -0.58
NUP50-206ENST00000422489 ZBED9Q6R2W3 1325 aa11.45□□□□□ -0.58
NUP50-206ENST00000422489 RLBP1P12271 317 aa11.45□□□□□ -0.58
NUP50-206ENST00000422489 NFIAQ12857 509 aa11.45□□□□□ -0.58
NUP50-206ENST00000422489 TBC1D9Q6ZT07 1266 aa11.45□□□□□ -0.58
NUP50-206ENST00000422489 ZSCAN29Q8IWY8 852 aaPredicted RBP11.45□□□□□ -0.58
NUP50-206ENST00000422489 ZFPM1Q8IX07 1006 aa11.45□□□□□ -0.58
NUP50-206ENST00000422489 SLF2Q8IX21 1173 aa11.45□□□□□ -0.58
NUP50-206ENST00000422489 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.45□□□□□ -0.58
NUP50-206ENST00000422489 PTPN18Q99952 460 aa11.45□□□□□ -0.58
NUP50-206ENST00000422489 ZNF341Q9BYN7 854 aa11.45□□□□□ -0.58
NUP50-206ENST00000422489 HMG20BQ9P0W2 317 aa11.45□□□□□ -0.58
NUP50-206ENST00000422489 CCL15-CCL14A0A0B4J2E2 113 aa11.44□□□□□ -0.58
NUP50-206ENST00000422489 GTF2A2P52657 109 aa11.44□□□□□ -0.58
NUP50-206ENST00000422489 POLA2Q14181 598 aa11.44□□□□□ -0.58
NUP50-206ENST00000422489 CCL15Q16663 113 aa11.44□□□□□ -0.58
NUP50-206ENST00000422489 SPATA5Q8NB90 893 aa11.44□□□□□ -0.58
NUP50-206ENST00000422489 PANK1Q8TE04 598 aa11.44□□□□□ -0.58
NUP50-206ENST00000422489 SNRKQ9NRH2 765 aa11.44□□□□□ -0.58
NUP50-206ENST00000422489 RAI14Q9P0K7 980 aa11.44□□□□□ -0.58
NUP50-206ENST00000422489 FAM198AQ9UFP1 575 aa11.44□□□□□ -0.58
NUP50-206ENST00000422489 TESPA1A2RU30 521 aaPredicted RBP11.43□□□□□ -0.58
NUP50-206ENST00000422489 LDHCP07864 332 aa11.43□□□□□ -0.58
NUP50-206ENST00000422489 UQCRFS1P1P0C7P4 283 aa11.43□□□□□ -0.58
NUP50-206ENST00000422489 INPP5BP32019 993 aa11.43□□□□□ -0.58
NUP50-206ENST00000422489 BTDP43251 543 aa11.43□□□□□ -0.58
NUP50-206ENST00000422489 RGS3P49796 1198 aa11.43□□□□□ -0.58
NUP50-206ENST00000422489 MECOMQ03112 1051 aa11.43□□□□□ -0.58
NUP50-206ENST00000422489 PICALMQ13492 652 aa11.43□□□□□ -0.58
NUP50-206ENST00000422489 PKN2Q16513 984 aaKnown RBP11.43□□□□□ -0.58
NUP50-206ENST00000422489 CCDC158Q5M9N0 1113 aa11.43□□□□□ -0.58
NUP50-206ENST00000422489 TTC39AQ5SRH9 613 aa11.43□□□□□ -0.58
NUP50-206ENST00000422489 PI16Q6UXB8 463 aa11.43□□□□□ -0.58
NUP50-206ENST00000422489 ERO1BQ86YB8 467 aa11.43□□□□□ -0.58
NUP50-206ENST00000422489 SSH3Q8TE77 659 aa11.43□□□□□ -0.58
NUP50-206ENST00000422489 BRI3BPQ8WY22 251 aa11.43□□□□□ -0.58
NUP50-206ENST00000422489 CFHR5Q9BXR6 569 aa11.43□□□□□ -0.58
NUP50-206ENST00000422489 LRP2BPQ9P2M1 347 aa11.43□□□□□ -0.58
NUP50-206ENST00000422489 HPS5Q9UPZ3 1129 aa11.43□□□□□ -0.58
NUP50-206ENST00000422489 SNCAIPQ9Y6H5 919 aa11.43□□□□□ -0.58
NUP50-206ENST00000422489 SPDYE5A6NIY4 337 aa11.42□□□□□ -0.58
NUP50-206ENST00000422489 WDHD1O75717 1129 aaPredicted RBP11.42□□□□□ -0.58
NUP50-206ENST00000422489 CETPP11597 493 aa11.42□□□□□ -0.58
NUP50-206ENST00000422489 MS4A1P11836 297 aa11.42□□□□□ -0.58
NUP50-206ENST00000422489 SOX10P56693 466 aa11.42□□□□□ -0.58
NUP50-206ENST00000422489 GSTO1P78417 241 aa11.42□□□□□ -0.58
NUP50-206ENST00000422489 MLLT1Q03111 559 aaPredicted RBP11.42□□□□□ -0.58
NUP50-206ENST00000422489 CRHR2Q13324 411 aa11.42□□□□□ -0.58
NUP50-206ENST00000422489 TAF1CQ15572 869 aaPredicted RBP11.42□□□□□ -0.58
NUP50-206ENST00000422489 TNNI3KQ59H18 835 aa11.42□□□□□ -0.58
NUP50-206ENST00000422489 NOM1Q5C9Z4 860 aaKnown RBP11.42□□□□□ -0.58
NUP50-206ENST00000422489 FAM163AQ96GL9 167 aaPredicted RBP11.42□□□□□ -0.58
NUP50-206ENST00000422489 MS4A4AQ96JQ5 239 aa11.42□□□□□ -0.58
NUP50-206ENST00000422489 DBNDD2Q9BQY9 259 aa11.42□□□□□ -0.58
NUP50-206ENST00000422489 CCDC8Q9H0W5 538 aaPredicted RBP11.42□□□□□ -0.58
NUP50-206ENST00000422489 BCL11AQ9H165 835 aa11.42□□□□□ -0.58
NUP50-206ENST00000422489 ZFYVE28Q9HCC9 887 aa11.42□□□□□ -0.58
NUP50-206ENST00000422489 FPGT-TNNI3KV9GXZ4 949 aa11.42□□□□□ -0.58
NUP50-206ENST00000422489 ZBTB22O15209 634 aa11.41□□□□□ -0.58
NUP50-206ENST00000422489 ENTPD3O75355 529 aa11.41□□□□□ -0.58
NUP50-206ENST00000422489 SNAPC2Q13487 334 aa11.41□□□□□ -0.58
NUP50-206ENST00000422489 FAM43AQ8N2R8 423 aa11.41□□□□□ -0.58
NUP50-206ENST00000422489 CD99L2Q8TCZ2 262 aa11.41□□□□□ -0.58
NUP50-206ENST00000422489 IDI2Q9BXS1 227 aa11.41□□□□□ -0.58
NUP50-206ENST00000422489 GPR108Q9NPR9 543 aa11.41□□□□□ -0.58
NUP50-206ENST00000422489 TRIM17Q9Y577 477 aa11.41□□□□□ -0.58
NUP50-206ENST00000422489 MROH7-TTC4A0A0A0MT08 1334 aa11.4□□□□□ -0.58
NUP50-206ENST00000422489 GAKO14976 1311 aa11.4□□□□□ -0.58
NUP50-206ENST00000422489 PDS5AQ29RF7 1337 aaKnown RBP11.4□□□□□ -0.58
NUP50-206ENST00000422489 CASP8AP2Q9UKL3 1982 aa11.4□□□□□ -0.58
NUP50-206ENST00000422489 GPR75-ASB3A0A0A6YYF3 556 aa11.4□□□□□ -0.58
NUP50-206ENST00000422489 IRF6O14896 467 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms