RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 CCDC178Q5BJE1 867 aa11.27□□□□□ -0.61
CMSS1-201ENST00000421999 RAB34Q9BZG1 259 aa11.27□□□□□ -0.61
CMSS1-201ENST00000421999 PICK1Q9NRD5 415 aa11.27□□□□□ -0.61
CMSS1-201ENST00000421999 MAGEC2Q9UBF1 373 aaPredicted RBP11.27□□□□□ -0.61
CMSS1-201ENST00000421999 MINPP1Q9UNW1 487 aa11.27□□□□□ -0.61
CMSS1-201ENST00000421999 LEMD3Q9Y2U8 911 aa11.27□□□□□ -0.61
CMSS1-201ENST00000421999 SCNN1DP51172 638 aa11.26□□□□□ -0.61
CMSS1-201ENST00000421999 MAPKAPK5Q8IW41 473 aa11.26□□□□□ -0.61
CMSS1-201ENST00000421999 RXRAP19793 462 aa11.26□□□□□ -0.61
CMSS1-201ENST00000421999 GNAQP50148 359 aa11.26□□□□□ -0.61
CMSS1-201ENST00000421999 EZH2Q15910 746 aaKnown RBP11.26□□□□□ -0.61
CMSS1-201ENST00000421999 PDILTQ8N807 584 aa11.26□□□□□ -0.61
CMSS1-201ENST00000421999 TNMDQ9H2S6 317 aa11.26□□□□□ -0.61
CMSS1-201ENST00000421999 PALD1Q9ULE6 856 aa11.26□□□□□ -0.61
CMSS1-201ENST00000421999 MCM4P33991 863 aa11.26□□□□□ -0.61
CMSS1-201ENST00000421999 GSE1Q14687 1217 aa11.26□□□□□ -0.61
CMSS1-201ENST00000421999 ZFYVE27Q5T4F4 411 aa11.26□□□□□ -0.61
CMSS1-201ENST00000421999 HEATR3Q7Z4Q2 680 aa11.26□□□□□ -0.61
CMSS1-201ENST00000421999 CCAR2Q8N163 923 aaKnown RBP11.26□□□□□ -0.61
CMSS1-201ENST00000421999 SNX21Q969T3 373 aa11.26□□□□□ -0.61
CMSS1-201ENST00000421999 PEAK1Q9H792 1746 aa11.26□□□□□ -0.61
CMSS1-201ENST00000421999 UBN2Q6ZU65 1347 aa11.26□□□□□ -0.61
CMSS1-201ENST00000421999 HSPA4P34932 840 aa11.26□□□□□ -0.61
CMSS1-201ENST00000421999 NAP1L1P55209 391 aaKnown RBP11.26□□□□□ -0.61
CMSS1-201ENST00000421999 RASGRF1Q13972 1273 aa11.26□□□□□ -0.61
CMSS1-201ENST00000421999 CEP57L1Q8IYX8 460 aa11.26□□□□□ -0.61
CMSS1-201ENST00000421999 TEKT1Q969V4 418 aa11.26□□□□□ -0.61
CMSS1-201ENST00000421999 KAZALD1Q96I82 304 aa11.26□□□□□ -0.61
CMSS1-201ENST00000421999 PDIA4P13667 645 aaKnown RBP11.25□□□□□ -0.61
CMSS1-201ENST00000421999 TMEM266Q2M3C6 531 aa11.25□□□□□ -0.61
CMSS1-201ENST00000421999 SDR42E1Q8WUS8 393 aa11.25□□□□□ -0.61
CMSS1-201ENST00000421999 NPR1P16066 1061 aa11.25□□□□□ -0.61
CMSS1-201ENST00000421999 CTDSPL2Q05D32 466 aa11.25□□□□□ -0.61
CMSS1-201ENST00000421999 SLFNL1Q499Z3 407 aa11.25□□□□□ -0.61
CMSS1-201ENST00000421999 ATG9AQ7Z3C6 839 aa11.25□□□□□ -0.61
CMSS1-201ENST00000421999 TANGO6Q9C0B7 1094 aa11.25□□□□□ -0.61
CMSS1-201ENST00000421999 DBNDD1Q9H9R9 158 aa11.25□□□□□ -0.61
CMSS1-201ENST00000421999 TFIP11Q9UBB9 837 aaKnown RBP11.25□□□□□ -0.61
CMSS1-201ENST00000421999 NTSR2O95665 410 aa11.25□□□□□ -0.61
CMSS1-201ENST00000421999 HSPD1P10809 573 aaKnown RBP11.25□□□□□ -0.61
CMSS1-201ENST00000421999 TRAF1Q13077 416 aa11.25□□□□□ -0.61
CMSS1-201ENST00000421999 PRR5LQ6MZQ0 368 aa11.25□□□□□ -0.61
CMSS1-201ENST00000421999 ZNF589Q86UQ0 364 aaPredicted RBP11.25□□□□□ -0.61
CMSS1-201ENST00000421999 STX6O43752 255 aa11.24□□□□□ -0.61
CMSS1-201ENST00000421999 TGFBRAP1Q8WUH2 860 aa11.24□□□□□ -0.61
CMSS1-201ENST00000421999 TNPO1Q92973 898 aaKnown RBP11.24□□□□□ -0.61
CMSS1-201ENST00000421999 VTI1AQ96AJ9 217 aa11.24□□□□□ -0.61
CMSS1-201ENST00000421999 BEGAINQ9BUH8 593 aa11.24□□□□□ -0.61
CMSS1-201ENST00000421999 TRIM5Q9C035 493 aa11.24□□□□□ -0.61
CMSS1-201ENST00000421999 PDCL3Q9H2J4 239 aa11.24□□□□□ -0.61
CMSS1-201ENST00000421999 MCAMP43121 646 aa11.24□□□□□ -0.61
CMSS1-201ENST00000421999 FILIP1LQ4L180 1135 aa11.24□□□□□ -0.61
CMSS1-201ENST00000421999 UBA5Q9GZZ9 404 aa11.24□□□□□ -0.61
CMSS1-201ENST00000421999 GDPD2Q9HCC8 539 aa11.24□□□□□ -0.61
CMSS1-201ENST00000421999 USP42Q9H9J4 1324 aaKnown RBP11.24□□□□□ -0.61
CMSS1-201ENST00000421999 USP40Q9NVE5 1235 aa11.24□□□□□ -0.61
CMSS1-201ENST00000421999 BIN2Q9UBW5 565 aaPredicted RBP11.24□□□□□ -0.61
CMSS1-201ENST00000421999 RIPOR2Q9Y4F9 1068 aa11.24□□□□□ -0.61
CMSS1-201ENST00000421999 SMC2O95347 1197 aa11.23□□□□□ -0.61
CMSS1-201ENST00000421999 BAG4O95429 457 aaKnown RBP11.23□□□□□ -0.61
CMSS1-201ENST00000421999 CSF1RP07333 972 aa11.23□□□□□ -0.61
CMSS1-201ENST00000421999 NAPAP54920 295 aa11.23□□□□□ -0.61
CMSS1-201ENST00000421999 R3HDM1Q15032 1099 aaKnown RBP11.23□□□□□ -0.61
CMSS1-201ENST00000421999 TTLL6Q8N841 843 aa11.23□□□□□ -0.61
CMSS1-201ENST00000421999 MASTLQ96GX5 879 aa11.23□□□□□ -0.61
CMSS1-201ENST00000421999 PLA2G12BQ9BX93 195 aa11.23□□□□□ -0.61
CMSS1-201ENST00000421999 PANK2Q9BZ23 570 aa11.23□□□□□ -0.61
CMSS1-201ENST00000421999 USP17L12C9JPN9 530 aa11.23□□□□□ -0.61
CMSS1-201ENST00000421999 USP17L21D6R901 530 aa11.23□□□□□ -0.61
CMSS1-201ENST00000421999 C21orf2O43822 256 aa11.23□□□□□ -0.61
CMSS1-201ENST00000421999 FGAP02671 866 aa11.23□□□□□ -0.61
CMSS1-201ENST00000421999 LIG1P18858 919 aa11.23□□□□□ -0.61
CMSS1-201ENST00000421999 RPS6KB1P23443 525 aa11.23□□□□□ -0.61
CMSS1-201ENST00000421999 ODF2Q5BJF6 829 aa11.23□□□□□ -0.61
CMSS1-201ENST00000421999 FBXO41Q8TF61 875 aa11.23□□□□□ -0.61
CMSS1-201ENST00000421999 MPHOSPH6Q99547 160 aaKnown RBP11.23□□□□□ -0.61
CMSS1-201ENST00000421999 RAD17O75943 681 aa11.23□□□□□ -0.61
CMSS1-201ENST00000421999 DALRD3Q5D0E6 543 aaKnown RBP11.23□□□□□ -0.61
CMSS1-201ENST00000421999 PPP4R3AQ6IN85 833 aa11.23□□□□□ -0.61
CMSS1-201ENST00000421999 SMARCC2Q8TAQ2 1214 aa11.23□□□□□ -0.61
CMSS1-201ENST00000421999 DSCC1Q9BVC3 393 aa11.23□□□□□ -0.61
CMSS1-201ENST00000421999 ZMYM1Q5SVZ6 1142 aa11.23□□□□□ -0.61
CMSS1-201ENST00000421999 SULF1Q8IWU6 871 aa11.23□□□□□ -0.61
CMSS1-201ENST00000421999 ALG1Q9BT22 464 aa11.23□□□□□ -0.61
CMSS1-201ENST00000421999 PIH1D3Q9NQM4 214 aaKnown RBP11.23□□□□□ -0.61
CMSS1-201ENST00000421999 UTYO14607 1347 aa11.23□□□□□ -0.61
CMSS1-201ENST00000421999 PATL2C9JE40 543 aaKnown RBP11.22□□□□□ -0.61
CMSS1-201ENST00000421999 IDEP14735 1019 aa11.22□□□□□ -0.61
CMSS1-201ENST00000421999 UBA7P41226 1012 aa11.22□□□□□ -0.61
CMSS1-201ENST00000421999 UBE3CQ15386 1083 aa11.22□□□□□ -0.61
CMSS1-201ENST00000421999 TMC4Q7Z404 712 aa11.22□□□□□ -0.61
CMSS1-201ENST00000421999 RASEFQ8IZ41 740 aa11.22□□□□□ -0.61
CMSS1-201ENST00000421999 OSBP2Q969R2 916 aa11.22□□□□□ -0.61
CMSS1-201ENST00000421999 SH2D4AQ9H788 454 aa11.22□□□□□ -0.61
CMSS1-201ENST00000421999 TCP11L1Q9NUJ3 509 aa11.22□□□□□ -0.61
CMSS1-201ENST00000421999 ROBO1Q9Y6N7 1651 aa11.22□□□□□ -0.61
CMSS1-201ENST00000421999 LTN1O94822 1766 aa11.22□□□□□ -0.61
CMSS1-201ENST00000421999 TNFAIP1Q13829 316 aa11.22□□□□□ -0.61
CMSS1-201ENST00000421999 PUS7LQ9H0K6 701 aaKnown RBP11.22□□□□□ -0.61
CMSS1-201ENST00000421999 E7EWF7 191 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms