RNA–Protein interactions for RNA: ENST00000418664.2

DSP-202, Transcript of desmoplakin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DSP, Length 7,812 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-202ENST00000418664 PPP2R3AQ06190 1150 aa13.16□□□□□ -0.3
DSP-202ENST00000418664 TRMT10CQ7L0Y3 403 aaKnown RBP13.16□□□□□ -0.3
DSP-202ENST00000418664 PPFIA3O75145 1194 aa13.15□□□□□ -0.3
DSP-202ENST00000418664 TTC4O95801 387 aa13.15□□□□□ -0.3
DSP-202ENST00000418664 PSMC1P62191 440 aaKnown RBP13.15□□□□□ -0.3
DSP-202ENST00000418664 SNCBQ16143 134 aa13.15□□□□□ -0.3
DSP-202ENST00000418664 NBPF20Q3BBV1 942 aa13.15□□□□□ -0.3
DSP-202ENST00000418664 APLFQ8IW19 511 aaPredicted RBP13.15□□□□□ -0.3
DSP-202ENST00000418664 PPWD1Q96BP3 646 aaKnown RBP13.15□□□□□ -0.3
DSP-202ENST00000418664 GRK2P25098 689 aa13.15□□□□□ -0.3
DSP-202ENST00000418664 KRT32Q14532 448 aa13.15□□□□□ -0.3
DSP-202ENST00000418664 ANKRD20A4Q4UJ75 823 aa13.15□□□□□ -0.3
DSP-202ENST00000418664 ANKRD20A8PQ5CZ79 823 aa13.15□□□□□ -0.3
DSP-202ENST00000418664 ANKRD20A2Q5SQ80 823 aa13.15□□□□□ -0.3
DSP-202ENST00000418664 ANKRD20A1Q5TYW2 823 aa13.15□□□□□ -0.3
DSP-202ENST00000418664 GFM2Q969S9 779 aaKnown RBP13.15□□□□□ -0.3
DSP-202ENST00000418664 GEMIN8Q9NWZ8 242 aaKnown RBP13.15□□□□□ -0.3
DSP-202ENST00000418664 KRT75O95678 551 aa13.15□□□□□ -0.3
DSP-202ENST00000418664 SLC8A3P57103 927 aa13.15□□□□□ -0.3
DSP-202ENST00000418664 KCNA1Q09470 495 aa13.15□□□□□ -0.3
DSP-202ENST00000418664 NFE2L2Q16236 605 aa13.15□□□□□ -0.3
DSP-202ENST00000418664 DRC3Q9H069 523 aa13.15□□□□□ -0.3
DSP-202ENST00000418664 KRT15P19012 456 aa13.15□□□□□ -0.3
DSP-202ENST00000418664 PLCB1Q9NQ66 1216 aa13.15□□□□□ -0.3
DSP-202ENST00000418664 NUP155O75694 1391 aa13.14□□□□□ -0.31
DSP-202ENST00000418664 METTL24Q5JXM2 366 aa13.14□□□□□ -0.31
DSP-202ENST00000418664 PPP4R1Q8TF05 950 aa13.14□□□□□ -0.31
DSP-202ENST00000418664 EVI5LQ96CN4 794 aa13.14□□□□□ -0.31
DSP-202ENST00000418664 VEZTQ9HBM0 779 aa13.14□□□□□ -0.31
DSP-202ENST00000418664 STMN3Q9NZ72 180 aa13.14□□□□□ -0.31
DSP-202ENST00000418664 SP4Q02446 784 aa13.14□□□□□ -0.31
DSP-202ENST00000418664 TLK2Q86UE8 772 aa13.14□□□□□ -0.31
DSP-202ENST00000418664 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.14□□□□□ -0.311e-6■■□□□ 14.3
DSP-202ENST00000418664 E2F5Q15329 346 aa13.14□□□□□ -0.31
DSP-202ENST00000418664 GIMAP6Q6P9H5 292 aa13.14□□□□□ -0.31
DSP-202ENST00000418664 CCDC124Q96CT7 223 aaKnown RBP13.14□□□□□ -0.31
DSP-202ENST00000418664 ARMCX6Q7L4S7 300 aa13.14□□□□□ -0.31
DSP-202ENST00000418664 CNGA4Q8IV77 575 aa13.14□□□□□ -0.31
DSP-202ENST00000418664 TEX11Q8IYF3 940 aa13.14□□□□□ -0.31
DSP-202ENST00000418664 CREB3O43889 395 aa13.14□□□□□ -0.31
DSP-202ENST00000418664 GSTA1P08263 222 aa13.14□□□□□ -0.31
DSP-202ENST00000418664 GSTA2P09210 222 aa13.14□□□□□ -0.31
DSP-202ENST00000418664 NEUROG2Q9H2A3 272 aa13.14□□□□□ -0.31
DSP-202ENST00000418664 RPGRIP1LQ68CZ1 1315 aa13.14□□□□□ -0.31
DSP-202ENST00000418664 LPXNO60711 386 aa13.13□□□□□ -0.31
DSP-202ENST00000418664 KRT83P78385 493 aa13.13□□□□□ -0.31
DSP-202ENST00000418664 CTAGE3PQ8IX95 158 aa13.13□□□□□ -0.31
DSP-202ENST00000418664 SYNDIG1LA6NDD5 238 aa13.13□□□□□ -0.31
DSP-202ENST00000418664 HARSP12081 509 aaKnown RBP13.13□□□□□ -0.31
DSP-202ENST00000418664 LIG3P49916 1009 aa13.13□□□□□ -0.31
DSP-202ENST00000418664 DACH2Q96NX9 599 aa13.13□□□□□ -0.31
DSP-202ENST00000418664 SSFA2P28290 1259 aa13.13□□□□□ -0.31
DSP-202ENST00000418664 CCDC186Q7Z3E2 898 aa13.13□□□□□ -0.31
DSP-202ENST00000418664 CATIPQ7Z7H3 387 aa13.13□□□□□ -0.31
DSP-202ENST00000418664 TXLNGQ9NUQ3 528 aa13.13□□□□□ -0.31
DSP-202ENST00000418664 CCDC144BQ3MJ40 725 aa13.13□□□□□ -0.31
DSP-202ENST00000418664 CCDC152Q4G0S7 254 aa13.13□□□□□ -0.31
DSP-202ENST00000418664 GABPB2Q8TAK5 448 aaPredicted RBP13.13□□□□□ -0.31
DSP-202ENST00000418664 NSMCE1Q8WV22 266 aa13.13□□□□□ -0.31
DSP-202ENST00000418664 RPGRQ92834 1020 aaKnown RBP13.13□□□□□ -0.31
DSP-202ENST00000418664 ANO3Q9BYT9 981 aa13.13□□□□□ -0.31
DSP-202ENST00000418664 TOM1L2Q6ZVM7 507 aa13.13□□□□□ -0.31
DSP-202ENST00000418664 SPDYE1Q8NFV5 336 aaPredicted RBP13.13□□□□□ -0.31
DSP-202ENST00000418664 UBA7P41226 1012 aa13.13□□□□□ -0.31
DSP-202ENST00000418664 CAPN11Q9UMQ6 739 aa13.13□□□□□ -0.31
DSP-202ENST00000418664 FAM95CA0A1B0GW59 222 aa13.12□□□□□ -0.31
DSP-202ENST00000418664 ZPR1O75312 459 aa13.12□□□□□ -0.31
DSP-202ENST00000418664 TBC1D8O95759 1140 aa13.12□□□□□ -0.31
DSP-202ENST00000418664 CALM1P0DP23 149 aa13.12□□□□□ -0.31
DSP-202ENST00000418664 CALM2P0DP24 149 aa13.12□□□□□ -0.31
DSP-202ENST00000418664 CALM3P0DP25 149 aa13.12□□□□□ -0.31
DSP-202ENST00000418664 SLC12A2P55011 1212 aa13.12□□□□□ -0.31
DSP-202ENST00000418664 RUNDC1Q96C34 613 aa13.12□□□□□ -0.31
DSP-202ENST00000418664 NRBF2Q96F24 287 aa13.12□□□□□ -0.31
DSP-202ENST00000418664 ANO6Q4KMQ2 910 aa13.12□□□□□ -0.31
DSP-202ENST00000418664 BSPRYQ5W0U4 402 aa13.12□□□□□ -0.31
DSP-202ENST00000418664 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.12□□□□□ -0.31
DSP-202ENST00000418664 NBPF26B4DH59 902 aa13.12□□□□□ -0.31
DSP-202ENST00000418664 NBPF14Q5TI25 921 aa13.12□□□□□ -0.31
DSP-202ENST00000418664 TTC19Q6DKK2 380 aaPredicted RBP13.12□□□□□ -0.31
DSP-202ENST00000418664 NBPF15Q8N660 670 aa13.12□□□□□ -0.31
DSP-202ENST00000418664 FGD4Q96M96 766 aa13.12□□□□□ -0.31
DSP-202ENST00000418664 TRIM56Q9BRZ2 755 aaKnown RBP13.12□□□□□ -0.31
DSP-202ENST00000418664 CEP126Q9P2H0 1117 aa13.12□□□□□ -0.31
DSP-202ENST00000418664 NOD1Q9Y239 953 aa13.12□□□□□ -0.31
DSP-202ENST00000418664 BCAR3O75815 825 aa13.12□□□□□ -0.31
DSP-202ENST00000418664 EVCP57679 992 aa13.12□□□□□ -0.31
DSP-202ENST00000418664 RBSNQ9H1K0 784 aa13.12□□□□□ -0.31
DSP-202ENST00000418664 TSC22D4Q9Y3Q8 395 aa13.12□□□□□ -0.31
DSP-202ENST00000418664 DNAJC6O75061 913 aa13.12□□□□□ -0.31
DSP-202ENST00000418664 TROVE2P10155 538 aaKnown RBP eCLIP13.12□□□□□ -0.314e-18■□□□□ 10.5
DSP-202ENST00000418664 HCLS1P14317 486 aaPredicted RBP13.12□□□□□ -0.31
DSP-202ENST00000418664 GCC1Q96CN9 775 aa13.12□□□□□ -0.31
DSP-202ENST00000418664 CCDC42Q96M95 316 aa13.12□□□□□ -0.31
DSP-202ENST00000418664 DDX19AQ9NUU7 478 aaKnown RBP13.12□□□□□ -0.31
DSP-202ENST00000418664 SCYL1Q96KG9 808 aa13.12□□□□□ -0.31
DSP-202ENST00000418664 TRAPPC10P48553 1259 aa13.12□□□□□ -0.31
DSP-202ENST00000418664 ZSCAN16Q9H4T2 348 aaPredicted RBP13.12□□□□□ -0.31
DSP-202ENST00000418664 SLC12A1Q13621 1099 aa13.11□□□□□ -0.31
DSP-202ENST00000418664 N4BP2L2Q92802 583 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms