RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 GOLGA8FQ08AF8 430 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 GOLGA8DPQ0D2H9 430 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 PRPF4BQ13523 1007 aaKnown RBP5.11□□□□□ -1.59
PTPN13-202ENST00000411767 RPAINQ86UA6 219 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 TRIM42Q8IWZ5 723 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 MGARPQ8TDB4 240 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 NSMCE1Q8WV22 266 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 LRGUKQ96M69 825 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 QKIQ96PU8 341 aaKnown RBP eCLIP5.11□□□□□ -1.59
PTPN13-202ENST00000411767 CHCHD3Q9NX63 227 aaKnown RBP5.11□□□□□ -1.59
PTPN13-202ENST00000411767 STX18Q9P2W9 335 aaKnown RBP5.11□□□□□ -1.59
PTPN13-202ENST00000411767 ZBTB12Q9Y330 459 aaPredicted RBP5.11□□□□□ -1.59
PTPN13-202ENST00000411767 FBXW4P57775 412 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 NUGGCQ68CJ6 796 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 ZNF449Q6P9G9 518 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 UBA5Q9GZZ9 404 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 ING3Q9NXR8 418 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 GMEB1Q9Y692 573 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 SNX4O95219 450 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 SLFN14P0C7P3 912 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 ARHGDIAP52565 204 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 ATN1P54259 1190 aaPredicted RBP5.11□□□□□ -1.59
PTPN13-202ENST00000411767 CEP78Q5JTW2 689 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 KRT73Q86Y46 540 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 SMAP1Q8IYB5 467 aaPredicted RBP5.11□□□□□ -1.59
PTPN13-202ENST00000411767 PSMA8Q8TAA3 256 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 FAM76AQ8TAV0 307 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 MNTQ99583 582 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 POTEFA5A3E0 1075 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 SPARCP09486 303 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 FOSL1P15407 271 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 KRT85P78386 507 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 PDAP1Q13442 181 aaKnown RBP5.1□□□□□ -1.59
PTPN13-202ENST00000411767 KRT72Q14CN4 511 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 KIAA2013Q8IYS2 634 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 ARMC2Q8NEN0 867 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 SH3GL3Q99963 347 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 CLEC4MQ9H2X3 399 aaPredicted RBP5.1□□□□□ -1.59
PTPN13-202ENST00000411767 RIC8AQ9NPQ8 531 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 CCDC7Q96M83 1385 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 MRPS15P82914 257 aaKnown RBP5.1□□□□□ -1.59
PTPN13-202ENST00000411767 ARHGAP4P98171 946 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 AMPD3Q01432 767 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 ZSCAN25Q6NSZ9 544 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 AMOTL2Q9Y2J4 779 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 HGSO14964 777 aaPredicted RBP5.1□□□□□ -1.59
PTPN13-202ENST00000411767 TRIM37O94972 964 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 EIF2S1P05198 315 aaKnown RBP5.1□□□□□ -1.59
PTPN13-202ENST00000411767 SLC4A3P48751 1232 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 COPB1P53618 953 aaKnown RBP5.1□□□□□ -1.59
PTPN13-202ENST00000411767 PLS1Q14651 629 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 HIF1AQ16665 826 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 WASHC4Q2M389 1173 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 TDRD12Q587J7 1177 aaKnown RBP5.1□□□□□ -1.59
PTPN13-202ENST00000411767 TRIM17Q9Y577 477 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 F8W8V4 182 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 SMNDC1O75940 238 aaKnown RBP eCLIP5.1□□□□□ -1.59
PTPN13-202ENST00000411767 HDAC4P56524 1084 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 IQCB1Q15051 598 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 UBE3BQ7Z3V4 1068 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 SYMPKQ92797 1274 aaKnown RBP5.1□□□□□ -1.59
PTPN13-202ENST00000411767 BRF1Q92994 677 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.1□□□□□ -1.59
PTPN13-202ENST00000411767 FKBP14Q9NWM8 211 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 MPP6Q9NZW5 540 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 AAMPQ13685 434 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 TRAF7Q6Q0C0 670 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.1□□□□□ -1.59
PTPN13-202ENST00000411767 IQCDQ96DY2 449 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 TRPC5Q9UL62 973 aaPredicted RBP5.1□□□□□ -1.59
PTPN13-202ENST00000411767 TMEM247A6NEH6 219 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 ORC4O43929 436 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 SERPINB2P05120 415 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 LRPAP1P30533 357 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 KSR2Q6VAB6 950 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 HOMER3Q9NSC5 361 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 SPG7Q9UQ90 795 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 RWDD3Q9Y3V2 267 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 PAXBP1Q9Y5B6 917 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 H0Y626 953 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 CREB3O43889 395 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 GABPB1Q06547 395 aaPredicted RBP5.1□□□□□ -1.59
PTPN13-202ENST00000411767 TP53BP2Q13625 1128 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 NBPF20Q3BBV1 942 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 TMEM259Q4ZIN3 620 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 LRRC49Q8IUZ0 686 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 PPP4R1Q8TF05 950 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 DDI1Q8WTU0 396 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 NUP88Q99567 741 aaPredicted RBP5.1□□□□□ -1.59
PTPN13-202ENST00000411767 STOML2Q9UJZ1 356 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 INTUQ9ULD6 942 aa5.1□□□□□ -1.59
PTPN13-202ENST00000411767 VAV2P52735 878 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 GABPAQ06546 454 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 PPP2R5AQ15172 486 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 PPP1R7Q15435 360 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 NFE2L2Q16236 605 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 SNX30Q5VWJ9 437 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 JADE1Q6IE81 842 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 FAM180AQ6UWF9 173 aa5.09□□□□□ -1.59
PTPN13-202ENST00000411767 NCAPG2Q86XI2 1143 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms