RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 OTUD7BQ6GQQ9 843 aa17.96■□□□□ 0.47
NIF3L1-205ENST00000409588 ARAP2Q8WZ64 1704 aa17.95■□□□□ 0.46
NIF3L1-205ENST00000409588 ZBTB7BO15156 539 aaPredicted RBP17.95■□□□□ 0.46
NIF3L1-205ENST00000409588 IGSF3O75054 1194 aa17.95■□□□□ 0.46
NIF3L1-205ENST00000409588 TFCP2Q12800 502 aa17.95■□□□□ 0.46
NIF3L1-205ENST00000409588 XAGE2Q96GT9 111 aa17.95■□□□□ 0.46
NIF3L1-205ENST00000409588 ABHD8Q96I13 439 aa17.95■□□□□ 0.46
NIF3L1-205ENST00000409588 GPR108Q9NPR9 543 aa17.95■□□□□ 0.46
NIF3L1-205ENST00000409588 AKAP11Q9UKA4 1901 aa17.95■□□□□ 0.46
NIF3L1-205ENST00000409588 CD44P16070 742 aaKnown RBP17.94■□□□□ 0.46
NIF3L1-205ENST00000409588 PHKA1P46020 1223 aa17.94■□□□□ 0.46
NIF3L1-205ENST00000409588 MAP3K9P80192 1104 aa17.94■□□□□ 0.46
NIF3L1-205ENST00000409588 GORABQ5T7V8 394 aa17.94■□□□□ 0.46
NIF3L1-205ENST00000409588 SSH3Q8TE77 659 aa17.94■□□□□ 0.46
NIF3L1-205ENST00000409588 FAM163AQ96GL9 167 aaPredicted RBP17.94■□□□□ 0.46
NIF3L1-205ENST00000409588 NEUROD6Q96NK8 337 aa17.94■□□□□ 0.46
NIF3L1-205ENST00000409588 AOX1Q06278 1338 aa17.94■□□□□ 0.46
NIF3L1-205ENST00000409588 PNMA6EA0A0J9YXQ4 647 aa17.93■□□□□ 0.46
NIF3L1-205ENST00000409588 DCAF15Q66K64 600 aa17.93■□□□□ 0.46
NIF3L1-205ENST00000409588 FAM151AQ8WW52 585 aa17.93■□□□□ 0.46
NIF3L1-205ENST00000409588 WNK4Q96J92 1243 aa17.93■□□□□ 0.46
NIF3L1-205ENST00000409588 TMEM39BQ9GZU3 492 aa17.93■□□□□ 0.46
NIF3L1-205ENST00000409588 CHMP4BQ9H444 224 aaKnown RBP17.93■□□□□ 0.46
NIF3L1-205ENST00000409588 MAP4K4O95819 1239 aaPredicted RBP17.92■□□□□ 0.46
NIF3L1-205ENST00000409588 PKN2Q16513 984 aaKnown RBP17.92■□□□□ 0.46
NIF3L1-205ENST00000409588 ITPRIPQ8IWB1 547 aa17.92■□□□□ 0.46
NIF3L1-205ENST00000409588 TNNQ9UQP3 1299 aa17.92■□□□□ 0.46
NIF3L1-205ENST00000409588 CSADQ9Y600 493 aa17.92■□□□□ 0.46
NIF3L1-205ENST00000409588 RPAP1Q9BWH6 1393 aaPredicted RBP17.91■□□□□ 0.46
NIF3L1-205ENST00000409588 UQCRFS1P1P0C7P4 283 aa17.91■□□□□ 0.46
NIF3L1-205ENST00000409588 PRDX5P30044 214 aa17.91■□□□□ 0.46
NIF3L1-205ENST00000409588 ADORA1P30542 326 aa17.91■□□□□ 0.46
NIF3L1-205ENST00000409588 DGKZQ13574 1117 aa17.91■□□□□ 0.46
NIF3L1-205ENST00000409588 NOP58Q9Y2X3 529 aaKnown RBP17.91■□□□□ 0.46
NIF3L1-205ENST00000409588 DAGLAQ9Y4D2 1042 aa17.91■□□□□ 0.46
NIF3L1-205ENST00000409588 SSC5DA1L4H1 1573 aa17.91■□□□□ 0.46
NIF3L1-205ENST00000409588 TESPA1A2RU30 521 aaPredicted RBP17.9■□□□□ 0.46
NIF3L1-205ENST00000409588 LDHCP07864 332 aa17.9■□□□□ 0.46
NIF3L1-205ENST00000409588 RASGRF1Q13972 1273 aa17.9■□□□□ 0.46
NIF3L1-205ENST00000409588 CDC42EP5Q6NZY7 148 aa17.9■□□□□ 0.46
NIF3L1-205ENST00000409588 IFNL1Q8IU54 200 aa17.9■□□□□ 0.46
NIF3L1-205ENST00000409588 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.9■□□□□ 0.46
NIF3L1-205ENST00000409588 CLMNQ96JQ2 1002 aa17.9■□□□□ 0.46
NIF3L1-205ENST00000409588 MCOLN1Q9GZU1 580 aa17.9■□□□□ 0.46
NIF3L1-205ENST00000409588 USP40Q9NVE5 1235 aa17.9■□□□□ 0.46
NIF3L1-205ENST00000409588 FZD1Q9UP38 647 aa17.9■□□□□ 0.46
NIF3L1-205ENST00000409588 SURF6O75683 361 aaKnown RBP17.89■□□□□ 0.45
NIF3L1-205ENST00000409588 GTF2A2P52657 109 aa17.89■□□□□ 0.45
NIF3L1-205ENST00000409588 GSTO1P78417 241 aa17.89■□□□□ 0.45
NIF3L1-205ENST00000409588 MKRN3Q13064 507 aaKnown RBP17.89■□□□□ 0.45
NIF3L1-205ENST00000409588 CCDC158Q5M9N0 1113 aa17.89■□□□□ 0.45
NIF3L1-205ENST00000409588 LHX8Q68G74 356 aa17.89■□□□□ 0.45
NIF3L1-205ENST00000409588 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.89■□□□□ 0.45
NIF3L1-205ENST00000409588 ERICH6Q7L0X2 663 aa17.89■□□□□ 0.45
NIF3L1-205ENST00000409588 CTU1Q7Z7A3 348 aaKnown RBP17.89■□□□□ 0.45
NIF3L1-205ENST00000409588 DZIP1Q86YF9 867 aaKnown RBP17.89■□□□□ 0.45
NIF3L1-205ENST00000409588 IDI2Q9BXS1 227 aa17.89■□□□□ 0.45
NIF3L1-205ENST00000409588 ABCF2Q9UG63 623 aa17.89■□□□□ 0.45
NIF3L1-205ENST00000409588 GPR25O00155 361 aa17.88■□□□□ 0.45
NIF3L1-205ENST00000409588 ENTPD3O75355 529 aa17.88■□□□□ 0.45
NIF3L1-205ENST00000409588 TBC1D8O95759 1140 aa17.88■□□□□ 0.45
NIF3L1-205ENST00000409588 ARID4AP29374 1257 aaPredicted RBP17.88■□□□□ 0.45
NIF3L1-205ENST00000409588 CACNB3P54284 484 aa17.88■□□□□ 0.45
NIF3L1-205ENST00000409588 OS9Q13438 667 aaPredicted RBP17.88■□□□□ 0.45
NIF3L1-205ENST00000409588 DIXDC1Q155Q3 683 aa17.88■□□□□ 0.45
NIF3L1-205ENST00000409588 SPATA5Q8NB90 893 aa17.88■□□□□ 0.45
NIF3L1-205ENST00000409588 OPTNQ96CV9 577 aa17.88■□□□□ 0.45
NIF3L1-205ENST00000409588 ZNF512BQ96KM6 892 aaPredicted RBP17.88■□□□□ 0.45
NIF3L1-205ENST00000409588 ZNF341Q9BYN7 854 aa17.88■□□□□ 0.45
NIF3L1-205ENST00000409588 GAKO14976 1311 aa17.88■□□□□ 0.45
NIF3L1-205ENST00000409588 CASP8AP2Q9UKL3 1982 aa17.88■□□□□ 0.45
NIF3L1-205ENST00000409588 WDHD1O75717 1129 aaPredicted RBP17.87■□□□□ 0.45
NIF3L1-205ENST00000409588 RLBP1P12271 317 aa17.87■□□□□ 0.45
NIF3L1-205ENST00000409588 HSP90AB4PQ58FF6 505 aa17.87■□□□□ 0.45
NIF3L1-205ENST00000409588 ERO1BQ86YB8 467 aa17.87■□□□□ 0.45
NIF3L1-205ENST00000409588 ELP3Q9H9T3 547 aa17.87■□□□□ 0.45
NIF3L1-205ENST00000409588 HMG20BQ9P0W2 317 aa17.87■□□□□ 0.45
NIF3L1-205ENST00000409588 MYH13Q9UKX3 1938 aa17.87■□□□□ 0.45
NIF3L1-205ENST00000409588 FKTNO75072 461 aa17.86■□□□□ 0.45
NIF3L1-205ENST00000409588 VGLL4Q14135 290 aa17.86■□□□□ 0.45
NIF3L1-205ENST00000409588 ERC1Q8IUD2 1116 aa17.86■□□□□ 0.45
NIF3L1-205ENST00000409588 ZNF296Q8WUU4 475 aaPredicted RBP17.86■□□□□ 0.45
NIF3L1-205ENST00000409588 ZCCHC17Q9NP64 241 aaKnown RBP17.86■□□□□ 0.45
NIF3L1-205ENST00000409588 GPR75-ASB3A0A0A6YYF3 556 aa17.85■□□□□ 0.45
NIF3L1-205ENST00000409588 SPDYE5A6NIY4 337 aa17.85■□□□□ 0.45
NIF3L1-205ENST00000409588 PPATQ06203 517 aa17.85■□□□□ 0.45
NIF3L1-205ENST00000409588 TNNI3KQ59H18 835 aa17.85■□□□□ 0.45
NIF3L1-205ENST00000409588 TMED8Q6PL24 325 aaPredicted RBP17.85■□□□□ 0.45
NIF3L1-205ENST00000409588 RPAP2Q8IXW5 612 aaPredicted RBP17.85■□□□□ 0.45
NIF3L1-205ENST00000409588 MS4A4AQ96JQ5 239 aa17.85■□□□□ 0.45
NIF3L1-205ENST00000409588 WRNIP1Q96S55 665 aa17.85■□□□□ 0.45
NIF3L1-205ENST00000409588 ZNF112Q9UJU3 913 aa17.85■□□□□ 0.45
NIF3L1-205ENST00000409588 DDX19BQ9UMR2 479 aa17.85■□□□□ 0.45
NIF3L1-205ENST00000409588 FPGT-TNNI3KV9GXZ4 949 aa17.85■□□□□ 0.45
NIF3L1-205ENST00000409588 CCDC85CA6NKD9 419 aa17.84■□□□□ 0.45
NIF3L1-205ENST00000409588 MECOMQ03112 1051 aa17.84■□□□□ 0.45
NIF3L1-205ENST00000409588 CDAN1Q8IWY9 1227 aa17.84■□□□□ 0.45
NIF3L1-205ENST00000409588 FAM198AQ9UFP1 575 aa17.84■□□□□ 0.45
NIF3L1-205ENST00000409588 MROH7-TTC4A0A0A0MT08 1334 aa17.83■□□□□ 0.44
NIF3L1-205ENST00000409588 CETPP11597 493 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms