RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 PRIMPOLQ96LW4 560 aa19.09■□□□□ 0.65
PCDHA13-202ENST00000409494 TAF5LO75529 589 aa19.09■□□□□ 0.65
PCDHA13-202ENST00000409494 APBB1IPQ7Z5R6 666 aaPredicted RBP19.09■□□□□ 0.65
PCDHA13-202ENST00000409494 IQUBQ8NA54 791 aa19.09■□□□□ 0.65
PCDHA13-202ENST00000409494 XDHP47989 1333 aa19.09■□□□□ 0.65
PCDHA13-202ENST00000409494 INO80Q9ULG1 1556 aaPredicted RBP19.08■□□□□ 0.65
PCDHA13-202ENST00000409494 RRAGBQ5VZM2 374 aa19.08■□□□□ 0.65
PCDHA13-202ENST00000409494 USPL1Q5W0Q7 1092 aa19.08■□□□□ 0.65
PCDHA13-202ENST00000409494 KLHDC4Q8TBB5 520 aa19.08■□□□□ 0.65
PCDHA13-202ENST00000409494 KRT13P13646 458 aa19.08■□□□□ 0.65
PCDHA13-202ENST00000409494 PRKCSHP14314 528 aaPredicted RBP19.08■□□□□ 0.65
PCDHA13-202ENST00000409494 ZAP70P43403 619 aa19.08■□□□□ 0.65
PCDHA13-202ENST00000409494 ZNF532Q9HCE3 1301 aa19.08■□□□□ 0.65
PCDHA13-202ENST00000409494 ZC3H13Q5T200 1668 aaKnown RBP19.08■□□□□ 0.64
PCDHA13-202ENST00000409494 PDE8BO95263 885 aa19.08■□□□□ 0.64
PCDHA13-202ENST00000409494 ADRA2BP18089 450 aa19.08■□□□□ 0.64
PCDHA13-202ENST00000409494 DCAF15Q66K64 600 aa19.08■□□□□ 0.64
PCDHA13-202ENST00000409494 TRIM47Q96LD4 638 aa19.08■□□□□ 0.64
PCDHA13-202ENST00000409494 CAMSAP1Q5T5Y3 1602 aa19.08■□□□□ 0.64
PCDHA13-202ENST00000409494 OVOS2A0A0G2JMS6 1433 aa19.08■□□□□ 0.64
PCDHA13-202ENST00000409494 OVOS2A0A0J9YW53 1432 aa19.08■□□□□ 0.64
PCDHA13-202ENST00000409494 OVOS2Q6IE36 1432 aa19.08■□□□□ 0.64
PCDHA13-202ENST00000409494 BICDL2A1A5D9 508 aa19.07■□□□□ 0.64
PCDHA13-202ENST00000409494 PLCD1P51178 756 aa19.07■□□□□ 0.64
PCDHA13-202ENST00000409494 DPY19L2Q6NUT2 758 aa19.07■□□□□ 0.64
PCDHA13-202ENST00000409494 C16orf45Q96MC5 204 aaPredicted RBP19.07■□□□□ 0.64
PCDHA13-202ENST00000409494 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.07■□□□□ 0.64
PCDHA13-202ENST00000409494 TCERG1LQ5VWI1 586 aa19.07■□□□□ 0.64
PCDHA13-202ENST00000409494 NUP88Q99567 741 aaPredicted RBP19.07■□□□□ 0.64
PCDHA13-202ENST00000409494 HAUS7Q99871 368 aa19.07■□□□□ 0.64
PCDHA13-202ENST00000409494 UBE3CQ15386 1083 aa19.07■□□□□ 0.64
PCDHA13-202ENST00000409494 EIF3JO75822 258 aaKnown RBP19.07■□□□□ 0.64
PCDHA13-202ENST00000409494 NEBLO76041 1014 aa19.07■□□□□ 0.64
PCDHA13-202ENST00000409494 MCM3P25205 808 aa19.07■□□□□ 0.64
PCDHA13-202ENST00000409494 BRDTQ58F21 947 aaPredicted RBP19.07■□□□□ 0.64
PCDHA13-202ENST00000409494 ZBTB1Q9Y2K1 713 aa19.07■□□□□ 0.64
PCDHA13-202ENST00000409494 B4E1Z4 1266 aa19.06■□□□□ 0.64
PCDHA13-202ENST00000409494 IFI16Q16666 785 aaKnown RBP19.06■□□□□ 0.64
PCDHA13-202ENST00000409494 MFSD14BQ5SR56 506 aa19.06■□□□□ 0.64
PCDHA13-202ENST00000409494 GRIPAP1Q4V328 841 aa19.06■□□□□ 0.64
PCDHA13-202ENST00000409494 AKNAD1Q5T1N1 836 aa19.06■□□□□ 0.64
PCDHA13-202ENST00000409494 SEPT12Q8IYM1 358 aa19.06■□□□□ 0.64
PCDHA13-202ENST00000409494 AS3MTQ9HBK9 375 aa19.06■□□□□ 0.64
PCDHA13-202ENST00000409494 ZNF521Q96K83 1311 aa19.06■□□□□ 0.64
PCDHA13-202ENST00000409494 KIF4AO95239 1232 aa19.06■□□□□ 0.64
PCDHA13-202ENST00000409494 HS2ST1Q7LGA3 356 aa19.06■□□□□ 0.64
PCDHA13-202ENST00000409494 CHMP4BP1P59074 171 aa19.05■□□□□ 0.64
PCDHA13-202ENST00000409494 STAP2Q9UGK3 403 aa19.05■□□□□ 0.64
PCDHA13-202ENST00000409494 JCADQ9P266 1359 aa19.05■□□□□ 0.64
PCDHA13-202ENST00000409494 KRT25Q7Z3Z0 450 aa19.05■□□□□ 0.64
PCDHA13-202ENST00000409494 BICD1Q96G01 975 aa19.05■□□□□ 0.64
PCDHA13-202ENST00000409494 AATFQ9NY61 560 aaKnown RBP eCLIP19.05■□□□□ 0.64
PCDHA13-202ENST00000409494 LEKR1Q6ZMV7 388 aa19.05■□□□□ 0.64
PCDHA13-202ENST00000409494 EHBP1Q8NDI1 1231 aa19.05■□□□□ 0.64
PCDHA13-202ENST00000409494 GOPCQ9HD26 462 aa19.05■□□□□ 0.64
PCDHA13-202ENST00000409494 KCNG1Q9UIX4 513 aa19.05■□□□□ 0.64
PCDHA13-202ENST00000409494 ZBED4O75132 1171 aa19.05■□□□□ 0.64
PCDHA13-202ENST00000409494 CHURC1Q8WUH1 139 aa19.05■□□□□ 0.64
PCDHA13-202ENST00000409494 ASIC1P78348 528 aa19.04■□□□□ 0.64
PCDHA13-202ENST00000409494 TDRD12Q587J7 1177 aaKnown RBP19.04■□□□□ 0.64
PCDHA13-202ENST00000409494 HSPA4P34932 840 aa19.04■□□□□ 0.64
PCDHA13-202ENST00000409494 FAM200AQ8TCP9 573 aa19.04■□□□□ 0.64
PCDHA13-202ENST00000409494 N4BP3O15049 544 aa19.04■□□□□ 0.64
PCDHA13-202ENST00000409494 PLS1Q14651 629 aa19.04■□□□□ 0.64
PCDHA13-202ENST00000409494 SNX14Q9Y5W7 946 aa19.04■□□□□ 0.64
PCDHA13-202ENST00000409494 ZNF804BA4D1E1 1349 aa19.04■□□□□ 0.64
PCDHA13-202ENST00000409494 RPS6KA4O75676 772 aa19.03■□□□□ 0.64
PCDHA13-202ENST00000409494 SERPINB2P05120 415 aa19.03■□□□□ 0.64
PCDHA13-202ENST00000409494 PAFAH1B1P43034 410 aa19.03■□□□□ 0.64
PCDHA13-202ENST00000409494 HAUS3Q68CZ6 603 aa19.03■□□□□ 0.64
PCDHA13-202ENST00000409494 TTF2Q9UNY4 1162 aaKnown RBP19.03■□□□□ 0.64
PCDHA13-202ENST00000409494 SLC1A4P43007 532 aa19.03■□□□□ 0.64
PCDHA13-202ENST00000409494 CBX1P83916 185 aa19.03■□□□□ 0.64
PCDHA13-202ENST00000409494 NOLC1Q14978 699 aaKnown RBP eCLIP19.03■□□□□ 0.64
PCDHA13-202ENST00000409494 ARHGEF40Q8TER5 1519 aa19.03■□□□□ 0.64
PCDHA13-202ENST00000409494 GTF2IP78347 998 aa19.03■□□□□ 0.64
PCDHA13-202ENST00000409494 CHRNDQ07001 517 aa19.03■□□□□ 0.64
PCDHA13-202ENST00000409494 ALS2CR12Q96Q35 445 aa19.03■□□□□ 0.64
PCDHA13-202ENST00000409494 TBC1D5Q92609 795 aa19.03■□□□□ 0.64
PCDHA13-202ENST00000409494 SAP30BPQ9UHR5 308 aaKnown RBP19.03■□□□□ 0.64
PCDHA13-202ENST00000409494 PALLDQ8WX93 1383 aa19.03■□□□□ 0.64
PCDHA13-202ENST00000409494 DNM1Q05193 864 aaKnown RBP19.02■□□□□ 0.64
PCDHA13-202ENST00000409494 ATP8A2Q9NTI2 1148 aa19.02■□□□□ 0.64
PCDHA13-202ENST00000409494 ANKRD62A6NC57 917 aa19.02■□□□□ 0.64
PCDHA13-202ENST00000409494 TMCO3Q6UWJ1 677 aa19.02■□□□□ 0.64
PCDHA13-202ENST00000409494 OTUD7AQ8TE49 926 aaPredicted RBP19.02■□□□□ 0.64
PCDHA13-202ENST00000409494 USP40Q9NVE5 1235 aa19.02■□□□□ 0.64
PCDHA13-202ENST00000409494 PIGBQ92521 554 aa19.02■□□□□ 0.64
PCDHA13-202ENST00000409494 EAF2Q96CJ1 260 aaPredicted RBP19.02■□□□□ 0.64
PCDHA13-202ENST00000409494 CCDC17Q96LX7 622 aa19.02■□□□□ 0.64
PCDHA13-202ENST00000409494 OSBPL3Q9H4L5 887 aa19.02■□□□□ 0.64
PCDHA13-202ENST00000409494 CGNQ9P2M7 1197 aaKnown RBP19.02■□□□□ 0.64
PCDHA13-202ENST00000409494 SPATA31A6Q5VVP1 1343 aa19.02■□□□□ 0.64
PCDHA13-202ENST00000409494 TMEM87AQ8NBN3 555 aa19.02■□□□□ 0.63
PCDHA13-202ENST00000409494 IMPG2Q9BZV3 1241 aa19.02■□□□□ 0.63
PCDHA13-202ENST00000409494 MADDQ8WXG6 1647 aa19.01■□□□□ 0.63
PCDHA13-202ENST00000409494 TRIM37O94972 964 aa19.01■□□□□ 0.63
PCDHA13-202ENST00000409494 RPL13P26373 211 aaKnown RBP19.01■□□□□ 0.63
PCDHA13-202ENST00000409494 FERMT2Q96AC1 680 aa19.01■□□□□ 0.63
PCDHA13-202ENST00000409494 TRMT1Q9NXH9 659 aaKnown RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms