RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 EXOC5O00471 708 aa13.68□□□□□ -0.22
ITSN1-211ENST00000399355 CSF1RP07333 972 aa13.68□□□□□ -0.22
ITSN1-211ENST00000399355 CDC25AP30304 524 aa13.68□□□□□ -0.22
ITSN1-211ENST00000399355 TMEM67Q5HYA8 995 aa13.68□□□□□ -0.22
ITSN1-211ENST00000399355 MYSM1Q5VVJ2 828 aa13.68□□□□□ -0.22
ITSN1-211ENST00000399355 APOA5Q6Q788 366 aa13.68□□□□□ -0.22
ITSN1-211ENST00000399355 NCOA7Q8NI08 942 aa13.68□□□□□ -0.22
ITSN1-211ENST00000399355 DNAH12Q6ZR08 3092 aa13.67□□□□□ -0.22
ITSN1-211ENST00000399355 HS1BP3Q53T59 392 aa13.67□□□□□ -0.22
ITSN1-211ENST00000399355 FOXP4Q8IVH2 680 aaPredicted RBP13.67□□□□□ -0.22
ITSN1-211ENST00000399355 RCOR1Q9UKL0 485 aa13.67□□□□□ -0.22
ITSN1-211ENST00000399355 TMEM232C9JQI7 657 aa13.67□□□□□ -0.22
ITSN1-211ENST00000399355 PFKFB1P16118 471 aa13.67□□□□□ -0.22
ITSN1-211ENST00000399355 KRT40Q6A162 431 aa13.67□□□□□ -0.22
ITSN1-211ENST00000399355 UIMC1Q96RL1 719 aa13.67□□□□□ -0.22
ITSN1-211ENST00000399355 CPVLQ9H3G5 476 aa13.67□□□□□ -0.22
ITSN1-211ENST00000399355 IFNKQ9P0W0 207 aa13.67□□□□□ -0.22
ITSN1-211ENST00000399355 ELP1O95163 1332 aa13.67□□□□□ -0.22
ITSN1-211ENST00000399355 AKAP11Q9UKA4 1901 aa13.67□□□□□ -0.22
ITSN1-211ENST00000399355 IFIT3O14879 490 aaKnown RBP13.67□□□□□ -0.22
ITSN1-211ENST00000399355 SMYD4Q8IYR2 804 aaPredicted RBP13.67□□□□□ -0.22
ITSN1-211ENST00000399355 FMR1NBQ8N0W7 255 aaPredicted RBP13.67□□□□□ -0.22
ITSN1-211ENST00000399355 SPATA5Q8NB90 893 aa13.67□□□□□ -0.22
ITSN1-211ENST00000399355 SLURP2P0DP57 97 aa13.66□□□□□ -0.22
ITSN1-211ENST00000399355 TDO2P48775 406 aa13.66□□□□□ -0.22
ITSN1-211ENST00000399355 TXNRD3Q86VQ6 643 aa13.66□□□□□ -0.22
ITSN1-211ENST00000399355 MARCH10Q8NA82 808 aaPredicted RBP13.66□□□□□ -0.22
ITSN1-211ENST00000399355 LRP2BPQ9P2M1 347 aa13.66□□□□□ -0.22
ITSN1-211ENST00000399355 CFAP45Q9UL16 551 aa13.66□□□□□ -0.22
ITSN1-211ENST00000399355 KIF23Q02241 960 aaPredicted RBP13.66□□□□□ -0.22
ITSN1-211ENST00000399355 CHAF1AQ13111 956 aaPredicted RBP13.66□□□□□ -0.22
ITSN1-211ENST00000399355 FAM98CQ17RN3 349 aaKnown RBP13.66□□□□□ -0.22
ITSN1-211ENST00000399355 NAPBQ9H115 298 aa13.66□□□□□ -0.22
ITSN1-211ENST00000399355 SLC4A4Q9Y6R1 1079 aa13.66□□□□□ -0.22
ITSN1-211ENST00000399355 CPDO75976 1380 aa13.66□□□□□ -0.22
ITSN1-211ENST00000399355 SPTLC2O15270 562 aa13.66□□□□□ -0.22
ITSN1-211ENST00000399355 ZNF202O95125 648 aa13.66□□□□□ -0.22
ITSN1-211ENST00000399355 TPM2P07951 284 aa13.66□□□□□ -0.22
ITSN1-211ENST00000399355 CSPP1Q1MSJ5 1256 aa13.66□□□□□ -0.22
ITSN1-211ENST00000399355 SHC4Q6S5L8 630 aa13.66□□□□□ -0.22
ITSN1-211ENST00000399355 STRBPQ96SI9 672 aaKnown RBP13.66□□□□□ -0.22
ITSN1-211ENST00000399355 XPO4Q9C0E2 1151 aaKnown RBP13.66□□□□□ -0.22
ITSN1-211ENST00000399355 EPC1Q9H2F5 836 aa13.66□□□□□ -0.22
ITSN1-211ENST00000399355 DDX19AQ9NUU7 478 aaKnown RBP13.66□□□□□ -0.22
ITSN1-211ENST00000399355 CYP2D6P10635 497 aa13.65□□□□□ -0.22
ITSN1-211ENST00000399355 NKX1-1Q15270 411 aaPredicted RBP13.65□□□□□ -0.22
ITSN1-211ENST00000399355 INTS5Q6P9B9 1019 aaKnown RBP13.65□□□□□ -0.22
ITSN1-211ENST00000399355 NBPF11Q86T75 865 aa13.65□□□□□ -0.22
ITSN1-211ENST00000399355 CREBRFQ8IUR6 639 aa13.65□□□□□ -0.22
ITSN1-211ENST00000399355 PRR29P0C7W0 189 aa13.65□□□□□ -0.22
ITSN1-211ENST00000399355 PDE4BQ07343 736 aa13.65□□□□□ -0.22
ITSN1-211ENST00000399355 TPD52L1Q16890 204 aaPredicted RBP13.65□□□□□ -0.22
ITSN1-211ENST00000399355 LONRF3Q496Y0 759 aa13.65□□□□□ -0.22
ITSN1-211ENST00000399355 FAM47AQ5JRC9 791 aa13.65□□□□□ -0.22
ITSN1-211ENST00000399355 PLA2G4DQ86XP0 818 aa13.65□□□□□ -0.22
ITSN1-211ENST00000399355 IFNL3Q8IZI9 196 aa13.65□□□□□ -0.22
ITSN1-211ENST00000399355 CELF1Q92879 486 aaKnown RBP13.65□□□□□ -0.22
ITSN1-211ENST00000399355 LAMA3Q16787 3333 aa13.65□□□□□ -0.22
ITSN1-211ENST00000399355 ERFEQ4G0M1 354 aa13.65□□□□□ -0.22
ITSN1-211ENST00000399355 AGXT2Q9BYV1 514 aa13.65□□□□□ -0.22
ITSN1-211ENST00000399355 NUP188Q5SRE5 1749 aa13.65□□□□□ -0.23
ITSN1-211ENST00000399355 GSG1L2A8MUP6 293 aa13.64□□□□□ -0.23
ITSN1-211ENST00000399355 FAM160A1Q05DH4 1040 aa13.64□□□□□ -0.23
ITSN1-211ENST00000399355 TRDNQ13061 729 aa13.64□□□□□ -0.23
ITSN1-211ENST00000399355 ZNF384Q8TF68 577 aa13.64□□□□□ -0.23
ITSN1-211ENST00000399355 MRPS27Q92552 414 aaKnown RBP13.64□□□□□ -0.23
ITSN1-211ENST00000399355 VPS54Q9P1Q0 977 aa13.64□□□□□ -0.23
ITSN1-211ENST00000399355 ANGEL1Q9UNK9 670 aaKnown RBP13.64□□□□□ -0.23
ITSN1-211ENST00000399355 A0A0U1RQJ8 604 aa13.64□□□□□ -0.23
ITSN1-211ENST00000399355 TCRBV5S4A2TA0A5A2 114 aa13.64□□□□□ -0.23
ITSN1-211ENST00000399355 GOLGA8AA7E2F4 631 aa13.64□□□□□ -0.23
ITSN1-211ENST00000399355 UVSSAQ2YD98 709 aa13.64□□□□□ -0.23
ITSN1-211ENST00000399355 TMC6Q7Z403 805 aa13.64□□□□□ -0.23
ITSN1-211ENST00000399355 UBE2Q2Q8WVN8 375 aa13.64□□□□□ -0.23
ITSN1-211ENST00000399355 ATRIPQ8WXE1 791 aa13.64□□□□□ -0.23
ITSN1-211ENST00000399355 RAI14Q9P0K7 980 aa13.64□□□□□ -0.23
ITSN1-211ENST00000399355 CCDC69A6NI79 296 aa13.64□□□□□ -0.23
ITSN1-211ENST00000399355 RRP9O43818 475 aaKnown RBP13.64□□□□□ -0.23
ITSN1-211ENST00000399355 TNNT1P13805 278 aa13.64□□□□□ -0.23
ITSN1-211ENST00000399355 BMP6P22004 513 aa13.64□□□□□ -0.23
ITSN1-211ENST00000399355 AXDND1Q5T1B0 1012 aaPredicted RBP13.64□□□□□ -0.23
ITSN1-211ENST00000399355 SYNE3Q6ZMZ3 975 aa13.64□□□□□ -0.23
ITSN1-211ENST00000399355 LY9Q9HBG7 655 aa13.64□□□□□ -0.23
ITSN1-211ENST00000399355 PCDHB6Q9Y5E3 794 aa13.64□□□□□ -0.23
ITSN1-211ENST00000399355 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.64□□□□□ -0.23
ITSN1-211ENST00000399355 MYH14Q7Z406 1995 aaKnown RBP13.63□□□□□ -0.23
ITSN1-211ENST00000399355 CIAO1O76071 339 aa13.63□□□□□ -0.23
ITSN1-211ENST00000399355 SKILP12757 684 aa13.63□□□□□ -0.23
ITSN1-211ENST00000399355 CHRNDQ07001 517 aa13.63□□□□□ -0.23
ITSN1-211ENST00000399355 IGDCC4Q8TDY8 1250 aa13.63□□□□□ -0.23
ITSN1-211ENST00000399355 AKAP2Q9Y2D5 859 aa13.63□□□□□ -0.23
ITSN1-211ENST00000399355 SHANK3Q9BYB0 1731 aa13.63□□□□□ -0.23
ITSN1-211ENST00000399355 TFRCP02786 760 aaKnown RBP13.63□□□□□ -0.23
ITSN1-211ENST00000399355 PPP4R3BQ5MIZ7 849 aa13.63□□□□□ -0.23
ITSN1-211ENST00000399355 BAZ2AQ9UIF9 1905 aaKnown RBP13.63□□□□□ -0.23
ITSN1-211ENST00000399355 PKD1L3Q7Z443 1732 aa13.63□□□□□ -0.23
ITSN1-211ENST00000399355 LETM1O95202 739 aaPredicted RBP13.63□□□□□ -0.23
ITSN1-211ENST00000399355 ANO1Q5XXA6 986 aa13.63□□□□□ -0.23
ITSN1-211ENST00000399355 ZSCAN16Q9H4T2 348 aaPredicted RBP13.63□□□□□ -0.23
ITSN1-211ENST00000399355 ZHX1Q9UKY1 873 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms