RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 HDLBPQ00341 1268 aaKnown RBP31.14■■■□□ 2.58
U2AF1-203ENST00000398137 REM2Q8IYK8 340 aaPredicted RBP31.14■■■□□ 2.58
U2AF1-203ENST00000398137 SMC5Q8IY18 1101 aa31.13■■■□□ 2.57
U2AF1-203ENST00000398137 CLMNQ96JQ2 1002 aa31.13■■■□□ 2.57
U2AF1-203ENST00000398137 IFIT2P09913 472 aaKnown RBP31.12■■■□□ 2.57
U2AF1-203ENST00000398137 TM4SF4P48230 202 aa31.12■■■□□ 2.57
U2AF1-203ENST00000398137 GNL3LQ9NVN8 582 aaKnown RBP31.12■■■□□ 2.57
U2AF1-203ENST00000398137 USP2O75604 605 aaPredicted RBP31.11■■■□□ 2.57
U2AF1-203ENST00000398137 ANKRD45Q5TZF3 282 aa31.11■■■□□ 2.57
U2AF1-203ENST00000398137 SPRYD7Q5W111 196 aa31.11■■■□□ 2.57
U2AF1-203ENST00000398137 MRIQ9BWK5 157 aa31.11■■■□□ 2.57
U2AF1-203ENST00000398137 TCP10L2B9ZVM9 353 aa31.1■■■□□ 2.57
U2AF1-203ENST00000398137 SUPT20HL1Q3ZLR7 823 aa31.1■■■□□ 2.57
U2AF1-203ENST00000398137 APOBEC3HQ6NTF7 200 aaKnown RBP31.1■■■□□ 2.57
U2AF1-203ENST00000398137 TEKT1Q969V4 418 aa31.1■■■□□ 2.57
U2AF1-203ENST00000398137 ZDHHC15Q96MV8 337 aa31.1■■■□□ 2.57
U2AF1-203ENST00000398137 MCOLN1Q9GZU1 580 aa31.1■■■□□ 2.57
U2AF1-203ENST00000398137 SUGT1Q9Y2Z0 365 aa31.1■■■□□ 2.57
U2AF1-203ENST00000398137 TTC39AQ5SRH9 613 aa31.09■■■□□ 2.57
U2AF1-203ENST00000398137 B4GALNT3Q6L9W6 998 aa31.09■■■□□ 2.57
U2AF1-203ENST00000398137 TMEM39BQ9GZU3 492 aa31.09■■■□□ 2.57
U2AF1-203ENST00000398137 ZBTB47Q9UFB7 747 aaPredicted RBP31.09■■■□□ 2.57
U2AF1-203ENST00000398137 PPP1R12BO60237 982 aaPredicted RBP31.08■■■□□ 2.57
U2AF1-203ENST00000398137 CACNB3P54284 484 aa31.08■■■□□ 2.57
U2AF1-203ENST00000398137 TNFAIP1Q13829 316 aa31.08■■■□□ 2.57
U2AF1-203ENST00000398137 RASGRF1Q13972 1273 aa31.08■■■□□ 2.57
U2AF1-203ENST00000398137 CCDC158Q5M9N0 1113 aa31.08■■■□□ 2.57
U2AF1-203ENST00000398137 SEMA3EO15041 775 aa31.06■■■□□ 2.56
U2AF1-203ENST00000398137 ARID4AP29374 1257 aaPredicted RBP31.06■■■□□ 2.56
U2AF1-203ENST00000398137 GJA5P36382 358 aa31.06■■■□□ 2.56
U2AF1-203ENST00000398137 WDR66Q8TBY9 1149 aa31.06■■■□□ 2.56
U2AF1-203ENST00000398137 UQCRFS1P1P0C7P4 283 aa31.05■■■□□ 2.56
U2AF1-203ENST00000398137 PRDX5P30044 214 aa31.05■■■□□ 2.56
U2AF1-203ENST00000398137 DGKZQ13574 1117 aa31.05■■■□□ 2.56
U2AF1-203ENST00000398137 HHIPL2Q6UWX4 724 aa31.05■■■□□ 2.56
U2AF1-203ENST00000398137 SLC10A4Q96EP9 437 aa31.05■■■□□ 2.56
U2AF1-203ENST00000398137 WNK4Q96J92 1243 aa31.05■■■□□ 2.56
U2AF1-203ENST00000398137 DENND2AQ9ULE3 1009 aa31.05■■■□□ 2.56
U2AF1-203ENST00000398137 ZBTB22O15209 634 aa31.04■■■□□ 2.56
U2AF1-203ENST00000398137 TBC1D8O95759 1140 aa31.04■■■□□ 2.56
U2AF1-203ENST00000398137 PI16Q6UXB8 463 aa31.04■■■□□ 2.56
U2AF1-203ENST00000398137 MAST3O60307 1309 aa31.03■■■□□ 2.56
U2AF1-203ENST00000398137 UNCXA6NJT0 531 aa31.03■■■□□ 2.56
U2AF1-203ENST00000398137 MCAMP43121 646 aa31.03■■■□□ 2.56
U2AF1-203ENST00000398137 LNPKQ9C0E8 428 aa31.03■■■□□ 2.56
U2AF1-203ENST00000398137 R3HDMLQ9H3Y0 253 aa31.03■■■□□ 2.56
U2AF1-203ENST00000398137 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.03■■■□□ 2.56
U2AF1-203ENST00000398137 NUCB1Q02818 461 aa31.02■■■□□ 2.56
U2AF1-203ENST00000398137 DIXDC1Q155Q3 683 aa31.02■■■□□ 2.56
U2AF1-203ENST00000398137 OTUD7AQ8TE49 926 aaPredicted RBP31.02■■■□□ 2.56
U2AF1-203ENST00000398137 CCDC136Q96JN2 1154 aa31.02■■■□□ 2.56
U2AF1-203ENST00000398137 HMG20BQ9P0W2 317 aa31.02■■■□□ 2.56
U2AF1-203ENST00000398137 SALL1Q9NSC2 1324 aa31.01■■■□□ 2.56
U2AF1-203ENST00000398137 ZBTB48P10074 688 aaPredicted RBP31.01■■■□□ 2.55
U2AF1-203ENST00000398137 IREB2P48200 963 aaKnown RBP31.01■■■□□ 2.55
U2AF1-203ENST00000398137 ERICH6BQ5W0A0 696 aa31.01■■■□□ 2.55
U2AF1-203ENST00000398137 PPP1R3FQ6ZSY5 799 aaPredicted RBP31.01■■■□□ 2.55
U2AF1-203ENST00000398137 ZNF512BQ96KM6 892 aaPredicted RBP31.01■■■□□ 2.55
U2AF1-203ENST00000398137 SNRKQ9NRH2 765 aa31.01■■■□□ 2.55
U2AF1-203ENST00000398137 DAGLAQ9Y4D2 1042 aa31.01■■■□□ 2.55
U2AF1-203ENST00000398137 TNNI2P48788 182 aa31■■■□□ 2.55
U2AF1-203ENST00000398137 SREBF2Q12772 1141 aa31■■■□□ 2.55
U2AF1-203ENST00000398137 CHD1LQ86WJ1 897 aa31■■■□□ 2.55
U2AF1-203ENST00000398137 ANKRD13AQ8IZ07 590 aa31■■■□□ 2.55
U2AF1-203ENST00000398137 SPATA5Q8NB90 893 aa31■■■□□ 2.55
U2AF1-203ENST00000398137 PDS5AQ29RF7 1337 aaKnown RBP30.99■■■□□ 2.55
U2AF1-203ENST00000398137 FKBP1CQ5VVH2 108 aa30.99■■■□□ 2.55
U2AF1-203ENST00000398137 CFHR5Q9BXR6 569 aa30.99■■■□□ 2.55
U2AF1-203ENST00000398137 TSHZ3Q63HK5 1081 aa30.98■■■□□ 2.55
U2AF1-203ENST00000398137 FAM83AQ86UY5 434 aa30.98■■■□□ 2.55
U2AF1-203ENST00000398137 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.98■■■□□ 2.55
U2AF1-203ENST00000398137 MANSC4A6NHS7 340 aaPredicted RBP30.97■■■□□ 2.55
U2AF1-203ENST00000398137 IGF2BP3O00425 579 aaKnown RBP eCLIP30.97■■■□□ 2.55
U2AF1-203ENST00000398137 ZNF296Q8WUU4 475 aaPredicted RBP30.97■■■□□ 2.55
U2AF1-203ENST00000398137 GPATCH3Q96I76 525 aa30.97■■■□□ 2.55
U2AF1-203ENST00000398137 MYH2Q9UKX2 1941 aa30.96■■■□□ 2.55
U2AF1-203ENST00000398137 CCDC85CA6NKD9 419 aa30.96■■■□□ 2.55
U2AF1-203ENST00000398137 CDC42EP5Q6NZY7 148 aa30.96■■■□□ 2.55
U2AF1-203ENST00000398137 IFNL1Q8IU54 200 aa30.96■■■□□ 2.55
U2AF1-203ENST00000398137 CNKSR2Q8WXI2 1034 aa30.96■■■□□ 2.55
U2AF1-203ENST00000398137 ELP3Q9H9T3 547 aa30.96■■■□□ 2.55
U2AF1-203ENST00000398137 ECHDC1Q9NTX5 307 aa30.96■■■□□ 2.55
U2AF1-203ENST00000398137 LDHBP07195 334 aaKnown RBP30.95■■■□□ 2.55
U2AF1-203ENST00000398137 ZAP70P43403 619 aa30.95■■■□□ 2.55
U2AF1-203ENST00000398137 VGLL4Q14135 290 aa30.95■■■□□ 2.55
U2AF1-203ENST00000398137 CENPQQ7L2Z9 268 aaPredicted RBP30.95■■■□□ 2.55
U2AF1-203ENST00000398137 PPP4R2Q9NY27 417 aa30.95■■■□□ 2.55
U2AF1-203ENST00000398137 NDUFB9Q9Y6M9 179 aa30.95■■■□□ 2.55
U2AF1-203ENST00000398137 RPAP1Q9BWH6 1393 aaPredicted RBP30.94■■■□□ 2.54
U2AF1-203ENST00000398137 GPR25O00155 361 aa30.94■■■□□ 2.54
U2AF1-203ENST00000398137 ATP5JP18859 108 aa30.94■■■□□ 2.54
U2AF1-203ENST00000398137 MX1P20591 662 aa30.94■■■□□ 2.54
U2AF1-203ENST00000398137 NOM1Q5C9Z4 860 aaKnown RBP30.94■■■□□ 2.54
U2AF1-203ENST00000398137 OPTNQ96CV9 577 aa30.94■■■□□ 2.54
U2AF1-203ENST00000398137 SALL3Q9BXA9 1300 aa30.94■■■□□ 2.54
U2AF1-203ENST00000398137 NFIAQ12857 509 aa30.93■■■□□ 2.54
U2AF1-203ENST00000398137 PTPN18Q99952 460 aa30.93■■■□□ 2.54
U2AF1-203ENST00000398137 TMOD2Q9NZR1 351 aa30.93■■■□□ 2.54
U2AF1-203ENST00000398137 TESPA1A2RU30 521 aaPredicted RBP30.92■■■□□ 2.54
U2AF1-203ENST00000398137 INHBEP58166 350 aa30.92■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms