RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 IFNKQ9P0W0 207 aa12.08□□□□□ -0.48
CPSF1P1-201ENST00000397477 CPDO75976 1380 aa12.08□□□□□ -0.48
CPSF1P1-201ENST00000397477 PALLDQ8WX93 1383 aa12.08□□□□□ -0.48
CPSF1P1-201ENST00000397477 BTBD18B2RXH4 712 aa12.08□□□□□ -0.48
CPSF1P1-201ENST00000397477 PES1O00541 588 aaKnown RBP12.08□□□□□ -0.48
CPSF1P1-201ENST00000397477 TPM3P06753 285 aa12.08□□□□□ -0.48
CPSF1P1-201ENST00000397477 SKILP12757 684 aa12.08□□□□□ -0.48
CPSF1P1-201ENST00000397477 APOA5Q6Q788 366 aa12.08□□□□□ -0.48
CPSF1P1-201ENST00000397477 MB21D2Q8IYB1 491 aaPredicted RBP12.08□□□□□ -0.48
CPSF1P1-201ENST00000397477 JMYQ8N9B5 988 aa12.08□□□□□ -0.48
CPSF1P1-201ENST00000397477 FUCA2Q9BTY2 467 aa12.08□□□□□ -0.48
CPSF1P1-201ENST00000397477 CSF1RP07333 972 aa12.07□□□□□ -0.48
CPSF1P1-201ENST00000397477 DPCR1Q3MIW9 517 aa12.07□□□□□ -0.48
CPSF1P1-201ENST00000397477 OLFM4Q6UX06 510 aa12.07□□□□□ -0.48
CPSF1P1-201ENST00000397477 RAD21O60216 631 aa12.07□□□□□ -0.48
CPSF1P1-201ENST00000397477 NKX2-3Q8TAU0 364 aa12.07□□□□□ -0.48
CPSF1P1-201ENST00000397477 KCNF1Q9H3M0 494 aa12.07□□□□□ -0.48
CPSF1P1-201ENST00000397477 IL6STP40189 918 aaPredicted RBP12.07□□□□□ -0.48
CPSF1P1-201ENST00000397477 DYNLL1P63167 89 aaKnown RBP12.07□□□□□ -0.48
CPSF1P1-201ENST00000397477 STRBPQ96SI9 672 aaKnown RBP12.07□□□□□ -0.48
CPSF1P1-201ENST00000397477 CDC5LQ99459 802 aaKnown RBP12.07□□□□□ -0.48
CPSF1P1-201ENST00000397477 ZNF652Q9Y2D9 606 aa12.07□□□□□ -0.48
CPSF1P1-201ENST00000397477 SMIM22K7EJ46 135 aa12.06□□□□□ -0.48
CPSF1P1-201ENST00000397477 PFKFB1P16118 471 aa12.06□□□□□ -0.48
CPSF1P1-201ENST00000397477 NBPF5PQ86XG9 351 aaPredicted RBP12.06□□□□□ -0.48
CPSF1P1-201ENST00000397477 LINC00301Q8NCQ3 95 aa12.06□□□□□ -0.48
CPSF1P1-201ENST00000397477 CACTINQ8WUQ7 758 aaKnown RBP12.06□□□□□ -0.48
CPSF1P1-201ENST00000397477 COL5A2P05997 1499 aaPredicted RBP12.06□□□□□ -0.48
CPSF1P1-201ENST00000397477 MAGEB6P1A0A0J9YX57 407 aa12.06□□□□□ -0.48
CPSF1P1-201ENST00000397477 PATL2C9JE40 543 aaKnown RBP12.06□□□□□ -0.48
CPSF1P1-201ENST00000397477 AFMP43652 599 aa12.06□□□□□ -0.48
CPSF1P1-201ENST00000397477 PNOCQ13519 176 aa12.06□□□□□ -0.48
CPSF1P1-201ENST00000397477 ALDH8A1Q9H2A2 487 aaPredicted RBP12.06□□□□□ -0.48
CPSF1P1-201ENST00000397477 CABP5Q9NP86 173 aa12.06□□□□□ -0.48
CPSF1P1-201ENST00000397477 ANKIB1Q9P2G1 1089 aa12.06□□□□□ -0.48
CPSF1P1-201ENST00000397477 TRIM28Q13263 835 aaKnown RBP12.06□□□□□ -0.48
CPSF1P1-201ENST00000397477 CCDC144BQ3MJ40 725 aa12.06□□□□□ -0.48
CPSF1P1-201ENST00000397477 ERFEQ4G0M1 354 aa12.06□□□□□ -0.48
CPSF1P1-201ENST00000397477 DIS3L2Q8IYB7 885 aaKnown RBP12.06□□□□□ -0.48
CPSF1P1-201ENST00000397477 SPDYE4A6NLX3 237 aa12.05□□□□□ -0.48
CPSF1P1-201ENST00000397477 RIOK3O14730 519 aaKnown RBP12.05□□□□□ -0.48
CPSF1P1-201ENST00000397477 ZPR1O75312 459 aa12.05□□□□□ -0.48
CPSF1P1-201ENST00000397477 KIF23Q02241 960 aaPredicted RBP12.05□□□□□ -0.48
CPSF1P1-201ENST00000397477 ZNF827Q17R98 1081 aa12.05□□□□□ -0.48
CPSF1P1-201ENST00000397477 AKNAD1Q5T1N1 836 aa12.05□□□□□ -0.48
CPSF1P1-201ENST00000397477 HPS5Q9UPZ3 1129 aa12.05□□□□□ -0.48
CPSF1P1-201ENST00000397477 LMTK3Q96Q04 1460 aa12.05□□□□□ -0.48
CPSF1P1-201ENST00000397477 NR5A1Q13285 461 aa12.05□□□□□ -0.48
CPSF1P1-201ENST00000397477 FAM47AQ5JRC9 791 aa12.05□□□□□ -0.48
CPSF1P1-201ENST00000397477 ADALQ6DHV7 355 aa12.05□□□□□ -0.48
CPSF1P1-201ENST00000397477 STAMQ92783 540 aa12.05□□□□□ -0.48
CPSF1P1-201ENST00000397477 AATFQ9NY61 560 aaKnown RBP eCLIP12.05□□□□□ -0.48
CPSF1P1-201ENST00000397477 MROH5Q6ZUA9 1318 aa12.05□□□□□ -0.48
CPSF1P1-201ENST00000397477 GUCY1A2P33402 732 aa12.04□□□□□ -0.48
CPSF1P1-201ENST00000397477 UBE3CQ15386 1083 aa12.04□□□□□ -0.48
CPSF1P1-201ENST00000397477 CCDC112Q8NEF3 446 aa12.04□□□□□ -0.48
CPSF1P1-201ENST00000397477 VPS54Q9P1Q0 977 aa12.04□□□□□ -0.48
CPSF1P1-201ENST00000397477 SRP68Q9UHB9 627 aaKnown RBP12.04□□□□□ -0.48
CPSF1P1-201ENST00000397477 SH2B2O14492 632 aaPredicted RBP12.04□□□□□ -0.48
CPSF1P1-201ENST00000397477 CBX1P83916 185 aa12.04□□□□□ -0.48
CPSF1P1-201ENST00000397477 GOLGA8FQ08AF8 430 aa12.04□□□□□ -0.48
CPSF1P1-201ENST00000397477 GOLGA8DPQ0D2H9 430 aa12.04□□□□□ -0.48
CPSF1P1-201ENST00000397477 ITPK1Q13572 414 aa12.04□□□□□ -0.48
CPSF1P1-201ENST00000397477 TULP1O00294 542 aaPredicted RBP12.04□□□□□ -0.48
CPSF1P1-201ENST00000397477 GNPATO15228 680 aa12.04□□□□□ -0.48
CPSF1P1-201ENST00000397477 BRAPQ7Z569 592 aa12.04□□□□□ -0.48
CPSF1P1-201ENST00000397477 ILDR1Q86SU0 546 aaPredicted RBP12.04□□□□□ -0.48
CPSF1P1-201ENST00000397477 CCAR2Q8N163 923 aaKnown RBP12.04□□□□□ -0.48
CPSF1P1-201ENST00000397477 KIAA1524Q8TCG1 905 aa12.04□□□□□ -0.48
CPSF1P1-201ENST00000397477 KRT23Q9C075 422 aa12.04□□□□□ -0.48
CPSF1P1-201ENST00000397477 KIAA1468Q9P260 1216 aa12.04□□□□□ -0.48
CPSF1P1-201ENST00000397477 KDM3BQ7LBC6 1761 aa12.04□□□□□ -0.48
CPSF1P1-201ENST00000397477 GRAMD1CQ8IYS0 662 aa12.03□□□□□ -0.48
CPSF1P1-201ENST00000397477 ZBTB9Q96C00 473 aa12.03□□□□□ -0.48
CPSF1P1-201ENST00000397477 RTEL1Q9NZ71 1219 aa12.03□□□□□ -0.48
CPSF1P1-201ENST00000397477 V9GY48 417 aaPredicted RBP12.03□□□□□ -0.48
CPSF1P1-201ENST00000397477 FOXP2O15409 715 aa12.03□□□□□ -0.48
CPSF1P1-201ENST00000397477 SFPQP23246 707 aaKnown RBP eCLIP12.03□□□□□ -0.48
CPSF1P1-201ENST00000397477 STX17P56962 302 aa12.03□□□□□ -0.48
CPSF1P1-201ENST00000397477 PTPN14Q15678 1187 aa12.03□□□□□ -0.48
CPSF1P1-201ENST00000397477 IFIT1BQ5T764 474 aaKnown RBP12.03□□□□□ -0.48
CPSF1P1-201ENST00000397477 CPLX3Q8WVH0 158 aa12.03□□□□□ -0.48
CPSF1P1-201ENST00000397477 EPB41L4AQ9HCS5 686 aaPredicted RBP12.03□□□□□ -0.48
CPSF1P1-201ENST00000397477 MARF1Q9Y4F3 1742 aaKnown RBP12.03□□□□□ -0.48
CPSF1P1-201ENST00000397477 ZMYM6O95789 1325 aa12.03□□□□□ -0.48
CPSF1P1-201ENST00000397477 XBP1P17861 261 aa12.03□□□□□ -0.48
CPSF1P1-201ENST00000397477 DZIP1Q86YF9 867 aaKnown RBP12.03□□□□□ -0.48
CPSF1P1-201ENST00000397477 TDRD7Q8NHU6 1098 aaKnown RBP12.03□□□□□ -0.48
CPSF1P1-201ENST00000397477 SETDB2Q96T68 719 aa12.03□□□□□ -0.48
CPSF1P1-201ENST00000397477 XPO4Q9C0E2 1151 aaKnown RBP12.03□□□□□ -0.48
CPSF1P1-201ENST00000397477 FBXO3Q9UK99 471 aa12.03□□□□□ -0.48
CPSF1P1-201ENST00000397477 LMO7Q8WWI1 1683 aa12.03□□□□□ -0.48
CPSF1P1-201ENST00000397477 DYNC1I1O14576 645 aa12.02□□□□□ -0.48
CPSF1P1-201ENST00000397477 COBLO75128 1261 aa12.02□□□□□ -0.48
CPSF1P1-201ENST00000397477 WDHD1O75717 1129 aaPredicted RBP12.02□□□□□ -0.48
CPSF1P1-201ENST00000397477 IQCA1Q86XH1 822 aa12.02□□□□□ -0.48
CPSF1P1-201ENST00000397477 TRMT44Q8IYL2 757 aaKnown RBP12.02□□□□□ -0.48
CPSF1P1-201ENST00000397477 MARCH10Q8NA82 808 aaPredicted RBP12.02□□□□□ -0.48
CPSF1P1-201ENST00000397477 ESR2Q92731 530 aa12.02□□□□□ -0.48
CPSF1P1-201ENST00000397477 DHX58Q96C10 678 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms