RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 DDX3YO15523 660 aaKnown RBP6.69□□□□□ -1.34
GABPB1-204ENST00000396464 MAFGO15525 162 aa6.69□□□□□ -1.34
GABPB1-204ENST00000396464 CREB3O43889 395 aa6.69□□□□□ -1.34
GABPB1-204ENST00000396464 GAS2O43903 313 aaKnown RBP6.69□□□□□ -1.34
GABPB1-204ENST00000396464 NLRP12P59046 1061 aa6.69□□□□□ -1.34
GABPB1-204ENST00000396464 FKBP4Q02790 459 aaKnown RBP eCLIP6.69□□□□□ -1.34
GABPB1-204ENST00000396464 DNM1Q05193 864 aaKnown RBP6.69□□□□□ -1.34
GABPB1-204ENST00000396464 CLEC10AQ8IUN9 316 aa6.69□□□□□ -1.34
GABPB1-204ENST00000396464 EDEM1Q92611 657 aa6.69□□□□□ -1.34
GABPB1-204ENST00000396464 EVI5LQ96CN4 794 aa6.69□□□□□ -1.34
GABPB1-204ENST00000396464 FAM46AQ96IP4 442 aaKnown RBP6.69□□□□□ -1.34
GABPB1-204ENST00000396464 ADAM19Q9H013 955 aa6.69□□□□□ -1.34
GABPB1-204ENST00000396464 RNF208Q9H0X6 261 aa6.69□□□□□ -1.34
GABPB1-204ENST00000396464 RNF19AQ9NV58 838 aa6.69□□□□□ -1.34
GABPB1-204ENST00000396464 SEPT3Q9UH03 358 aa6.69□□□□□ -1.34
GABPB1-204ENST00000396464 SORBS3O60504 671 aa6.68□□□□□ -1.34
GABPB1-204ENST00000396464 BMP3P12645 472 aa6.68□□□□□ -1.34
GABPB1-204ENST00000396464 TXKP42681 527 aa6.68□□□□□ -1.34
GABPB1-204ENST00000396464 PDE3BQ13370 1112 aa6.68□□□□□ -1.34
GABPB1-204ENST00000396464 SF3B2Q13435 895 aaKnown RBP6.68□□□□□ -1.34
GABPB1-204ENST00000396464 AAMPQ13685 434 aa6.68□□□□□ -1.34
GABPB1-204ENST00000396464 TMC4Q7Z404 712 aa6.68□□□□□ -1.34
GABPB1-204ENST00000396464 ATCAYQ86WG3 371 aa6.68□□□□□ -1.34
GABPB1-204ENST00000396464 FAM20CQ8IXL6 584 aa6.68□□□□□ -1.34
GABPB1-204ENST00000396464 CCDC146Q8IYE0 955 aa6.68□□□□□ -1.34
GABPB1-204ENST00000396464 GIMAP7Q8NHV1 300 aa6.68□□□□□ -1.34
GABPB1-204ENST00000396464 PMEPA1Q969W9 287 aa6.68□□□□□ -1.34
GABPB1-204ENST00000396464 SGSM3Q96HU1 749 aa6.68□□□□□ -1.34
GABPB1-204ENST00000396464 RUSC1Q9BVN2 902 aa6.68□□□□□ -1.34
GABPB1-204ENST00000396464 OSGEPQ9NPF4 335 aa6.68□□□□□ -1.34
GABPB1-204ENST00000396464 VTI1BQ9UEU0 232 aa6.68□□□□□ -1.34
GABPB1-204ENST00000396464 G3BP2Q9UN86 482 aaKnown RBP6.68□□□□□ -1.34
GABPB1-204ENST00000396464 COL17A1Q9UMD9 1497 aaPredicted RBP6.68□□□□□ -1.34
GABPB1-204ENST00000396464 PDE2AO00408 941 aaPredicted RBP6.67□□□□□ -1.34
GABPB1-204ENST00000396464 PPFIA4O75335 1185 aa6.67□□□□□ -1.34
GABPB1-204ENST00000396464 GP2P55259 537 aaKnown RBP6.67□□□□□ -1.34
GABPB1-204ENST00000396464 SETQ01105 290 aaPredicted RBP6.67□□□□□ -1.34
GABPB1-204ENST00000396464 BEND4Q6ZU67 534 aa6.67□□□□□ -1.34
GABPB1-204ENST00000396464 MCF2L2Q86YR7 1114 aa6.67□□□□□ -1.34
GABPB1-204ENST00000396464 ZDHHC13Q8IUH4 622 aa6.67□□□□□ -1.34
GABPB1-204ENST00000396464 STAG1Q8WVM7 1258 aa6.67□□□□□ -1.34
GABPB1-204ENST00000396464 DUSP9Q99956 384 aaKnown RBP6.67□□□□□ -1.34
GABPB1-204ENST00000396464 RBCK1Q9BYM8 510 aa6.67□□□□□ -1.34
GABPB1-204ENST00000396464 UBA5Q9GZZ9 404 aa6.67□□□□□ -1.34
GABPB1-204ENST00000396464 CNTN3Q9P232 1028 aa6.67□□□□□ -1.34
GABPB1-204ENST00000396464 INPP5FQ9Y2H2 1132 aa6.67□□□□□ -1.34
GABPB1-204ENST00000396464 KIAA1324LA8MWY0 1029 aaPredicted RBP6.67□□□□□ -1.34
GABPB1-204ENST00000396464 TREHO43280 583 aa6.67□□□□□ -1.34
GABPB1-204ENST00000396464 ADAM11O75078 769 aa6.67□□□□□ -1.34
GABPB1-204ENST00000396464 PRPF40AO75400 957 aaKnown RBP6.67□□□□□ -1.34
GABPB1-204ENST00000396464 S100BP04271 92 aaPredicted RBP6.67□□□□□ -1.34
GABPB1-204ENST00000396464 LDHBP07195 334 aaKnown RBP6.67□□□□□ -1.34
GABPB1-204ENST00000396464 FAM50AQ14320 339 aaKnown RBP6.67□□□□□ -1.34
GABPB1-204ENST00000396464 LCE3BQ5TA77 95 aa6.67□□□□□ -1.34
GABPB1-204ENST00000396464 KRTAP1-3Q8IUG1 177 aa6.67□□□□□ -1.34
GABPB1-204ENST00000396464 FAM83CQ9BQN1 747 aa6.67□□□□□ -1.34
GABPB1-204ENST00000396464 GOLGA2P5Q9HBQ8 144 aa6.67□□□□□ -1.34
GABPB1-204ENST00000396464 TERF2IPQ9NYB0 399 aa6.67□□□□□ -1.34
GABPB1-204ENST00000396464 HIF3AQ9Y2N7 669 aa6.67□□□□□ -1.34
GABPB1-204ENST00000396464 ENPP3O14638 875 aa6.66□□□□□ -1.34
GABPB1-204ENST00000396464 STK10O94804 968 aaKnown RBP6.66□□□□□ -1.34
GABPB1-204ENST00000396464 MED26O95402 600 aa6.66□□□□□ -1.34
GABPB1-204ENST00000396464 XRCC5P13010 732 aaKnown RBP6.66□□□□□ -1.34
GABPB1-204ENST00000396464 RXRBP28702 533 aa6.66□□□□□ -1.34
GABPB1-204ENST00000396464 TBX4P57082 545 aa6.66□□□□□ -1.34
GABPB1-204ENST00000396464 DAB2P98082 770 aa6.66□□□□□ -1.34
GABPB1-204ENST00000396464 C19orf57Q0VDD7 668 aa6.66□□□□□ -1.34
GABPB1-204ENST00000396464 NFE2L2Q16236 605 aa6.66□□□□□ -1.34
GABPB1-204ENST00000396464 ADAMTSL4Q6UY14 1074 aa6.66□□□□□ -1.34
GABPB1-204ENST00000396464 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.66□□□□□ -1.34
GABPB1-204ENST00000396464 C1orf127Q8N9H9 656 aa6.66□□□□□ -1.34
GABPB1-204ENST00000396464 HELQQ8TDG4 1101 aa6.66□□□□□ -1.34
GABPB1-204ENST00000396464 MRFAP1L1Q96HT8 127 aa6.66□□□□□ -1.34
GABPB1-204ENST00000396464 DZANK1Q9NVP4 752 aa6.66□□□□□ -1.34
GABPB1-204ENST00000396464 DDX56Q9NY93 547 aaKnown RBP6.66□□□□□ -1.34
GABPB1-204ENST00000396464 SALL4Q9UJQ4 1053 aa6.66□□□□□ -1.34
GABPB1-204ENST00000396464 LAS1LQ9Y4W2 734 aaKnown RBP6.66□□□□□ -1.34
GABPB1-204ENST00000396464 DNAJC6O75061 913 aa6.65□□□□□ -1.35
GABPB1-204ENST00000396464 FGRP09769 529 aa6.65□□□□□ -1.35
GABPB1-204ENST00000396464 ITGAEP38570 1179 aa6.65□□□□□ -1.35
GABPB1-204ENST00000396464 PREPP48147 710 aa6.65□□□□□ -1.35
GABPB1-204ENST00000396464 PSMD2Q13200 908 aa6.65□□□□□ -1.35
GABPB1-204ENST00000396464 NUTM2GQ5VZR2 741 aa6.65□□□□□ -1.35
GABPB1-204ENST00000396464 ALKBH2Q6NS38 261 aa6.65□□□□□ -1.35
GABPB1-204ENST00000396464 XKR5Q6UX68 686 aa6.65□□□□□ -1.35
GABPB1-204ENST00000396464 SHKBP1Q8TBC3 707 aa6.65□□□□□ -1.35
GABPB1-204ENST00000396464 ATG3Q9NT62 314 aa6.65□□□□□ -1.35
GABPB1-204ENST00000396464 OAS3Q9Y6K5 1087 aaKnown RBP6.65□□□□□ -1.35
GABPB1-204ENST00000396464 WNT11O96014 354 aa6.64□□□□□ -1.35
GABPB1-204ENST00000396464 PDGFAP04085 211 aa6.64□□□□□ -1.35
GABPB1-204ENST00000396464 MZF1P28698 734 aaPredicted RBP6.64□□□□□ -1.35
GABPB1-204ENST00000396464 MAPK8P45983 427 aa6.64□□□□□ -1.35
GABPB1-204ENST00000396464 FGD1P98174 961 aa6.64□□□□□ -1.35
GABPB1-204ENST00000396464 IKBKEQ14164 716 aa6.64□□□□□ -1.35
GABPB1-204ENST00000396464 CCAR1Q8IX12 1150 aaKnown RBP6.64□□□□□ -1.35
GABPB1-204ENST00000396464 C12orf50Q8NA57 414 aaPredicted RBP6.64□□□□□ -1.35
GABPB1-204ENST00000396464 USP26Q9BXU7 913 aa6.64□□□□□ -1.35
GABPB1-204ENST00000396464 SPC25Q9HBM1 224 aa6.64□□□□□ -1.35
GABPB1-204ENST00000396464 PRDM10Q9NQV6 1147 aa6.64□□□□□ -1.35
GABPB1-204ENST00000396464 BTBD11A6QL63 1104 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms