RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 NSUN4Q96CB9 384 aaKnown RBP29.16■■■□□ 2.26
CTF1-202ENST00000395019 ARMT1Q9H993 441 aa29.16■■■□□ 2.26
CTF1-202ENST00000395019 FOXD4L1Q9NU39 408 aa29.16■■■□□ 2.26
CTF1-202ENST00000395019 HMGB1P09429 215 aaKnown RBP29.16■■■□□ 2.26
CTF1-202ENST00000395019 NOL8Q76FK4 1167 aaKnown RBP29.16■■■□□ 2.26
CTF1-202ENST00000395019 COL9A3Q14050 684 aaPredicted RBP29.15■■■□□ 2.26
CTF1-202ENST00000395019 ADGRA1Q86SQ6 560 aa29.15■■■□□ 2.26
CTF1-202ENST00000395019 LCORLQ8N3X6 602 aa29.15■■■□□ 2.26
CTF1-202ENST00000395019 ZNF384Q8TF68 577 aa29.15■■■□□ 2.26
CTF1-202ENST00000395019 MXD3Q9BW11 206 aa29.15■■■□□ 2.26
CTF1-202ENST00000395019 E7EWF7 191 aa29.14■■■□□ 2.26
CTF1-202ENST00000395019 PODNQ7Z5L7 613 aa29.14■■■□□ 2.26
CTF1-202ENST00000395019 CWC22Q9HCG8 908 aaKnown RBP29.14■■■□□ 2.26
CTF1-202ENST00000395019 ZNRF3Q9ULT6 936 aa29.14■■■□□ 2.26
CTF1-202ENST00000395019 RAD17O75943 681 aa29.13■■■□□ 2.25
CTF1-202ENST00000395019 APPP05067 770 aa29.13■■■□□ 2.25
CTF1-202ENST00000395019 GTF2IP78347 998 aa29.13■■■□□ 2.25
CTF1-202ENST00000395019 MECOMQ03112 1051 aa29.13■■■□□ 2.25
CTF1-202ENST00000395019 ANKRD1Q15327 319 aa29.13■■■□□ 2.25
CTF1-202ENST00000395019 JDP2Q8WYK2 163 aa29.13■■■□□ 2.25
CTF1-202ENST00000395019 INTS4Q96HW7 963 aaKnown RBP29.13■■■□□ 2.25
CTF1-202ENST00000395019 MAST2Q6P0Q8 1798 aa29.13■■■□□ 2.25
CTF1-202ENST00000395019 MAGEB6P1A0A0J9YX57 407 aa29.12■■■□□ 2.25
CTF1-202ENST00000395019 ZNF213O14771 459 aa29.12■■■□□ 2.25
CTF1-202ENST00000395019 PRDX5P30044 214 aa29.12■■■□□ 2.25
CTF1-202ENST00000395019 MIGA1Q8NAN2 632 aa29.12■■■□□ 2.25
CTF1-202ENST00000395019 FBXW7Q969H0 707 aa29.12■■■□□ 2.25
CTF1-202ENST00000395019 ZSCAN31Q96LW9 406 aaPredicted RBP29.12■■■□□ 2.25
CTF1-202ENST00000395019 ZNF541Q9H0D2 1346 aa29.12■■■□□ 2.25
CTF1-202ENST00000395019 FZD9O00144 591 aa29.12■■■□□ 2.25
CTF1-202ENST00000395019 IFNL3Q8IZI9 196 aa29.12■■■□□ 2.25
CTF1-202ENST00000395019 RIOK1Q9BRS2 568 aaKnown RBP29.12■■■□□ 2.25
CTF1-202ENST00000395019 GSG1L2A8MUP6 293 aa29.11■■■□□ 2.25
CTF1-202ENST00000395019 EPB41L4AQ9HCS5 686 aaPredicted RBP29.11■■■□□ 2.25
CTF1-202ENST00000395019 HAND2P61296 217 aa29.1■■■□□ 2.25
CTF1-202ENST00000395019 CXCL9Q07325 125 aa29.1■■■□□ 2.25
CTF1-202ENST00000395019 GRIK5Q16478 980 aa29.1■■■□□ 2.25
CTF1-202ENST00000395019 DHX32Q7L7V1 743 aaKnown RBP29.1■■■□□ 2.25
CTF1-202ENST00000395019 SLC4A4Q9Y6R1 1079 aa29.1■■■□□ 2.25
CTF1-202ENST00000395019 FAM205AQ6ZU69 1335 aa29.1■■■□□ 2.25
CTF1-202ENST00000395019 CERS5Q8N5B7 392 aa29.09■■■□□ 2.25
CTF1-202ENST00000395019 NACAP1Q9BZK3 213 aa29.09■■■□□ 2.25
CTF1-202ENST00000395019 SH2B1Q9NRF2 756 aaPredicted RBP29.09■■■□□ 2.25
CTF1-202ENST00000395019 ADAMTSL1Q8N6G6 1762 aa29.09■■■□□ 2.25
CTF1-202ENST00000395019 PSMD14O00487 310 aa29.09■■■□□ 2.25
CTF1-202ENST00000395019 LDHBP07195 334 aaKnown RBP29.09■■■□□ 2.25
CTF1-202ENST00000395019 DACT2Q5SW24 774 aa29.09■■■□□ 2.25
CTF1-202ENST00000395019 TCEANC2Q96MN5 208 aa29.09■■■□□ 2.25
CTF1-202ENST00000395019 NAPBQ9H115 298 aa29.09■■■□□ 2.25
CTF1-202ENST00000395019 PRKAB2O43741 272 aa29.08■■■□□ 2.25
CTF1-202ENST00000395019 EXOSC10Q01780 885 aaKnown RBP29.08■■■□□ 2.25
CTF1-202ENST00000395019 TOB2Q14106 344 aaPredicted RBP29.08■■■□□ 2.25
CTF1-202ENST00000395019 DZIP1Q86YF9 867 aaKnown RBP29.08■■■□□ 2.25
CTF1-202ENST00000395019 LAMA4Q16363 1823 aa29.07■■■□□ 2.24
CTF1-202ENST00000395019 USP17L3A6NCW0 530 aa29.07■■■□□ 2.24
CTF1-202ENST00000395019 USP17L4A6NCW7 530 aa29.07■■■□□ 2.24
CTF1-202ENST00000395019 USP17L1Q7RTZ2 530 aa29.07■■■□□ 2.24
CTF1-202ENST00000395019 LARP6Q9BRS8 491 aaKnown RBP29.07■■■□□ 2.24
CTF1-202ENST00000395019 TBC1D22AQ8WUA7 517 aa29.06■■■□□ 2.24
CTF1-202ENST00000395019 STRIP1Q5VSL9 837 aa29.05■■■□□ 2.24
CTF1-202ENST00000395019 NBPF3Q9H094 633 aa29.05■■■□□ 2.24
CTF1-202ENST00000395019 TPCN1Q9ULQ1 816 aa29.05■■■□□ 2.24
CTF1-202ENST00000395019 ZBTB12Q9Y330 459 aaPredicted RBP29.05■■■□□ 2.24
CTF1-202ENST00000395019 DYNLL1P63167 89 aaKnown RBP29.05■■■□□ 2.24
CTF1-202ENST00000395019 GSTO1P78417 241 aa29.05■■■□□ 2.24
CTF1-202ENST00000395019 MFSD14BQ5SR56 506 aa29.05■■■□□ 2.24
CTF1-202ENST00000395019 Q6ZUG5 572 aa29.05■■■□□ 2.24
CTF1-202ENST00000395019 DCAF8L1A6NGE4 600 aa29.04■■■□□ 2.24
CTF1-202ENST00000395019 LARGE1O95461 756 aa29.04■■■□□ 2.24
CTF1-202ENST00000395019 CIAPIN1Q6FI81 312 aa29.04■■■□□ 2.24
CTF1-202ENST00000395019 NCOA7Q8NI08 942 aa29.04■■■□□ 2.24
CTF1-202ENST00000395019 VIL1P09327 827 aaKnown RBP29.03■■■□□ 2.24
CTF1-202ENST00000395019 TDO2P48775 406 aa29.03■■■□□ 2.24
CTF1-202ENST00000395019 ME3Q16798 604 aa29.03■■■□□ 2.24
CTF1-202ENST00000395019 TBC1D10CQ8IV04 446 aa29.03■■■□□ 2.24
CTF1-202ENST00000395019 AGXT2Q9BYV1 514 aa29.03■■■□□ 2.24
CTF1-202ENST00000395019 MYH2Q9UKX2 1941 aa29.02■■■□□ 2.24
CTF1-202ENST00000395019 EIF6P56537 245 aaKnown RBP29.02■■■□□ 2.24
CTF1-202ENST00000395019 RAB3GAP1Q15042 981 aa29.02■■■□□ 2.24
CTF1-202ENST00000395019 GIMAP6Q6P9H5 292 aa29.02■■■□□ 2.24
CTF1-202ENST00000395019 MB21D2Q8IYB1 491 aaPredicted RBP29.02■■■□□ 2.24
CTF1-202ENST00000395019 FBXL16Q8N461 479 aa29.02■■■□□ 2.24
CTF1-202ENST00000395019 LDHCP07864 332 aa29.02■■■□□ 2.24
CTF1-202ENST00000395019 GJA3Q9Y6H8 435 aa29.02■■■□□ 2.24
CTF1-202ENST00000395019 WDR19Q8NEZ3 1342 aa29.01■■■□□ 2.23
CTF1-202ENST00000395019 NUCB2P80303 420 aa29.01■■■□□ 2.23
CTF1-202ENST00000395019 NFKBIBQ15653 356 aa29.01■■■□□ 2.23
CTF1-202ENST00000395019 RSBN1LQ6PCB5 846 aaPredicted RBP29.01■■■□□ 2.23
CTF1-202ENST00000395019 RALYLQ86SE5 291 aaKnown RBP29.01■■■□□ 2.23
CTF1-202ENST00000395019 SDR42E1Q8WUS8 393 aa29.01■■■□□ 2.23
CTF1-202ENST00000395019 ANP32EQ9BTT0 268 aa29.01■■■□□ 2.23
CTF1-202ENST00000395019 AATFQ9NY61 560 aaKnown RBP eCLIP29.01■■■□□ 2.23
CTF1-202ENST00000395019 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.01■■■□□ 2.23
CTF1-202ENST00000395019 F8W031 263 aaPredicted RBP29■■■□□ 2.23
CTF1-202ENST00000395019 TRDNQ13061 729 aa29■■■□□ 2.23
CTF1-202ENST00000395019 CRNKL1Q9BZJ0 848 aaKnown RBP29■■■□□ 2.23
CTF1-202ENST00000395019 MCM5P33992 734 aa28.99■■■□□ 2.23
CTF1-202ENST00000395019 GMLQ99445 158 aa28.99■■■□□ 2.23
CTF1-202ENST00000395019 SUGT1Q9Y2Z0 365 aa28.99■■■□□ 2.23
CTF1-202ENST00000395019 SHTN1A0MZ66 631 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms