RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 UBXN1Q04323 297 aa19.24■□□□□ 0.67
TRAF3IP1-202ENST00000391993 CEP85LQ5SZL2 805 aa19.24■□□□□ 0.67
TRAF3IP1-202ENST00000391993 PNMA8AQ86V59 439 aaPredicted RBP19.24■□□□□ 0.67
TRAF3IP1-202ENST00000391993 CTCFLQ8NI51 663 aaPredicted RBP19.24■□□□□ 0.67
TRAF3IP1-202ENST00000391993 ATP10DQ9P241 1426 aa19.24■□□□□ 0.67
TRAF3IP1-202ENST00000391993 IFT88Q13099 833 aa19.24■□□□□ 0.67
TRAF3IP1-202ENST00000391993 AOX1Q06278 1338 aa19.24■□□□□ 0.67
TRAF3IP1-202ENST00000391993 ADGRL1O94910 1474 aa19.24■□□□□ 0.67
TRAF3IP1-202ENST00000391993 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.24■□□□□ 0.67
TRAF3IP1-202ENST00000391993 A0A087WZG4 1122 aa19.23■□□□□ 0.67
TRAF3IP1-202ENST00000391993 CDKL5O76039 1030 aa19.23■□□□□ 0.67
TRAF3IP1-202ENST00000391993 CASP14P31944 242 aa19.23■□□□□ 0.67
TRAF3IP1-202ENST00000391993 HDGFP51858 240 aaKnown RBP19.23■□□□□ 0.67
TRAF3IP1-202ENST00000391993 PSME1Q06323 249 aa19.23■□□□□ 0.67
TRAF3IP1-202ENST00000391993 KIRREL3Q8IZU9 778 aa19.23■□□□□ 0.67
TRAF3IP1-202ENST00000391993 CEP83Q9Y592 693 aa19.23■□□□□ 0.67
TRAF3IP1-202ENST00000391993 MYO6Q9UM54 1294 aa19.23■□□□□ 0.67
TRAF3IP1-202ENST00000391993 SMIM23A6NLE4 172 aa19.23■□□□□ 0.67
TRAF3IP1-202ENST00000391993 EIF4E1BA6NMX2 242 aaKnown RBP19.23■□□□□ 0.67
TRAF3IP1-202ENST00000391993 TAF5LO75529 589 aa19.23■□□□□ 0.67
TRAF3IP1-202ENST00000391993 SLC20A2Q08357 652 aa19.23■□□□□ 0.67
TRAF3IP1-202ENST00000391993 POTEDQ86YR6 584 aa19.23■□□□□ 0.67
TRAF3IP1-202ENST00000391993 TACO1Q9BSH4 297 aaKnown RBP19.23■□□□□ 0.67
TRAF3IP1-202ENST00000391993 FANCAO15360 1455 aa19.23■□□□□ 0.67
TRAF3IP1-202ENST00000391993 STX10O60499 249 aa19.22■□□□□ 0.67
TRAF3IP1-202ENST00000391993 GCKP35557 465 aa19.22■□□□□ 0.67
TRAF3IP1-202ENST00000391993 ADD1P35611 737 aaKnown RBP19.22■□□□□ 0.67
TRAF3IP1-202ENST00000391993 PDCLQ13371 301 aa19.22■□□□□ 0.67
TRAF3IP1-202ENST00000391993 TDRD12Q587J7 1177 aaKnown RBP19.22■□□□□ 0.67
TRAF3IP1-202ENST00000391993 VSTM4Q8IW00 320 aa19.22■□□□□ 0.67
TRAF3IP1-202ENST00000391993 ODF2LQ9ULJ1 636 aa19.22■□□□□ 0.67
TRAF3IP1-202ENST00000391993 KIF24Q5T7B8 1368 aa19.22■□□□□ 0.67
TRAF3IP1-202ENST00000391993 CUTAO60888 179 aa19.22■□□□□ 0.67
TRAF3IP1-202ENST00000391993 SERTAD1Q9UHV2 236 aa19.22■□□□□ 0.67
TRAF3IP1-202ENST00000391993 ADCY10Q96PN6 1610 aa19.22■□□□□ 0.67
TRAF3IP1-202ENST00000391993 ST3GAL1Q11201 340 aa19.22■□□□□ 0.67
TRAF3IP1-202ENST00000391993 SLC39A6Q13433 755 aa19.22■□□□□ 0.67
TRAF3IP1-202ENST00000391993 PLIN2Q99541 437 aa19.22■□□□□ 0.67
TRAF3IP1-202ENST00000391993 ATP10AO60312 1499 aa19.22■□□□□ 0.67
TRAF3IP1-202ENST00000391993 VWA3AA6NCI4 1184 aa19.22■□□□□ 0.67
TRAF3IP1-202ENST00000391993 E7EVH7 732 aa19.22■□□□□ 0.67
TRAF3IP1-202ENST00000391993 IFIT3O14879 490 aaKnown RBP19.22■□□□□ 0.67
TRAF3IP1-202ENST00000391993 OPA1O60313 960 aa19.22■□□□□ 0.67
TRAF3IP1-202ENST00000391993 CFAP58Q5T655 872 aa19.22■□□□□ 0.67
TRAF3IP1-202ENST00000391993 LINC00301Q8NCQ3 95 aa19.22■□□□□ 0.67
TRAF3IP1-202ENST00000391993 SUCLG2Q96I99 432 aa19.22■□□□□ 0.67
TRAF3IP1-202ENST00000391993 MRFAP1Q9Y605 127 aa19.22■□□□□ 0.67
TRAF3IP1-202ENST00000391993 PLXNC1O60486 1568 aa19.21■□□□□ 0.67
TRAF3IP1-202ENST00000391993 GUCY2FP51841 1108 aa19.21■□□□□ 0.67
TRAF3IP1-202ENST00000391993 GEMIN8Q9NWZ8 242 aaKnown RBP19.21■□□□□ 0.67
TRAF3IP1-202ENST00000391993 IQSEC2Q5JU85 1478 aa19.21■□□□□ 0.67
TRAF3IP1-202ENST00000391993 TTC37Q6PGP7 1564 aa19.21■□□□□ 0.67
TRAF3IP1-202ENST00000391993 AKR1B10O60218 316 aa19.21■□□□□ 0.67
TRAF3IP1-202ENST00000391993 RBL2Q08999 1139 aa19.21■□□□□ 0.67
TRAF3IP1-202ENST00000391993 PNKPQ96T60 521 aa19.21■□□□□ 0.67
TRAF3IP1-202ENST00000391993 SLC52A1Q9NWF4 448 aa19.21■□□□□ 0.67
TRAF3IP1-202ENST00000391993 CEP126Q9P2H0 1117 aa19.21■□□□□ 0.67
TRAF3IP1-202ENST00000391993 ARHGEF5Q12774 1597 aa19.21■□□□□ 0.67
TRAF3IP1-202ENST00000391993 ACEP12821 1306 aa19.21■□□□□ 0.67
TRAF3IP1-202ENST00000391993 CCDC178Q5BJE1 867 aa19.21■□□□□ 0.67
TRAF3IP1-202ENST00000391993 VEZTQ9HBM0 779 aa19.21■□□□□ 0.67
TRAF3IP1-202ENST00000391993 MED4Q9NPJ6 270 aa19.21■□□□□ 0.67
TRAF3IP1-202ENST00000391993 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.21■□□□□ 0.67
TRAF3IP1-202ENST00000391993 AKAP2Q9Y2D5 859 aa19.21■□□□□ 0.67
TRAF3IP1-202ENST00000391993 VPS37DQ86XT2 251 aa19.2■□□□□ 0.66
TRAF3IP1-202ENST00000391993 CNPY4Q8N129 248 aa19.2■□□□□ 0.66
TRAF3IP1-202ENST00000391993 MICAL1Q8TDZ2 1067 aa19.2■□□□□ 0.66
TRAF3IP1-202ENST00000391993 GOPCQ9HD26 462 aa19.2■□□□□ 0.66
TRAF3IP1-202ENST00000391993 HDAC6Q9UBN7 1215 aa19.2■□□□□ 0.66
TRAF3IP1-202ENST00000391993 CLSTN1O94985 981 aa19.2■□□□□ 0.66
TRAF3IP1-202ENST00000391993 GGCXP38435 758 aa19.2■□□□□ 0.66
TRAF3IP1-202ENST00000391993 IFFO1Q0D2I5 559 aa19.2■□□□□ 0.66
TRAF3IP1-202ENST00000391993 FMR1NBQ8N0W7 255 aaPredicted RBP19.2■□□□□ 0.66
TRAF3IP1-202ENST00000391993 MRPL44Q9H9J2 332 aaKnown RBP19.2■□□□□ 0.66
TRAF3IP1-202ENST00000391993 A0A1B0GUA9 196 aa19.2■□□□□ 0.66
TRAF3IP1-202ENST00000391993 FOXN1O15353 648 aa19.2■□□□□ 0.66
TRAF3IP1-202ENST00000391993 MARCH6O60337 910 aa19.2■□□□□ 0.66
TRAF3IP1-202ENST00000391993 PTPROQ16827 1216 aa19.2■□□□□ 0.66
TRAF3IP1-202ENST00000391993 CMTR1Q8N1G2 835 aaKnown RBP19.2■□□□□ 0.66
TRAF3IP1-202ENST00000391993 KCNJ14Q9UNX9 436 aa19.2■□□□□ 0.66
TRAF3IP1-202ENST00000391993 ZRANB2O95218 330 aaKnown RBP eCLIP19.19■□□□□ 0.66
TRAF3IP1-202ENST00000391993 CASP1P29466 404 aa19.19■□□□□ 0.66
TRAF3IP1-202ENST00000391993 SLC7A5Q01650 507 aa19.19■□□□□ 0.66
TRAF3IP1-202ENST00000391993 MSL1Q68DK7 614 aa19.19■□□□□ 0.66
TRAF3IP1-202ENST00000391993 CPLX4Q7Z7G2 160 aa19.19■□□□□ 0.66
TRAF3IP1-202ENST00000391993 ZKSCAN3Q9BRR0 538 aa19.19■□□□□ 0.66
TRAF3IP1-202ENST00000391993 LGR6Q9HBX8 967 aa19.19■□□□□ 0.66
TRAF3IP1-202ENST00000391993 CTNND2Q9UQB3 1225 aa19.19■□□□□ 0.66
TRAF3IP1-202ENST00000391993 SLC12A7Q9Y666 1083 aa19.19■□□□□ 0.66
TRAF3IP1-202ENST00000391993 NOP2P46087 812 aaKnown RBP19.19■□□□□ 0.66
TRAF3IP1-202ENST00000391993 TMEM67Q5HYA8 995 aa19.19■□□□□ 0.66
TRAF3IP1-202ENST00000391993 CNGA4Q8IV77 575 aa19.19■□□□□ 0.66
TRAF3IP1-202ENST00000391993 CABS1Q96KC9 395 aa19.19■□□□□ 0.66
TRAF3IP1-202ENST00000391993 hCG_1642624A0A1W2PR95 340 aa19.19■□□□□ 0.66
TRAF3IP1-202ENST00000391993 CKAP4Q07065 602 aaKnown RBP19.19■□□□□ 0.66
TRAF3IP1-202ENST00000391993 B4GALNT4Q76KP1 1039 aa19.19■□□□□ 0.66
TRAF3IP1-202ENST00000391993 E7EWF7 191 aa19.18■□□□□ 0.66
TRAF3IP1-202ENST00000391993 LRRC31Q6UY01 552 aa19.18■□□□□ 0.66
TRAF3IP1-202ENST00000391993 ANKRD13CQ8N6S4 541 aa19.18■□□□□ 0.66
TRAF3IP1-202ENST00000391993 NCOA7Q8NI08 942 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms