RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 SLC12A2P55011 1212 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 LIN9Q5TKA1 542 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 AFAP1Q8N556 730 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 ZKSCAN3Q9BRR0 538 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 CCDC94Q9BW85 323 aaPredicted RBP6.55□□□□□ -1.36
RFX3-204ENST00000382004 GOLGA6AQ9NYA3 693 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 BAG2O95816 211 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 IL1RL1Q01638 556 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 UBL4BQ8N7F7 174 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 MAGEB6P1A0A0J9YX57 407 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 AKR1B15C9JRZ8 316 aaPredicted RBP6.55□□□□□ -1.36
RFX3-204ENST00000382004 CHMP2AO43633 222 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 CALML3P27482 149 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 CUX1P39880 1505 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 TBC1D8O95759 1140 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 KRT15P19012 456 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 RPL13P26373 211 aaKnown RBP6.55□□□□□ -1.36
RFX3-204ENST00000382004 ASIC2Q16515 512 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 MUM1Q2TAK8 710 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 MAEAQ7L5Y9 396 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 NOC4LQ9BVI4 516 aaKnown RBP6.55□□□□□ -1.36
RFX3-204ENST00000382004 NOC2LQ9Y3T9 749 aaKnown RBP6.55□□□□□ -1.36
RFX3-204ENST00000382004 ZNF710Q8N1W2 664 aa6.55□□□□□ -1.36
RFX3-204ENST00000382004 RBM8AQ9Y5S9 174 aaKnown RBP6.55□□□□□ -1.36
RFX3-204ENST00000382004 ARHGAP42A6NI28 874 aa6.54□□□□□ -1.36
RFX3-204ENST00000382004 CDR2Q01850 454 aa6.54□□□□□ -1.36
RFX3-204ENST00000382004 PLCB4Q15147 1175 aa6.54□□□□□ -1.36
RFX3-204ENST00000382004 SPOUT1Q5T280 376 aaKnown RBP6.54□□□□□ -1.36
RFX3-204ENST00000382004 C4orf50Q6ZRC1 276 aa6.54□□□□□ -1.36
RFX3-204ENST00000382004 VPS16Q9H269 839 aa6.54□□□□□ -1.36
RFX3-204ENST00000382004 TPX2Q9ULW0 747 aaKnown RBP6.54□□□□□ -1.36
RFX3-204ENST00000382004 USH1CQ9Y6N9 552 aa6.54□□□□□ -1.36
RFX3-204ENST00000382004 GPIHBP1Q8IV16 184 aa6.54□□□□□ -1.36
RFX3-204ENST00000382004 CHMP6Q96FZ7 201 aa6.54□□□□□ -1.36
RFX3-204ENST00000382004 PTPRCP08575 1304 aa6.54□□□□□ -1.36
RFX3-204ENST00000382004 ATP6V1E1P36543 226 aa6.54□□□□□ -1.36
RFX3-204ENST00000382004 TTC22Q5TAA0 569 aa6.54□□□□□ -1.36
RFX3-204ENST00000382004 ANO3Q9BYT9 981 aa6.54□□□□□ -1.36
RFX3-204ENST00000382004 BAIAP2L1Q9UHR4 511 aa6.54□□□□□ -1.36
RFX3-204ENST00000382004 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.54□□□□□ -1.36
RFX3-204ENST00000382004 NAIPQ13075 1403 aa6.54□□□□□ -1.36
RFX3-204ENST00000382004 KRT3P12035 628 aa6.54□□□□□ -1.36
RFX3-204ENST00000382004 WHAMMP3Q1A5X7 153 aa6.54□□□□□ -1.36
RFX3-204ENST00000382004 POTEDQ86YR6 584 aa6.54□□□□□ -1.36
RFX3-204ENST00000382004 RXRAP19793 462 aa6.54□□□□□ -1.36
RFX3-204ENST00000382004 KSR1Q8IVT5 923 aa6.54□□□□□ -1.36
RFX3-204ENST00000382004 SPDL1Q96EA4 605 aa6.54□□□□□ -1.36
RFX3-204ENST00000382004 RBSNQ9H1K0 784 aa6.54□□□□□ -1.36
RFX3-204ENST00000382004 OGFRQ9NZT2 677 aa6.54□□□□□ -1.36
RFX3-204ENST00000382004 VWA3AA6NCI4 1184 aa6.54□□□□□ -1.36
RFX3-204ENST00000382004 ANKRD20A3Q5VUR7 823 aa6.54□□□□□ -1.36
RFX3-204ENST00000382004 CNGA4Q8IV77 575 aa6.54□□□□□ -1.36
RFX3-204ENST00000382004 KLHL7Q8IXQ5 586 aa6.54□□□□□ -1.36
RFX3-204ENST00000382004 NAPGQ99747 312 aaPredicted RBP6.54□□□□□ -1.36
RFX3-204ENST00000382004 RIOK1Q9BRS2 568 aaKnown RBP6.54□□□□□ -1.36
RFX3-204ENST00000382004 ZBTB24O43167 697 aaPredicted RBP6.53□□□□□ -1.36
RFX3-204ENST00000382004 PHEXP78562 749 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 MCMDC2Q4G0Z9 681 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 EP400NLQ6ZTU2 488 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 SV2BQ7L1I2 683 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 IFT20Q8IY31 132 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 SETDB2Q96T68 719 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 PSMB7Q99436 277 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 RBM28Q9NW13 759 aaKnown RBP6.53□□□□□ -1.36
RFX3-204ENST00000382004 ATAD2Q6PL18 1390 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 RTL9Q8NET4 1388 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 XRCC6P12956 609 aaKnown RBP eCLIP6.53□□□□□ -1.36
RFX3-204ENST00000382004 STRN3Q13033 797 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 LGSNQ5TDP6 509 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 DCUN1D2Q6PH85 259 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 ZMAT2Q96NC0 199 aaKnown RBP6.53□□□□□ -1.36
RFX3-204ENST00000382004 PI4KAP2A4QPH2 592 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 TUBB4AP04350 444 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 LONRF3Q496Y0 759 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 BEND3Q5T5X7 828 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 PI4KAP1Q8N8J0 262 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 ANKRD42Q8N9B4 389 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 MICAL1Q8TDZ2 1067 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 NAP1L4Q99733 375 aaKnown RBP6.53□□□□□ -1.36
RFX3-204ENST00000382004 HAUS8Q9BT25 410 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 PLEKHA4Q9H4M7 779 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 HAUS2Q9NVX0 235 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 NKTRP30414 1462 aaKnown RBP6.53□□□□□ -1.36
RFX3-204ENST00000382004 SLC9C2Q5TAH2 1124 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 PPP4R4Q6NUP7 873 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 MCM9Q9NXL9 1143 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 MAPK8IP1Q9UQF2 711 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 ANXA1P04083 346 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 SMTNP53814 917 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 SESN3P58005 492 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 TSTA3Q13630 321 aaPredicted RBP6.53□□□□□ -1.36
RFX3-204ENST00000382004 ZNF804AQ7Z570 1209 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 PPP4R1Q8TF05 950 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 ATP2A3Q93084 1043 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 CABS1Q96KC9 395 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 SCYL1Q96KG9 808 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 EFCC1Q9HA90 598 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 GPHNQ9NQX3 736 aaPredicted RBP6.53□□□□□ -1.36
RFX3-204ENST00000382004 BAG5Q9UL15 447 aa6.53□□□□□ -1.36
RFX3-204ENST00000382004 FGD6Q6ZV73 1430 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms