RNA–Protein interactions for RNA: ENST00000381254.6

GEN1-202, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GEN1, Length 6,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-202ENST00000381254 PXDNQ92626 1479 aa6.37□□□□□ -1.39
GEN1-202ENST00000381254 CA8P35219 290 aa6.37□□□□□ -1.39
GEN1-202ENST00000381254 ATP2B2Q01814 1243 aa6.37□□□□□ -1.39
GEN1-202ENST00000381254 SP3Q02447 781 aa6.37□□□□□ -1.39
GEN1-202ENST00000381254 TMCO3Q6UWJ1 677 aa6.37□□□□□ -1.39
GEN1-202ENST00000381254 FASTKD5Q7L8L6 764 aaKnown RBP6.37□□□□□ -1.39
GEN1-202ENST00000381254 UBE2Q2Q8WVN8 375 aa6.37□□□□□ -1.39
GEN1-202ENST00000381254 CCDC43Q96MW1 224 aaKnown RBP6.37□□□□□ -1.39
GEN1-202ENST00000381254 USP42Q9H9J4 1324 aaKnown RBP6.36□□□□□ -1.39
GEN1-202ENST00000381254 GOLGA6L10A0A0M3HER8 536 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 KIAA0754O94854 1291 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 APPP05067 770 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 HTRA3P83110 453 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 IFI16Q16666 785 aaKnown RBP6.36□□□□□ -1.39
GEN1-202ENST00000381254 DOK7Q18PE1 504 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 HINFPQ9BQA5 517 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 FBXO3Q9UK99 471 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 STK24Q9Y6E0 443 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 IBTKQ9P2D0 1353 aaPredicted RBP6.36□□□□□ -1.39
GEN1-202ENST00000381254 COL5A2P05997 1499 aaPredicted RBP6.36□□□□□ -1.39
GEN1-202ENST00000381254 GNRH1P01148 92 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 GYS1P13807 737 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 AMPD3Q01432 767 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 KCNG4Q8TDN1 519 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 CDCA7LQ96GN5 454 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 EYA1Q99502 592 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 SAGE1Q9NXZ1 904 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 LAMC1P11047 1609 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 ERBB4Q15303 1308 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 DCDC2CA8MYV0 355 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 CASTP20810 708 aaKnown RBP6.36□□□□□ -1.39
GEN1-202ENST00000381254 PRPHP41219 470 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 CHMP4BP1P59074 171 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 NUCB1Q02818 461 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 CLUL1Q15846 466 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 RRP12Q5JTH9 1297 aaKnown RBP6.36□□□□□ -1.39
GEN1-202ENST00000381254 SH2D4AQ9H788 454 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 ATG3Q9NT62 314 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 NHSL1Q5SYE7 1610 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 STX1AQ16623 288 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 STXBP4Q6ZWJ1 553 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 SSH1Q8WYL5 1049 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 PCMTD1Q96MG8 357 aaPredicted RBP6.36□□□□□ -1.39
GEN1-202ENST00000381254 ELL2O00472 640 aaPredicted RBP6.36□□□□□ -1.39
GEN1-202ENST00000381254 FYB1O15117 783 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 BAG3O95817 575 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 POTEJP0CG39 1038 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 ZBED2Q9BTP6 218 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 CNNM2Q9H8M5 875 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 GGA3Q9NZ52 723 aa6.36□□□□□ -1.39
GEN1-202ENST00000381254 USO1O60763 962 aaKnown RBP6.35□□□□□ -1.39
GEN1-202ENST00000381254 FAM200AQ8TCP9 573 aa6.35□□□□□ -1.39
GEN1-202ENST00000381254 TBC1D22AQ8WUA7 517 aa6.35□□□□□ -1.39
GEN1-202ENST00000381254 PPM1EQ8WY54 764 aa6.35□□□□□ -1.39
GEN1-202ENST00000381254 RNF208Q9H0X6 261 aa6.35□□□□□ -1.39
GEN1-202ENST00000381254 DCTPP1Q9H773 170 aa6.35□□□□□ -1.39
GEN1-202ENST00000381254 PRAMEF22A3QJZ6 481 aa6.35□□□□□ -1.39
GEN1-202ENST00000381254 SRGAP3O43295 1099 aa6.35□□□□□ -1.39
GEN1-202ENST00000381254 PTPN14Q15678 1187 aa6.35□□□□□ -1.39
GEN1-202ENST00000381254 ELMSAN1Q6PJG2 1045 aa6.35□□□□□ -1.39
GEN1-202ENST00000381254 FAM122AQ96E09 287 aa6.35□□□□□ -1.39
GEN1-202ENST00000381254 CDK5RAP3Q96JB5 506 aa6.35□□□□□ -1.39
GEN1-202ENST00000381254 CRAMP1Q96RY5 1269 aa6.35□□□□□ -1.39
GEN1-202ENST00000381254 R3HCC1Q9Y3T6 440 aaKnown RBP6.35□□□□□ -1.39
GEN1-202ENST00000381254 IRS4O14654 1257 aaPredicted RBP6.35□□□□□ -1.39
GEN1-202ENST00000381254 TRIM21P19474 475 aaKnown RBP6.35□□□□□ -1.39
GEN1-202ENST00000381254 CKAP4Q07065 602 aaKnown RBP6.35□□□□□ -1.39
GEN1-202ENST00000381254 TTC22Q5TAA0 569 aa6.35□□□□□ -1.39
GEN1-202ENST00000381254 ARFGAP2Q8N6H7 521 aa6.35□□□□□ -1.39
GEN1-202ENST00000381254 TM6SF1Q9BZW5 370 aa6.35□□□□□ -1.39
GEN1-202ENST00000381254 GLT8D2Q9H1C3 349 aa6.35□□□□□ -1.39
GEN1-202ENST00000381254 CD163L1Q9NR16 1453 aa6.35□□□□□ -1.39
GEN1-202ENST00000381254 FARP2O94887 1054 aaPredicted RBP6.35□□□□□ -1.39
GEN1-202ENST00000381254 CALM1P0DP23 149 aa6.35□□□□□ -1.39
GEN1-202ENST00000381254 CALM2P0DP24 149 aa6.35□□□□□ -1.39
GEN1-202ENST00000381254 CALM3P0DP25 149 aa6.35□□□□□ -1.39
GEN1-202ENST00000381254 SSTR3P32745 418 aaPredicted RBP6.35□□□□□ -1.39
GEN1-202ENST00000381254 CEP128Q6ZU80 1094 aa6.35□□□□□ -1.39
GEN1-202ENST00000381254 TLL2Q9Y6L7 1015 aa6.35□□□□□ -1.39
GEN1-202ENST00000381254 IVLP07476 585 aa6.35□□□□□ -1.39
GEN1-202ENST00000381254 GBP2P32456 591 aaPredicted RBP6.35□□□□□ -1.39
GEN1-202ENST00000381254 EPS15P42566 896 aa6.35□□□□□ -1.39
GEN1-202ENST00000381254 METTL24Q5JXM2 366 aa6.35□□□□□ -1.39
GEN1-202ENST00000381254 ZNF790Q6PG37 636 aa6.35□□□□□ -1.39
GEN1-202ENST00000381254 PLVAPQ9BX97 442 aa6.35□□□□□ -1.39
GEN1-202ENST00000381254 GLIS2Q9BZE0 524 aaPredicted RBP6.35□□□□□ -1.39
GEN1-202ENST00000381254 EHMT1Q9H9B1 1298 aa6.35□□□□□ -1.39
GEN1-202ENST00000381254 KIF3CO14782 793 aa6.34□□□□□ -1.39
GEN1-202ENST00000381254 SERPINC1P01008 464 aa6.34□□□□□ -1.39
GEN1-202ENST00000381254 HSPA8P11142 646 aaKnown RBP6.34□□□□□ -1.39
GEN1-202ENST00000381254 EZRP15311 586 aaKnown RBP6.34□□□□□ -1.39
GEN1-202ENST00000381254 PLS1Q14651 629 aa6.34□□□□□ -1.39
GEN1-202ENST00000381254 LRSAM1Q6UWE0 723 aa6.34□□□□□ -1.39
GEN1-202ENST00000381254 CCDC85AQ96PX6 553 aaPredicted RBP6.34□□□□□ -1.39
GEN1-202ENST00000381254 LLPHQ9BRT6 129 aaKnown RBP6.34□□□□□ -1.39
GEN1-202ENST00000381254 UBAC1Q9BSL1 405 aa6.34□□□□□ -1.39
GEN1-202ENST00000381254 DBNDD1Q9H9R9 158 aa6.34□□□□□ -1.39
GEN1-202ENST00000381254 RAI14Q9P0K7 980 aa6.34□□□□□ -1.39
GEN1-202ENST00000381254 CDHR2Q9BYE9 1310 aa6.34□□□□□ -1.39
GEN1-202ENST00000381254 CCDC69A6NI79 296 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms