RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 HMMRO75330 724 aa11.38□□□□□ -0.59
HMGN1-202ENST00000380747 PHKA1P46020 1223 aa11.38□□□□□ -0.59
HMGN1-202ENST00000380747 SCARF1Q14162 830 aa11.38□□□□□ -0.59
HMGN1-202ENST00000380747 E2F4Q16254 413 aa11.38□□□□□ -0.59
HMGN1-202ENST00000380747 GORABQ5T7V8 394 aa11.38□□□□□ -0.59
HMGN1-202ENST00000380747 RGMBQ6NW40 437 aa11.38□□□□□ -0.59
HMGN1-202ENST00000380747 DCPSQ96C86 337 aaKnown RBP11.38□□□□□ -0.59
HMGN1-202ENST00000380747 XAGE2Q96GT9 111 aa11.38□□□□□ -0.59
HMGN1-202ENST00000380747 ZNF408Q9H9D4 720 aa11.38□□□□□ -0.59
HMGN1-202ENST00000380747 GGA3Q9NZ52 723 aa11.38□□□□□ -0.59
HMGN1-202ENST00000380747 EXOC6BQ9Y2D4 811 aa11.38□□□□□ -0.59
HMGN1-202ENST00000380747 NOP58Q9Y2X3 529 aaKnown RBP11.38□□□□□ -0.59
HMGN1-202ENST00000380747 APBB1O00213 710 aa11.37□□□□□ -0.59
HMGN1-202ENST00000380747 IRX5P78411 483 aaPredicted RBP11.37□□□□□ -0.59
HMGN1-202ENST00000380747 DLGAP5Q15398 846 aa11.37□□□□□ -0.59
HMGN1-202ENST00000380747 IER5LQ5T953 404 aa11.37□□□□□ -0.59
HMGN1-202ENST00000380747 ANGEL2Q5VTE6 544 aaKnown RBP11.37□□□□□ -0.59
HMGN1-202ENST00000380747 CCDC102BQ68D86 513 aa11.37□□□□□ -0.59
HMGN1-202ENST00000380747 USP48Q86UV5 1035 aa11.37□□□□□ -0.59
HMGN1-202ENST00000380747 TBC1D22AQ8WUA7 517 aa11.37□□□□□ -0.59
HMGN1-202ENST00000380747 ADM5C9JUS6 153 aa11.36□□□□□ -0.59
HMGN1-202ENST00000380747 MMP14P50281 582 aa11.36□□□□□ -0.59
HMGN1-202ENST00000380747 RBM5P52756 815 aaKnown RBP eCLIP11.36□□□□□ -0.59
HMGN1-202ENST00000380747 NBPF9Q3BBW0 867 aa11.36□□□□□ -0.59
HMGN1-202ENST00000380747 CFAP100Q494V2 611 aa11.36□□□□□ -0.59
HMGN1-202ENST00000380747 HSP90AB4PQ58FF6 505 aa11.36□□□□□ -0.59
HMGN1-202ENST00000380747 TNNI3KQ59H18 835 aa11.36□□□□□ -0.59
HMGN1-202ENST00000380747 PRPF38BQ5VTL8 546 aaKnown RBP11.36□□□□□ -0.59
HMGN1-202ENST00000380747 KRT26Q7Z3Y9 468 aa11.36□□□□□ -0.59
HMGN1-202ENST00000380747 ERC1Q8IUD2 1116 aa11.36□□□□□ -0.59
HMGN1-202ENST00000380747 SULF1Q8IWU6 871 aa11.36□□□□□ -0.59
HMGN1-202ENST00000380747 SIRT2Q8IXJ6 389 aa11.36□□□□□ -0.59
HMGN1-202ENST00000380747 C2orf69Q8N8R5 385 aa11.36□□□□□ -0.59
HMGN1-202ENST00000380747 CRBNQ96SW2 442 aa11.36□□□□□ -0.59
HMGN1-202ENST00000380747 BCL11AQ9H165 835 aa11.36□□□□□ -0.59
HMGN1-202ENST00000380747 OCEL1Q9H607 264 aa11.36□□□□□ -0.59
HMGN1-202ENST00000380747 GBA2Q9HCG7 927 aaPredicted RBP11.36□□□□□ -0.59
HMGN1-202ENST00000380747 GPR108Q9NPR9 543 aa11.36□□□□□ -0.59
HMGN1-202ENST00000380747 DENND2AQ9ULE3 1009 aa11.36□□□□□ -0.59
HMGN1-202ENST00000380747 TTF2Q9UNY4 1162 aaKnown RBP11.36□□□□□ -0.59
HMGN1-202ENST00000380747 FPGT-TNNI3KV9GXZ4 949 aa11.36□□□□□ -0.59
HMGN1-202ENST00000380747 ZNF646O15015 1829 aaPredicted RBP11.36□□□□□ -0.59
HMGN1-202ENST00000380747 WNT10BO00744 389 aa11.35□□□□□ -0.59
HMGN1-202ENST00000380747 SEMA3EO15041 775 aa11.35□□□□□ -0.59
HMGN1-202ENST00000380747 KIF23Q02241 960 aaPredicted RBP11.35□□□□□ -0.59
HMGN1-202ENST00000380747 MFSD10Q14728 455 aa11.35□□□□□ -0.59
HMGN1-202ENST00000380747 GRIK5Q16478 980 aa11.35□□□□□ -0.59
HMGN1-202ENST00000380747 DLK2Q6UY11 383 aa11.35□□□□□ -0.59
HMGN1-202ENST00000380747 WDR66Q8TBY9 1149 aa11.35□□□□□ -0.59
HMGN1-202ENST00000380747 DBNDD2Q9BQY9 259 aa11.35□□□□□ -0.59
HMGN1-202ENST00000380747 RNF186Q9NXI6 227 aa11.35□□□□□ -0.59
HMGN1-202ENST00000380747 PCDHAC2Q9Y5I4 1007 aa11.35□□□□□ -0.59
HMGN1-202ENST00000380747 COL1A1P02452 1464 aaPredicted RBP11.35□□□□□ -0.59
HMGN1-202ENST00000380747 MKI67P46013 3256 aaKnown RBP11.35□□□□□ -0.59
HMGN1-202ENST00000380747 HTTP42858 3142 aa11.34□□□□□ -0.59
HMGN1-202ENST00000380747 SLC10A3P09131 477 aa11.34□□□□□ -0.59
HMGN1-202ENST00000380747 CTU1Q7Z7A3 348 aaKnown RBP11.34□□□□□ -0.59
HMGN1-202ENST00000380747 DDX27Q96GQ7 796 aaKnown RBP11.34□□□□□ -0.59
HMGN1-202ENST00000380747 DCBLD2Q96PD2 775 aa11.34□□□□□ -0.59
HMGN1-202ENST00000380747 CCDC8Q9H0W5 538 aaPredicted RBP11.34□□□□□ -0.59
HMGN1-202ENST00000380747 IL1RAPL2Q9NP60 686 aa11.34□□□□□ -0.59
HMGN1-202ENST00000380747 SCAF8Q9UPN6 1271 aaKnown RBP11.34□□□□□ -0.59
HMGN1-202ENST00000380747 SUPT16HQ9Y5B9 1047 aaKnown RBP11.34□□□□□ -0.59
HMGN1-202ENST00000380747 ARAP2Q8WZ64 1704 aa11.33□□□□□ -0.6
HMGN1-202ENST00000380747 CLRN2A0PK11 232 aa11.33□□□□□ -0.6
HMGN1-202ENST00000380747 MYO1BO43795 1136 aa11.33□□□□□ -0.6
HMGN1-202ENST00000380747 RAB11FIP3O75154 756 aa11.33□□□□□ -0.6
HMGN1-202ENST00000380747 UQCRFS1P1P0C7P4 283 aa11.33□□□□□ -0.6
HMGN1-202ENST00000380747 CRKP46108 304 aa11.33□□□□□ -0.6
HMGN1-202ENST00000380747 ZNF157P51786 506 aaPredicted RBP11.33□□□□□ -0.6
HMGN1-202ENST00000380747 RASGRF1Q13972 1273 aa11.33□□□□□ -0.6
HMGN1-202ENST00000380747 CCDC158Q5M9N0 1113 aa11.33□□□□□ -0.6
HMGN1-202ENST00000380747 TTC39AQ5SRH9 613 aa11.33□□□□□ -0.6
HMGN1-202ENST00000380747 AACSQ86V21 672 aa11.33□□□□□ -0.6
HMGN1-202ENST00000380747 MTMR14Q8NCE2 650 aa11.33□□□□□ -0.6
HMGN1-202ENST00000380747 RHPN1Q8TCX5 695 aa11.33□□□□□ -0.6
HMGN1-202ENST00000380747 ZBED3Q96IU2 234 aaPredicted RBP11.33□□□□□ -0.6
HMGN1-202ENST00000380747 CSRNP1Q96S65 589 aa11.33□□□□□ -0.6
HMGN1-202ENST00000380747 TLR7Q9NYK1 1049 aaKnown RBP11.33□□□□□ -0.6
HMGN1-202ENST00000380747 MAST3O60307 1309 aa11.33□□□□□ -0.6
HMGN1-202ENST00000380747 PITPNM2Q9BZ72 1349 aa11.33□□□□□ -0.6
HMGN1-202ENST00000380747 TRPA1O75762 1119 aa11.32□□□□□ -0.6
HMGN1-202ENST00000380747 LDHBP07195 334 aaKnown RBP11.32□□□□□ -0.6
HMGN1-202ENST00000380747 SOX10P56693 466 aa11.32□□□□□ -0.6
HMGN1-202ENST00000380747 FKBP1BP68106 108 aa11.32□□□□□ -0.6
HMGN1-202ENST00000380747 PKN2Q16513 984 aaKnown RBP11.32□□□□□ -0.6
HMGN1-202ENST00000380747 APOBEC3FQ8IUX4 373 aaKnown RBP11.32□□□□□ -0.6
HMGN1-202ENST00000380747 TEKT1Q969V4 418 aa11.32□□□□□ -0.6
HMGN1-202ENST00000380747 EAF2Q96CJ1 260 aaPredicted RBP11.32□□□□□ -0.6
HMGN1-202ENST00000380747 KIF1BPQ96EK5 621 aa11.32□□□□□ -0.6
HMGN1-202ENST00000380747 CDCA5Q96FF9 252 aa11.32□□□□□ -0.6
HMGN1-202ENST00000380747 PRMT6Q96LA8 375 aaPredicted RBP11.32□□□□□ -0.6
HMGN1-202ENST00000380747 VEZTQ9HBM0 779 aa11.32□□□□□ -0.6
HMGN1-202ENST00000380747 HMG20BQ9P0W2 317 aa11.32□□□□□ -0.6
HMGN1-202ENST00000380747 ABCF2Q9UG63 623 aa11.32□□□□□ -0.6
HMGN1-202ENST00000380747 DBNLQ9UJU6 430 aaKnown RBP11.32□□□□□ -0.6
HMGN1-202ENST00000380747 SERPINA10Q9UK55 444 aa11.32□□□□□ -0.6
HMGN1-202ENST00000380747 SUGT1Q9Y2Z0 365 aa11.32□□□□□ -0.6
HMGN1-202ENST00000380747 SALL1Q9NSC2 1324 aa11.32□□□□□ -0.6
HMGN1-202ENST00000380747 PLCG2P16885 1265 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms