RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 OGFOD3Q6PK18 319 aa8.12□□□□□ -1.11
PMS1-202ENST00000374826 CORO1BQ9BR76 489 aa8.12□□□□□ -1.11
PMS1-202ENST00000374826 TRIM56Q9BRZ2 755 aaKnown RBP8.12□□□□□ -1.11
PMS1-202ENST00000374826 CC2D2AQ9P2K1 1620 aa8.11□□□□□ -1.11
PMS1-202ENST00000374826 B3GALT4O96024 378 aa8.11□□□□□ -1.11
PMS1-202ENST00000374826 PDE4CQ08493 712 aa8.11□□□□□ -1.11
PMS1-202ENST00000374826 AP4E1Q9UPM8 1137 aa8.11□□□□□ -1.11
PMS1-202ENST00000374826 DYNC1LI2O43237 492 aaPredicted RBP8.1□□□□□ -1.11
PMS1-202ENST00000374826 AOC2O75106 756 aa8.1□□□□□ -1.11
PMS1-202ENST00000374826 SERPINB4P48594 390 aa8.1□□□□□ -1.11
PMS1-202ENST00000374826 LCE1DQ5T752 114 aa8.1□□□□□ -1.11
PMS1-202ENST00000374826 USPL1Q5W0Q7 1092 aa8.1□□□□□ -1.11
PMS1-202ENST00000374826 BCL7CQ8WUZ0 217 aaPredicted RBP8.1□□□□□ -1.11
PMS1-202ENST00000374826 EGFL7Q9UHF1 273 aa8.1□□□□□ -1.11
PMS1-202ENST00000374826 SYNGAP1Q96PV0 1343 aa8.09□□□□□ -1.11
PMS1-202ENST00000374826 NEFLP07196 543 aa8.09□□□□□ -1.11
PMS1-202ENST00000374826 C8AP07357 584 aa8.09□□□□□ -1.11
PMS1-202ENST00000374826 JAG1P78504 1218 aa8.09□□□□□ -1.11
PMS1-202ENST00000374826 ZNF576Q9H609 170 aa8.09□□□□□ -1.11
PMS1-202ENST00000374826 LGR6Q9HBX8 967 aa8.09□□□□□ -1.11
PMS1-202ENST00000374826 PPP1R9AQ9ULJ8 1098 aa8.09□□□□□ -1.11
PMS1-202ENST00000374826 SLC5A6Q9Y289 635 aa8.09□□□□□ -1.11
PMS1-202ENST00000374826 H3BRB1 525 aa8.08□□□□□ -1.12
PMS1-202ENST00000374826 ITPKAP23677 461 aa8.08□□□□□ -1.12
PMS1-202ENST00000374826 TUT1Q9H6E5 874 aaKnown RBP8.08□□□□□ -1.12
PMS1-202ENST00000374826 DAGLAQ9Y4D2 1042 aa8.08□□□□□ -1.12
PMS1-202ENST00000374826 ICMTO60725 284 aa8.07□□□□□ -1.12
PMS1-202ENST00000374826 ECM1Q16610 540 aa8.07□□□□□ -1.12
PMS1-202ENST00000374826 CYP27C1Q4G0S4 372 aa8.07□□□□□ -1.12
PMS1-202ENST00000374826 SPRED2Q7Z698 418 aa8.07□□□□□ -1.12
PMS1-202ENST00000374826 WDR18Q9BV38 432 aa8.07□□□□□ -1.12
PMS1-202ENST00000374826 EHD4Q9H223 541 aa8.07□□□□□ -1.12
PMS1-202ENST00000374826 BRPF3Q9ULD4 1205 aa8.07□□□□□ -1.12
PMS1-202ENST00000374826 ARID1BQ8NFD5 2236 aaPredicted RBP8.06□□□□□ -1.12
PMS1-202ENST00000374826 PTPN12Q05209 780 aaKnown RBP8.06□□□□□ -1.12
PMS1-202ENST00000374826 PDE3AQ14432 1141 aa8.06□□□□□ -1.12
PMS1-202ENST00000374826 GLYCTKQ8IVS8 523 aa8.06□□□□□ -1.12
PMS1-202ENST00000374826 STK11IPQ8N1F8 1099 aa8.06□□□□□ -1.12
PMS1-202ENST00000374826 SMARCA4P51532 1647 aa8.06□□□□□ -1.12
PMS1-202ENST00000374826 PAPLNO95428 1278 aa8.05□□□□□ -1.12
PMS1-202ENST00000374826 AP3B2Q13367 1082 aa8.05□□□□□ -1.12
PMS1-202ENST00000374826 ZNF574Q6ZN55 896 aaPredicted RBP8.05□□□□□ -1.12
PMS1-202ENST00000374826 TXNDC2Q86VQ3 553 aa8.05□□□□□ -1.12
PMS1-202ENST00000374826 WFDC3Q8IUB2 231 aa8.05□□□□□ -1.12
PMS1-202ENST00000374826 BNIP3Q12983 259 aa8.04□□□□□ -1.12
PMS1-202ENST00000374826 PLCL1Q15111 1095 aa8.04□□□□□ -1.12
PMS1-202ENST00000374826 ZNF792Q3KQV3 632 aa8.04□□□□□ -1.12
PMS1-202ENST00000374826 WDR89Q96FK6 387 aaPredicted RBP8.04□□□□□ -1.12
PMS1-202ENST00000374826 CRIM1Q9NZV1 1036 aa8.04□□□□□ -1.12
PMS1-202ENST00000374826 BIN1O00499 593 aa8.03□□□□□ -1.12
PMS1-202ENST00000374826 CPNE3O75131 537 aaKnown RBP8.03□□□□□ -1.12
PMS1-202ENST00000374826 SLFN14P0C7P3 912 aa8.03□□□□□ -1.12
PMS1-202ENST00000374826 LIG1P18858 919 aa8.03□□□□□ -1.12
PMS1-202ENST00000374826 ORC1Q13415 861 aa8.03□□□□□ -1.12
PMS1-202ENST00000374826 RPS26P11Q5JNZ5 115 aaPredicted RBP8.03□□□□□ -1.12
PMS1-202ENST00000374826 MISP3Q96FF7 219 aa8.03□□□□□ -1.12
PMS1-202ENST00000374826 NPHS2Q9NP85 383 aa8.03□□□□□ -1.12
PMS1-202ENST00000374826 CECR2Q9BXF3 1484 aa8.02□□□□□ -1.13
PMS1-202ENST00000374826 TMPRSS2O15393 492 aa8.02□□□□□ -1.13
PMS1-202ENST00000374826 PDE3BQ13370 1112 aa8.02□□□□□ -1.13
PMS1-202ENST00000374826 CCER1Q8TC90 406 aaPredicted RBP8.02□□□□□ -1.13
PMS1-202ENST00000374826 CCDC86Q9H6F5 360 aaKnown RBP8.02□□□□□ -1.13
PMS1-202ENST00000374826 CARMIL2Q6F5E8 1435 aa8.02□□□□□ -1.13
PMS1-202ENST00000374826 TMEM238LA0A1B0GVL6 79 aa8.01□□□□□ -1.13
PMS1-202ENST00000374826 FAM87AP0C7U9 286 aa8.01□□□□□ -1.13
PMS1-202ENST00000374826 ARHGAP4P98171 946 aa8.01□□□□□ -1.13
PMS1-202ENST00000374826 CDK5R2Q13319 367 aa8.01□□□□□ -1.13
PMS1-202ENST00000374826 NETO1Q8TDF5 533 aa8.01□□□□□ -1.13
PMS1-202ENST00000374826 FANCD2OSQ96PS1 177 aa8.01□□□□□ -1.13
PMS1-202ENST00000374826 ABCB6Q9NP58 842 aa8.01□□□□□ -1.13
PMS1-202ENST00000374826 DISC1Q9NRI5 854 aa8.01□□□□□ -1.13
PMS1-202ENST00000374826 BAZ1AQ9NRL2 1556 aaPredicted RBP8.01□□□□□ -1.13
PMS1-202ENST00000374826 ZNF157P51786 506 aaPredicted RBP8□□□□□ -1.13
PMS1-202ENST00000374826 ID3Q02535 119 aa8□□□□□ -1.13
PMS1-202ENST00000374826 PRPF40BQ6NWY9 871 aaKnown RBP8□□□□□ -1.13
PMS1-202ENST00000374826 PLD6Q8N2A8 252 aaKnown RBP8□□□□□ -1.13
PMS1-202ENST00000374826 CCDC74AQ96AQ1 378 aa8□□□□□ -1.13
PMS1-202ENST00000374826 CITED4Q96RK1 184 aa8□□□□□ -1.13
PMS1-202ENST00000374826 FAM129BQ96TA1 746 aa8□□□□□ -1.13
PMS1-202ENST00000374826 ZC3H12CQ9C0D7 883 aaKnown RBP8□□□□□ -1.13
PMS1-202ENST00000374826 ATXN3LQ9H3M9 355 aa8□□□□□ -1.13
PMS1-202ENST00000374826 PIDD1Q9HB75 910 aa8□□□□□ -1.13
PMS1-202ENST00000374826 VAV3Q9UKW4 847 aa8□□□□□ -1.13
PMS1-202ENST00000374826 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8□□□□□ -1.13
PMS1-202ENST00000374826 NDUFB5O43674 189 aa7.99□□□□□ -1.13
PMS1-202ENST00000374826 ZNF862O60290 1169 aa7.99□□□□□ -1.13
PMS1-202ENST00000374826 CD8BP10966 210 aa7.99□□□□□ -1.13
PMS1-202ENST00000374826 FUT4P22083 530 aa7.99□□□□□ -1.13
PMS1-202ENST00000374826 FAAP100Q0VG06 881 aa7.99□□□□□ -1.13
PMS1-202ENST00000374826 ATG4DQ86TL0 474 aaPredicted RBP7.99□□□□□ -1.13
PMS1-202ENST00000374826 SMYD4Q8IYR2 804 aaPredicted RBP7.99□□□□□ -1.13
PMS1-202ENST00000374826 FAM181AQ8N9Y4 354 aa7.99□□□□□ -1.13
PMS1-202ENST00000374826 DNAJC25Q9H1X3 360 aa7.99□□□□□ -1.13
PMS1-202ENST00000374826 EIF1AYO14602 144 aaKnown RBP7.98□□□□□ -1.13
PMS1-202ENST00000374826 GADD45BO75293 160 aaPredicted RBP7.98□□□□□ -1.13
PMS1-202ENST00000374826 BRD1O95696 1058 aa7.98□□□□□ -1.13
PMS1-202ENST00000374826 PRKCQQ04759 706 aa7.98□□□□□ -1.13
PMS1-202ENST00000374826 KIF4BQ2VIQ3 1234 aa7.98□□□□□ -1.13
PMS1-202ENST00000374826 ZNF648Q5T619 568 aaPredicted RBP7.98□□□□□ -1.13
PMS1-202ENST00000374826 GLIS3Q8NEA6 775 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms