RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 PCDHA7Q9UN72 937 aa21.01■□□□□ 0.95
CD40-201ENST00000372276 NID2Q14112 1375 aa21.01■□□□□ 0.95
CD40-201ENST00000372276 C4AP0C0L4 1744 aa21.01■□□□□ 0.95
CD40-201ENST00000372276 C4BP0C0L5 1744 aa21.01■□□□□ 0.95
CD40-201ENST00000372276 SPATA31A5Q5VU36 1347 aa21■□□□□ 0.95
CD40-201ENST00000372276 SPATA31A7Q8IWB4 1347 aa21■□□□□ 0.95
CD40-201ENST00000372276 NEMFO60524 1076 aa21■□□□□ 0.95
CD40-201ENST00000372276 ZNF75DP51815 510 aa21■□□□□ 0.95
CD40-201ENST00000372276 PPP2R5BQ15173 497 aa21■□□□□ 0.95
CD40-201ENST00000372276 ZRSR1Q15695 479 aaKnown RBP21■□□□□ 0.95
CD40-201ENST00000372276 APOA5Q6Q788 366 aa21■□□□□ 0.95
CD40-201ENST00000372276 TBC1D10CQ8IV04 446 aa21■□□□□ 0.95
CD40-201ENST00000372276 CEP57L1Q8IYX8 460 aa21■□□□□ 0.95
CD40-201ENST00000372276 TRIM5Q9C035 493 aa21■□□□□ 0.95
CD40-201ENST00000372276 NBPF3Q9H094 633 aa21■□□□□ 0.95
CD40-201ENST00000372276 WWC3Q9ULE0 1092 aa21■□□□□ 0.95
CD40-201ENST00000372276 TIAM2Q8IVF5 1701 aa21■□□□□ 0.95
CD40-201ENST00000372276 NTSR2O95665 410 aa21■□□□□ 0.95
CD40-201ENST00000372276 KIF23Q02241 960 aaPredicted RBP21■□□□□ 0.95
CD40-201ENST00000372276 RASGRF1Q13972 1273 aa21■□□□□ 0.95
CD40-201ENST00000372276 AKNAD1Q5T1N1 836 aa21■□□□□ 0.95
CD40-201ENST00000372276 FMR1NBQ8N0W7 255 aaPredicted RBP21■□□□□ 0.95
CD40-201ENST00000372276 MAGEB6Q8N7X4 407 aa21■□□□□ 0.95
CD40-201ENST00000372276 IGDCC4Q8TDY8 1250 aa21■□□□□ 0.95
CD40-201ENST00000372276 GPHNQ9NQX3 736 aaPredicted RBP21■□□□□ 0.95
CD40-201ENST00000372276 NIP7Q9Y221 180 aaKnown RBP eCLIP21■□□□□ 0.95
CD40-201ENST00000372276 CCDC196A0A1B0GTZ2 297 aa20.99■□□□□ 0.95
CD40-201ENST00000372276 DYNC1I1O14576 645 aa20.99■□□□□ 0.95
CD40-201ENST00000372276 GUCY1B3Q02153 619 aa20.99■□□□□ 0.95
CD40-201ENST00000372276 ANO1Q5XXA6 986 aa20.99■□□□□ 0.95
CD40-201ENST00000372276 NFXL1Q6ZNB6 911 aa20.99■□□□□ 0.95
CD40-201ENST00000372276 MFSD6Q6ZSS7 791 aa20.99■□□□□ 0.95
CD40-201ENST00000372276 KIAA1524Q8TCG1 905 aa20.99■□□□□ 0.95
CD40-201ENST00000372276 STAG1Q8WVM7 1258 aa20.99■□□□□ 0.95
CD40-201ENST00000372276 TIGD1Q96MW7 591 aa20.99■□□□□ 0.95
CD40-201ENST00000372276 MAP7D2Q96T17 732 aa20.99■□□□□ 0.95
CD40-201ENST00000372276 ALG1Q9BT22 464 aa20.99■□□□□ 0.95
CD40-201ENST00000372276 DNAJC25Q9H1X3 360 aa20.99■□□□□ 0.95
CD40-201ENST00000372276 CCDC69A6NI79 296 aa20.98■□□□□ 0.95
CD40-201ENST00000372276 BECN2A8MW95 431 aa20.98■□□□□ 0.95
CD40-201ENST00000372276 AP5Z1O43299 807 aa20.98■□□□□ 0.95
CD40-201ENST00000372276 IGSF3O75054 1194 aa20.98■□□□□ 0.95
CD40-201ENST00000372276 PPP6R2O75170 966 aa20.98■□□□□ 0.95
CD40-201ENST00000372276 CMA1P23946 247 aa20.98■□□□□ 0.95
CD40-201ENST00000372276 IARSP41252 1262 aaKnown RBP20.98■□□□□ 0.95
CD40-201ENST00000372276 FOSBP53539 338 aa20.98■□□□□ 0.95
CD40-201ENST00000372276 IQCB1Q15051 598 aa20.98■□□□□ 0.95
CD40-201ENST00000372276 TMEM67Q5HYA8 995 aa20.98■□□□□ 0.95
CD40-201ENST00000372276 DNTTIP2Q5QJE6 756 aaKnown RBP20.98■□□□□ 0.95
CD40-201ENST00000372276 CYB5R4Q7L1T6 521 aa20.98■□□□□ 0.95
CD40-201ENST00000372276 MTERF4Q7Z6M4 381 aaKnown RBP20.98■□□□□ 0.95
CD40-201ENST00000372276 MRFAP1L1Q96HT8 127 aa20.98■□□□□ 0.95
CD40-201ENST00000372276 BPIFA3Q9BQP9 254 aa20.98■□□□□ 0.95
CD40-201ENST00000372276 SDF4Q9BRK5 362 aa20.98■□□□□ 0.95
CD40-201ENST00000372276 GOLPH3LQ9H4A5 285 aa20.98■□□□□ 0.95
CD40-201ENST00000372276 TTC12Q9H892 705 aaPredicted RBP20.98■□□□□ 0.95
CD40-201ENST00000372276 SLC12A7Q9Y666 1083 aa20.98■□□□□ 0.95
CD40-201ENST00000372276 CHD4Q14839 1912 aa20.97■□□□□ 0.95
CD40-201ENST00000372276 ERICH2A1L162 156 aa20.97■□□□□ 0.95
CD40-201ENST00000372276 MBD4O95243 580 aa20.97■□□□□ 0.95
CD40-201ENST00000372276 RBM6P78332 1123 aaKnown RBP20.97■□□□□ 0.95
CD40-201ENST00000372276 UBE4AQ14139 1066 aa20.97■□□□□ 0.95
CD40-201ENST00000372276 SLC39A14Q15043 492 aa20.97■□□□□ 0.95
CD40-201ENST00000372276 VPS72Q15906 364 aa20.97■□□□□ 0.95
CD40-201ENST00000372276 DRC7Q8IY82 874 aa20.97■□□□□ 0.95
CD40-201ENST00000372276 MARCH10Q8NA82 808 aaPredicted RBP20.97■□□□□ 0.95
CD40-201ENST00000372276 LY9Q9HBG7 655 aa20.97■□□□□ 0.95
CD40-201ENST00000372276 GOLGA8AA7E2F4 631 aa20.96■□□□□ 0.95
CD40-201ENST00000372276 PCP11498 1178 aaKnown RBP20.96■□□□□ 0.95
CD40-201ENST00000372276 SF3B3Q15393 1217 aaKnown RBP20.96■□□□□ 0.95
CD40-201ENST00000372276 HELBQ8NG08 1087 aaPredicted RBP20.96■□□□□ 0.95
CD40-201ENST00000372276 MYO5AQ9Y4I1 1855 aaKnown RBP20.96■□□□□ 0.95
CD40-201ENST00000372276 B4E1Z4 1266 aa20.96■□□□□ 0.95
CD40-201ENST00000372276 IFIT3O14879 490 aaKnown RBP20.96■□□□□ 0.95
CD40-201ENST00000372276 RXRBP28702 533 aa20.96■□□□□ 0.95
CD40-201ENST00000372276 TPM4P67936 248 aa20.96■□□□□ 0.95
CD40-201ENST00000372276 SSRP1Q08945 709 aaKnown RBP20.96■□□□□ 0.95
CD40-201ENST00000372276 GNL2Q13823 731 aaKnown RBP20.96■□□□□ 0.95
CD40-201ENST00000372276 NOL10Q9BSC4 688 aaKnown RBP20.96■□□□□ 0.95
CD40-201ENST00000372276 GSG1L2A8MUP6 293 aa20.95■□□□□ 0.94
CD40-201ENST00000372276 SEMA3EO15041 775 aa20.95■□□□□ 0.94
CD40-201ENST00000372276 ZBTB22O15209 634 aa20.95■□□□□ 0.94
CD40-201ENST00000372276 IFNAR1P17181 557 aa20.95■□□□□ 0.94
CD40-201ENST00000372276 U2AF2P26368 475 aaKnown RBP eCLIP20.95■□□□□ 0.94
CD40-201ENST00000372276 TDO2P48775 406 aa20.95■□□□□ 0.94
CD40-201ENST00000372276 CHRNDQ07001 517 aa20.95■□□□□ 0.94
CD40-201ENST00000372276 CHAF1AQ13111 956 aaPredicted RBP20.95■□□□□ 0.94
CD40-201ENST00000372276 ANKRD18AQ8IVF6 992 aa20.95■□□□□ 0.94
CD40-201ENST00000372276 TRIM22Q8IYM9 498 aa20.95■□□□□ 0.94
CD40-201ENST00000372276 LRP2BPQ9P2M1 347 aa20.95■□□□□ 0.94
CD40-201ENST00000372276 BCORQ6W2J9 1755 aa20.95■□□□□ 0.94
CD40-201ENST00000372276 ZNF804BA4D1E1 1349 aa20.94■□□□□ 0.94
CD40-201ENST00000372276 POLR3DP05423 398 aaPredicted RBP20.94■□□□□ 0.94
CD40-201ENST00000372276 ITPK1Q13572 414 aa20.94■□□□□ 0.94
CD40-201ENST00000372276 SAFBQ15424 915 aaKnown RBP eCLIP20.94■□□□□ 0.94
CD40-201ENST00000372276 KRT40Q6A162 431 aa20.94■□□□□ 0.94
CD40-201ENST00000372276 GJD4Q96KN9 370 aaPredicted RBP20.94■□□□□ 0.94
CD40-201ENST00000372276 FTOQ9C0B1 505 aaKnown RBP eCLIP20.94■□□□□ 0.94
CD40-201ENST00000372276 SEC31BQ9NQW1 1179 aa20.94■□□□□ 0.94
CD40-201ENST00000372276 BSDC1Q9NW68 430 aaPredicted RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms