RNA–Protein interactions for RNA: ENST00000371242.6

RAE1-201, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAE1, Length 2,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-201ENST00000371242 AKNAD1Q5T1N1 836 aa13.02□□□□□ -0.32
RAE1-201ENST00000371242 APOA5Q6Q788 366 aa13.02□□□□□ -0.32
RAE1-201ENST00000371242 CELF1Q92879 486 aaKnown RBP13.02□□□□□ -0.32
RAE1-201ENST00000371242 KRT23Q9C075 422 aa13.02□□□□□ -0.32
RAE1-201ENST00000371242 SLC4A4Q9Y6R1 1079 aa13.02□□□□□ -0.32
RAE1-201ENST00000371242 GNPATO15228 680 aa13.02□□□□□ -0.33
RAE1-201ENST00000371242 ZPR1O75312 459 aa13.02□□□□□ -0.33
RAE1-201ENST00000371242 MSNP26038 577 aaKnown RBP13.02□□□□□ -0.33
RAE1-201ENST00000371242 CEBPZQ03701 1054 aaKnown RBP13.02□□□□□ -0.33
RAE1-201ENST00000371242 CAMK4Q16566 473 aa13.02□□□□□ -0.33
RAE1-201ENST00000371242 SMIM5Q71RC9 77 aa13.02□□□□□ -0.33
RAE1-201ENST00000371242 STAG1Q8WVM7 1258 aa13.02□□□□□ -0.33
RAE1-201ENST00000371242 NLRP3Q96P20 1036 aa13.02□□□□□ -0.33
RAE1-201ENST00000371242 CCDC39Q9UFE4 941 aa13.02□□□□□ -0.33
RAE1-201ENST00000371242 CCNL1Q9UK58 526 aaPredicted RBP13.02□□□□□ -0.33
RAE1-201ENST00000371242 RTCBQ9Y3I0 505 aaKnown RBP13.02□□□□□ -0.33
RAE1-201ENST00000371242 COL1A1P02452 1464 aaPredicted RBP13.02□□□□□ -0.33
RAE1-201ENST00000371242 ECM29Q5VYK3 1845 aa13.01□□□□□ -0.33
RAE1-201ENST00000371242 PRKAB2O43741 272 aa13.01□□□□□ -0.33
RAE1-201ENST00000371242 CDKL5O76039 1030 aa13.01□□□□□ -0.33
RAE1-201ENST00000371242 CTDSPL2Q05D32 466 aa13.01□□□□□ -0.33
RAE1-201ENST00000371242 RAB11FIP4Q86YS3 637 aa13.01□□□□□ -0.33
RAE1-201ENST00000371242 FTOQ9C0B1 505 aaKnown RBP eCLIP13.01□□□□□ -0.33
RAE1-201ENST00000371242 LY9Q9HBG7 655 aa13.01□□□□□ -0.33
RAE1-201ENST00000371242 ZSWIM5Q9P217 1185 aa13.01□□□□□ -0.33
RAE1-201ENST00000371242 SRP68Q9UHB9 627 aaKnown RBP13.01□□□□□ -0.33
RAE1-201ENST00000371242 CYP7A1P22680 504 aa13.01□□□□□ -0.33
RAE1-201ENST00000371242 TDO2P48775 406 aa13.01□□□□□ -0.33
RAE1-201ENST00000371242 RPS8P62241 208 aaKnown RBP13.01□□□□□ -0.33
RAE1-201ENST00000371242 CPLX2Q6PUV4 134 aaKnown RBP13.01□□□□□ -0.33
RAE1-201ENST00000371242 MFSD6Q6ZSS7 791 aa13.01□□□□□ -0.33
RAE1-201ENST00000371242 NBPF5PQ86XG9 351 aaPredicted RBP13.01□□□□□ -0.33
RAE1-201ENST00000371242 FAM84BQ96KN1 310 aaPredicted RBP13.01□□□□□ -0.33
RAE1-201ENST00000371242 MTA3Q9BTC8 594 aa13.01□□□□□ -0.33
RAE1-201ENST00000371242 RTEL1Q9NZ71 1219 aa13.01□□□□□ -0.33
RAE1-201ENST00000371242 ABCF2Q9UG63 623 aa13.01□□□□□ -0.33
RAE1-201ENST00000371242 USP25Q9UHP3 1055 aa13.01□□□□□ -0.33
RAE1-201ENST00000371242 IQSEC3Q9UPP2 1182 aaPredicted RBP13.01□□□□□ -0.33
RAE1-201ENST00000371242 ZBTB43O43298 467 aa13□□□□□ -0.33
RAE1-201ENST00000371242 KDM4AO75164 1064 aa13□□□□□ -0.33
RAE1-201ENST00000371242 TYRO3Q06418 890 aa13□□□□□ -0.33
RAE1-201ENST00000371242 TMEM67Q5HYA8 995 aa13□□□□□ -0.33
RAE1-201ENST00000371242 TPTE2Q6XPS3 522 aa13□□□□□ -0.33
RAE1-201ENST00000371242 BRAPQ7Z569 592 aa13□□□□□ -0.33
RAE1-201ENST00000371242 MIGA1Q8NAN2 632 aa13□□□□□ -0.33
RAE1-201ENST00000371242 INCENPQ9NQS7 918 aa13□□□□□ -0.33
RAE1-201ENST00000371242 TACC3Q9Y6A5 838 aa13□□□□□ -0.33
RAE1-201ENST00000371242 WTIPA6NIX2 430 aaPredicted RBP13□□□□□ -0.33
RAE1-201ENST00000371242 SEMA3EO15041 775 aa13□□□□□ -0.33
RAE1-201ENST00000371242 OTUD7BQ6GQQ9 843 aa13□□□□□ -0.33
RAE1-201ENST00000371242 ADGRA1Q86SQ6 560 aa13□□□□□ -0.33
RAE1-201ENST00000371242 VPS37DQ86XT2 251 aa13□□□□□ -0.33
RAE1-201ENST00000371242 FAM200AQ8TCP9 573 aa13□□□□□ -0.33
RAE1-201ENST00000371242 SENP2Q9HC62 589 aa13□□□□□ -0.33
RAE1-201ENST00000371242 RAI14Q9P0K7 980 aa13□□□□□ -0.33
RAE1-201ENST00000371242 ZKSCAN5Q9Y2L8 839 aa13□□□□□ -0.33
RAE1-201ENST00000371242 MRVI1Q9Y6F6 885 aa13□□□□□ -0.33
RAE1-201ENST00000371242 NID2Q14112 1375 aa12.99□□□□□ -0.33
RAE1-201ENST00000371242 IFIT3O14879 490 aaKnown RBP12.99□□□□□ -0.33
RAE1-201ENST00000371242 CDC27P30260 824 aa12.99□□□□□ -0.33
RAE1-201ENST00000371242 NTRK3Q16288 839 aa12.99□□□□□ -0.33
RAE1-201ENST00000371242 POTEAQ6S8J7 498 aa12.99□□□□□ -0.33
RAE1-201ENST00000371242 FBXO33Q7Z6M2 555 aa12.99□□□□□ -0.33
RAE1-201ENST00000371242 MICU3Q86XE3 530 aa12.99□□□□□ -0.33
RAE1-201ENST00000371242 CKAP2LQ8IYA6 745 aa12.99□□□□□ -0.33
RAE1-201ENST00000371242 ARHGEF1Q92888 912 aaKnown RBP12.99□□□□□ -0.33
RAE1-201ENST00000371242 RNF41Q9H4P4 317 aaPredicted RBP12.99□□□□□ -0.33
RAE1-201ENST00000371242 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.99□□□□□ -0.33
RAE1-201ENST00000371242 PDS5AQ29RF7 1337 aaKnown RBP12.99□□□□□ -0.33
RAE1-201ENST00000371242 MAGEB6P1A0A0J9YX57 407 aa12.99□□□□□ -0.33
RAE1-201ENST00000371242 ADCY5O95622 1261 aa12.99□□□□□ -0.33
RAE1-201ENST00000371242 NFXL1Q6ZNB6 911 aa12.99□□□□□ -0.33
RAE1-201ENST00000371242 CCAR1Q8IX12 1150 aaKnown RBP12.99□□□□□ -0.33
RAE1-201ENST00000371242 RIOK1Q9BRS2 568 aaKnown RBP12.99□□□□□ -0.33
RAE1-201ENST00000371242 ANKRD2Q9GZV1 360 aa12.99□□□□□ -0.33
RAE1-201ENST00000371242 POLR3EQ9NVU0 708 aa12.99□□□□□ -0.33
RAE1-201ENST00000371242 BAZ2AQ9UIF9 1905 aaKnown RBP12.98□□□□□ -0.33
RAE1-201ENST00000371242 CCDC88AQ3V6T2 1871 aa12.98□□□□□ -0.33
RAE1-201ENST00000371242 CTAGE5O15320 804 aa12.98□□□□□ -0.33
RAE1-201ENST00000371242 YEATS4O95619 227 aa12.98□□□□□ -0.33
RAE1-201ENST00000371242 RXRAP19793 462 aa12.98□□□□□ -0.33
RAE1-201ENST00000371242 KIF23Q02241 960 aaPredicted RBP12.98□□□□□ -0.33
RAE1-201ENST00000371242 SART3Q15020 963 aaKnown RBP12.98□□□□□ -0.33
RAE1-201ENST00000371242 MYSM1Q5VVJ2 828 aa12.98□□□□□ -0.33
RAE1-201ENST00000371242 AMIGO3Q86WK7 504 aa12.98□□□□□ -0.33
RAE1-201ENST00000371242 LINC00301Q8NCQ3 95 aa12.98□□□□□ -0.33
RAE1-201ENST00000371242 FAM217BQ9NTX9 383 aaPredicted RBP12.98□□□□□ -0.33
RAE1-201ENST00000371242 ANAPC4Q9UJX5 808 aa12.98□□□□□ -0.33
RAE1-201ENST00000371242 SLC12A7Q9Y666 1083 aa12.98□□□□□ -0.33
RAE1-201ENST00000371242 CCDC69A6NI79 296 aa12.98□□□□□ -0.33
RAE1-201ENST00000371242 GOLGA8AA7E2F4 631 aa12.98□□□□□ -0.33
RAE1-201ENST00000371242 ME1P48163 572 aa12.98□□□□□ -0.33
RAE1-201ENST00000371242 PPARAQ07869 468 aa12.98□□□□□ -0.33
RAE1-201ENST00000371242 SNW1Q13573 536 aaKnown RBP12.98□□□□□ -0.33
RAE1-201ENST00000371242 ZNF772Q68DY9 489 aaPredicted RBP12.98□□□□□ -0.33
RAE1-201ENST00000371242 ADALQ6DHV7 355 aa12.98□□□□□ -0.33
RAE1-201ENST00000371242 CCDC73Q6ZRK6 1079 aa12.98□□□□□ -0.33
RAE1-201ENST00000371242 ALG1Q9BT22 464 aa12.98□□□□□ -0.33
RAE1-201ENST00000371242 GJB4Q9NTQ9 266 aa12.98□□□□□ -0.33
RAE1-201ENST00000371242 STK36Q9NRP7 1315 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms