RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 ZNF341Q9BYN7 854 aa19.99■□□□□ 0.79
VMA21-202ENST00000370361 PA2G4Q9UQ80 394 aaKnown RBP19.99■□□□□ 0.79
VMA21-202ENST00000370361 PHKA1P46020 1223 aa19.98■□□□□ 0.79
VMA21-202ENST00000370361 CCDC102BQ68D86 513 aa19.98■□□□□ 0.79
VMA21-202ENST00000370361 WRNIP1Q96S55 665 aa19.98■□□□□ 0.79
VMA21-202ENST00000370361 CETPP11597 493 aa19.97■□□□□ 0.79
VMA21-202ENST00000370361 PRDX5P30044 214 aa19.97■□□□□ 0.79
VMA21-202ENST00000370361 CACNB3P54284 484 aa19.97■□□□□ 0.79
VMA21-202ENST00000370361 CRHR2Q13324 411 aa19.97■□□□□ 0.79
VMA21-202ENST00000370361 CDAN1Q8IWY9 1227 aa19.97■□□□□ 0.79
VMA21-202ENST00000370361 CCL15-CCL14A0A0B4J2E2 113 aa19.96■□□□□ 0.79
VMA21-202ENST00000370361 PPIL2Q13356 520 aa19.96■□□□□ 0.79
VMA21-202ENST00000370361 SNAPC2Q13487 334 aa19.96■□□□□ 0.79
VMA21-202ENST00000370361 CCL15Q16663 113 aa19.96■□□□□ 0.79
VMA21-202ENST00000370361 ZKSCAN2Q63HK3 967 aa19.96■□□□□ 0.79
VMA21-202ENST00000370361 OTUD5Q96G74 571 aa19.96■□□□□ 0.79
VMA21-202ENST00000370361 FAM163AQ96GL9 167 aaPredicted RBP19.96■□□□□ 0.79
VMA21-202ENST00000370361 PTPN18Q99952 460 aa19.96■□□□□ 0.79
VMA21-202ENST00000370361 R3HDMLQ9H3Y0 253 aa19.96■□□□□ 0.79
VMA21-202ENST00000370361 ZFYVE28Q9HCC9 887 aa19.96■□□□□ 0.79
VMA21-202ENST00000370361 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.96■□□□□ 0.79
VMA21-202ENST00000370361 A0A1B0GUL7 405 aa19.95■□□□□ 0.78
VMA21-202ENST00000370361 MAP4K4O95819 1239 aaPredicted RBP19.95■□□□□ 0.78
VMA21-202ENST00000370361 SP3Q02447 781 aa19.95■□□□□ 0.78
VMA21-202ENST00000370361 PPATQ06203 517 aa19.95■□□□□ 0.78
VMA21-202ENST00000370361 CDC42EP5Q6NZY7 148 aa19.95■□□□□ 0.78
VMA21-202ENST00000370361 DZIP1Q86YF9 867 aaKnown RBP19.95■□□□□ 0.78
VMA21-202ENST00000370361 FRAT1Q92837 279 aaPredicted RBP19.95■□□□□ 0.78
VMA21-202ENST00000370361 SNCAIPQ9Y6H5 919 aa19.95■□□□□ 0.78
VMA21-202ENST00000370361 GAKO14976 1311 aa19.95■□□□□ 0.78
VMA21-202ENST00000370361 ENTPD3O75355 529 aa19.94■□□□□ 0.78
VMA21-202ENST00000370361 RASGRF1Q13972 1273 aa19.94■□□□□ 0.78
VMA21-202ENST00000370361 DIXDC1Q155Q3 683 aa19.94■□□□□ 0.78
VMA21-202ENST00000370361 OTOP1Q7RTM1 612 aa19.94■□□□□ 0.78
VMA21-202ENST00000370361 BRI3BPQ8WY22 251 aa19.94■□□□□ 0.78
VMA21-202ENST00000370361 XAGE2Q96GT9 111 aa19.94■□□□□ 0.78
VMA21-202ENST00000370361 IDI2Q9BXS1 227 aa19.94■□□□□ 0.78
VMA21-202ENST00000370361 USP40Q9NVE5 1235 aa19.94■□□□□ 0.78
VMA21-202ENST00000370361 ZNF112Q9UJU3 913 aa19.94■□□□□ 0.78
VMA21-202ENST00000370361 TRIM17Q9Y577 477 aa19.94■□□□□ 0.78
VMA21-202ENST00000370361 IGSF3O75054 1194 aa19.93■□□□□ 0.78
VMA21-202ENST00000370361 SOX10P56693 466 aa19.93■□□□□ 0.78
VMA21-202ENST00000370361 G3BP1Q13283 466 aaKnown RBP eCLIP19.93■□□□□ 0.78
VMA21-202ENST00000370361 TAF1CQ15572 869 aaPredicted RBP19.93■□□□□ 0.78
VMA21-202ENST00000370361 NOL9Q5SY16 702 aaKnown RBP19.93■□□□□ 0.78
VMA21-202ENST00000370361 MYH2Q9UKX2 1941 aa19.92■□□□□ 0.78
VMA21-202ENST00000370361 BCAR3O75815 825 aa19.92■□□□□ 0.78
VMA21-202ENST00000370361 ADORA1P30542 326 aa19.92■□□□□ 0.78
VMA21-202ENST00000370361 TIMM10P62072 90 aa19.92■□□□□ 0.78
VMA21-202ENST00000370361 GSTO1P78417 241 aa19.92■□□□□ 0.78
VMA21-202ENST00000370361 TFCP2Q12800 502 aa19.92■□□□□ 0.78
VMA21-202ENST00000370361 GORABQ5T7V8 394 aa19.92■□□□□ 0.78
VMA21-202ENST00000370361 EFCC1Q9HA90 598 aa19.92■□□□□ 0.78
VMA21-202ENST00000370361 HNRNPUQ00839 825 aaKnown RBP eCLIP19.91■□□□□ 0.78
VMA21-202ENST00000370361 ERICH6Q7L0X2 663 aa19.91■□□□□ 0.78
VMA21-202ENST00000370361 GPR108Q9NPR9 543 aa19.91■□□□□ 0.78
VMA21-202ENST00000370361 ABCF2Q9UG63 623 aa19.91■□□□□ 0.78
VMA21-202ENST00000370361 AK9Q5TCS8 1911 aa19.91■□□□□ 0.78
VMA21-202ENST00000370361 IRF6O14896 467 aa19.9■□□□□ 0.78
VMA21-202ENST00000370361 NPM3O75607 178 aaKnown RBP19.9■□□□□ 0.78
VMA21-202ENST00000370361 GNRH1P01148 92 aa19.9■□□□□ 0.78
VMA21-202ENST00000370361 LDHCP07864 332 aa19.9■□□□□ 0.78
VMA21-202ENST00000370361 UQCRFS1P1P0C7P4 283 aa19.9■□□□□ 0.78
VMA21-202ENST00000370361 TCP10Q12799 353 aa19.9■□□□□ 0.78
VMA21-202ENST00000370361 FTSJ3Q8IY81 847 aaKnown RBP19.9■□□□□ 0.78
VMA21-202ENST00000370361 CNKSR2Q8WXI2 1034 aa19.9■□□□□ 0.78
VMA21-202ENST00000370361 ZKSCAN4Q969J2 545 aaPredicted RBP19.9■□□□□ 0.78
VMA21-202ENST00000370361 FAM198AQ9UFP1 575 aa19.9■□□□□ 0.78
VMA21-202ENST00000370361 PTPN22Q9Y2R2 807 aa19.9■□□□□ 0.78
VMA21-202ENST00000370361 MROH7-TTC4A0A0A0MT08 1334 aa19.89■□□□□ 0.77
VMA21-202ENST00000370361 TLR2O60603 784 aa19.89■□□□□ 0.77
VMA21-202ENST00000370361 ARID4AP29374 1257 aaPredicted RBP19.89■□□□□ 0.77
VMA21-202ENST00000370361 NFIAQ12857 509 aa19.89■□□□□ 0.77
VMA21-202ENST00000370361 RFX7Q2KHR2 1363 aa19.89■□□□□ 0.77
VMA21-202ENST00000370361 MIGA2Q7L4E1 593 aa19.89■□□□□ 0.77
VMA21-202ENST00000370361 CD99L2Q8TCZ2 262 aa19.89■□□□□ 0.77
VMA21-202ENST00000370361 DOCK2Q92608 1830 aa19.89■□□□□ 0.77
VMA21-202ENST00000370361 CLUAP1Q96AJ1 413 aa19.89■□□□□ 0.77
VMA21-202ENST00000370361 NEUROD6Q96NK8 337 aa19.89■□□□□ 0.77
VMA21-202ENST00000370361 KCNH4Q9UQ05 1017 aa19.89■□□□□ 0.77
VMA21-202ENST00000370361 KIF22Q14807 665 aa19.88■□□□□ 0.77
VMA21-202ENST00000370361 FAM43AQ8N2R8 423 aa19.88■□□□□ 0.77
VMA21-202ENST00000370361 TMEM57Q8N5G2 664 aa19.88■□□□□ 0.77
VMA21-202ENST00000370361 SPATA5Q8NB90 893 aa19.88■□□□□ 0.77
VMA21-202ENST00000370361 GPR75-ASB3A0A0A6YYF3 556 aa19.87■□□□□ 0.77
VMA21-202ENST00000370361 PNMA6EA0A0J9YXQ4 647 aa19.87■□□□□ 0.77
VMA21-202ENST00000370361 BTBD19C9JJ37 291 aa19.87■□□□□ 0.77
VMA21-202ENST00000370361 CXCL11O14625 94 aa19.87■□□□□ 0.77
VMA21-202ENST00000370361 INPP5BP32019 993 aa19.87■□□□□ 0.77
VMA21-202ENST00000370361 RGS3P49796 1198 aa19.87■□□□□ 0.77
VMA21-202ENST00000370361 MAP3K10Q02779 954 aa19.87■□□□□ 0.77
VMA21-202ENST00000370361 POLA2Q14181 598 aa19.87■□□□□ 0.77
VMA21-202ENST00000370361 ANKRD23Q86SG2 305 aa19.87■□□□□ 0.77
VMA21-202ENST00000370361 SSH3Q8TE77 659 aa19.87■□□□□ 0.77
VMA21-202ENST00000370361 ARMC5Q96C12 935 aa19.87■□□□□ 0.77
VMA21-202ENST00000370361 COL2A1P02458 1487 aaPredicted RBP19.86■□□□□ 0.77
VMA21-202ENST00000370361 PDE4DIPQ5VU43 2346 aa19.86■□□□□ 0.77
VMA21-202ENST00000370361 ATRNL1Q5VV63 1379 aa19.86■□□□□ 0.77
VMA21-202ENST00000370361 ZBED9Q6R2W3 1325 aa19.86■□□□□ 0.77
VMA21-202ENST00000370361 PRMT2P55345 433 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms