RNA–Protein interactions for RNA: ENST00000368361.8

CLK2-203, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLK2, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-203ENST00000368361 MAGEB6P1A0A0J9YX57 407 aa29.18■■■□□ 2.26
CLK2-203ENST00000368361 SEMA3EO15041 775 aa29.18■■■□□ 2.26
CLK2-203ENST00000368361 HIBADHP31937 336 aaKnown RBP29.18■■■□□ 2.26
CLK2-203ENST00000368361 SDR42E1Q8WUS8 393 aa29.18■■■□□ 2.26
CLK2-203ENST00000368361 ZSWIM5Q9P217 1185 aa29.18■■■□□ 2.26
CLK2-203ENST00000368361 CPLX1O14810 134 aa29.18■■■□□ 2.26
CLK2-203ENST00000368361 KDM4AO75164 1064 aa29.18■■■□□ 2.26
CLK2-203ENST00000368361 ZNF384Q8TF68 577 aa29.18■■■□□ 2.26
CLK2-203ENST00000368361 TRIM37O94972 964 aa29.17■■■□□ 2.26
CLK2-203ENST00000368361 MFSD6Q6ZSS7 791 aa29.17■■■□□ 2.26
CLK2-203ENST00000368361 KRT27Q7Z3Y8 459 aa29.17■■■□□ 2.26
CLK2-203ENST00000368361 SLC51AQ86UW1 340 aa29.17■■■□□ 2.26
CLK2-203ENST00000368361 RIOK1Q9BRS2 568 aaKnown RBP29.17■■■□□ 2.26
CLK2-203ENST00000368361 CNNM2Q9H8M5 875 aa29.17■■■□□ 2.26
CLK2-203ENST00000368361 TXNRD3Q86VQ6 643 aa29.16■■■□□ 2.26
CLK2-203ENST00000368361 STAG1Q8WVM7 1258 aa29.16■■■□□ 2.26
CLK2-203ENST00000368361 ANP32BQ92688 251 aaKnown RBP29.16■■■□□ 2.26
CLK2-203ENST00000368361 LY9Q9HBG7 655 aa29.16■■■□□ 2.26
CLK2-203ENST00000368361 APOA5Q6Q788 366 aa29.16■■■□□ 2.26
CLK2-203ENST00000368361 LETM1O95202 739 aaPredicted RBP29.15■■■□□ 2.26
CLK2-203ENST00000368361 GYS1P13807 737 aa29.15■■■□□ 2.26
CLK2-203ENST00000368361 RXRAP19793 462 aa29.15■■■□□ 2.26
CLK2-203ENST00000368361 ADD1P35611 737 aaKnown RBP29.15■■■□□ 2.26
CLK2-203ENST00000368361 PRR5LQ6MZQ0 368 aa29.15■■■□□ 2.26
CLK2-203ENST00000368361 RNF214Q8ND24 703 aa29.15■■■□□ 2.26
CLK2-203ENST00000368361 ORC3Q9UBD5 711 aaPredicted RBP29.15■■■□□ 2.26
CLK2-203ENST00000368361 METAP2P50579 478 aaKnown RBP eCLIP29.15■■■□□ 2.26
CLK2-203ENST00000368361 CCDC173Q0VFZ6 552 aa29.15■■■□□ 2.26
CLK2-203ENST00000368361 GRAPQ13588 217 aa29.15■■■□□ 2.26
CLK2-203ENST00000368361 TMEM67Q5HYA8 995 aa29.15■■■□□ 2.26
CLK2-203ENST00000368361 SLC27A3Q5K4L6 730 aa29.15■■■□□ 2.26
CLK2-203ENST00000368361 GRAPLQ8TC17 118 aaPredicted RBP29.15■■■□□ 2.26
CLK2-203ENST00000368361 KRT23Q9C075 422 aa29.15■■■□□ 2.26
CLK2-203ENST00000368361 STK11IPQ8N1F8 1099 aa29.14■■■□□ 2.26
CLK2-203ENST00000368361 CFAP45Q9UL16 551 aa29.14■■■□□ 2.26
CLK2-203ENST00000368361 PDS5AQ29RF7 1337 aaKnown RBP29.14■■■□□ 2.25
CLK2-203ENST00000368361 IRS2Q9Y4H2 1338 aa29.14■■■□□ 2.25
CLK2-203ENST00000368361 DYNLL1P63167 89 aaKnown RBP29.13■■■□□ 2.25
CLK2-203ENST00000368361 RRP12Q5JTH9 1297 aaKnown RBP29.13■■■□□ 2.25
CLK2-203ENST00000368361 LIG1P18858 919 aa29.13■■■□□ 2.25
CLK2-203ENST00000368361 PPARAQ07869 468 aa29.13■■■□□ 2.25
CLK2-203ENST00000368361 SGMS1Q86VZ5 419 aa29.13■■■□□ 2.25
CLK2-203ENST00000368361 MICU3Q86XE3 530 aa29.13■■■□□ 2.25
CLK2-203ENST00000368361 NSUN4Q96CB9 384 aaKnown RBP29.13■■■□□ 2.25
CLK2-203ENST00000368361 PPP1R9BQ96SB3 815 aa29.13■■■□□ 2.25
CLK2-203ENST00000368361 TOMM22Q9NS69 142 aa29.13■■■□□ 2.25
CLK2-203ENST00000368361 GOLGA6L4A6NEF3 574 aa29.12■■■□□ 2.25
CLK2-203ENST00000368361 IFIT3O14879 490 aaKnown RBP29.12■■■□□ 2.25
CLK2-203ENST00000368361 OTUD7BQ6GQQ9 843 aa29.12■■■□□ 2.25
CLK2-203ENST00000368361 NFXL1Q6ZNB6 911 aa29.12■■■□□ 2.25
CLK2-203ENST00000368361 PGBD1Q96JS3 809 aa29.12■■■□□ 2.25
CLK2-203ENST00000368361 LIFRP42702 1097 aa29.12■■■□□ 2.25
CLK2-203ENST00000368361 CEBPZQ03701 1054 aaKnown RBP29.12■■■□□ 2.25
CLK2-203ENST00000368361 CHAF1AQ13111 956 aaPredicted RBP29.12■■■□□ 2.25
CLK2-203ENST00000368361 AEBP2Q6ZN18 517 aaPredicted RBP29.12■■■□□ 2.25
CLK2-203ENST00000368361 ILDR1Q86SU0 546 aaPredicted RBP29.12■■■□□ 2.25
CLK2-203ENST00000368361 C8orf76Q96K31 380 aa29.12■■■□□ 2.25
CLK2-203ENST00000368361 ANKIB1Q9P2G1 1089 aa29.12■■■□□ 2.25
CLK2-203ENST00000368361 CDC27P30260 824 aa29.11■■■□□ 2.25
CLK2-203ENST00000368361 MECOMQ03112 1051 aa29.11■■■□□ 2.25
CLK2-203ENST00000368361 GIMAP6Q6P9H5 292 aa29.11■■■□□ 2.25
CLK2-203ENST00000368361 FTOQ9C0B1 505 aaKnown RBP eCLIP29.11■■■□□ 2.25
CLK2-203ENST00000368361 ZBTB43O43298 467 aa29.11■■■□□ 2.25
CLK2-203ENST00000368361 CCDC144CPQ8IYA2 1237 aa29.11■■■□□ 2.25
CLK2-203ENST00000368361 MYL10Q9BUA6 226 aa29.11■■■□□ 2.25
CLK2-203ENST00000368361 MINDY4BA8MYZ0 360 aa29.1■■■□□ 2.25
CLK2-203ENST00000368361 PRDX5P30044 214 aa29.1■■■□□ 2.25
CLK2-203ENST00000368361 FBXO18Q8NFZ0 1043 aa29.09■■■□□ 2.25
CLK2-203ENST00000368361 ZKSCAN3Q9BRR0 538 aa29.09■■■□□ 2.25
CLK2-203ENST00000368361 GJB4Q9NTQ9 266 aa29.09■■■□□ 2.25
CLK2-203ENST00000368361 JAG2Q9Y219 1238 aa29.09■■■□□ 2.25
CLK2-203ENST00000368361 SMIM22K7EJ46 135 aa29.09■■■□□ 2.25
CLK2-203ENST00000368361 FAM43AQ8N2R8 423 aa29.09■■■□□ 2.25
CLK2-203ENST00000368361 RNF41Q9H4P4 317 aaPredicted RBP29.09■■■□□ 2.25
CLK2-203ENST00000368361 BAZ2AQ9UIF9 1905 aaKnown RBP29.09■■■□□ 2.25
CLK2-203ENST00000368361 SERPINB2P05120 415 aa29.08■■■□□ 2.25
CLK2-203ENST00000368361 USP28Q96RU2 1077 aa29.08■■■□□ 2.25
CLK2-203ENST00000368361 RPGRQ92834 1020 aaKnown RBP29.08■■■□□ 2.25
CLK2-203ENST00000368361 ANAPC4Q9UJX5 808 aa29.08■■■□□ 2.25
CLK2-203ENST00000368361 SLC12A7Q9Y666 1083 aa29.08■■■□□ 2.25
CLK2-203ENST00000368361 CCDC69A6NI79 296 aa29.07■■■□□ 2.24
CLK2-203ENST00000368361 GOLGA8AA7E2F4 631 aa29.06■■■□□ 2.24
CLK2-203ENST00000368361 ST5P78524 1137 aa29.06■■■□□ 2.24
CLK2-203ENST00000368361 TRIM44Q96DX7 344 aaPredicted RBP29.06■■■□□ 2.24
CLK2-203ENST00000368361 FUCA2Q9BTY2 467 aa29.06■■■□□ 2.24
CLK2-203ENST00000368361 BRIP1Q9BX63 1249 aa29.06■■■□□ 2.24
CLK2-203ENST00000368361 FAM217BQ9NTX9 383 aaPredicted RBP29.06■■■□□ 2.24
CLK2-203ENST00000368361 DACT1Q9NYF0 836 aa29.06■■■□□ 2.24
CLK2-203ENST00000368361 LEMD3Q9Y2U8 911 aa29.06■■■□□ 2.24
CLK2-203ENST00000368361 CDKL5O76039 1030 aa29.06■■■□□ 2.24
CLK2-203ENST00000368361 CRY2Q49AN0 593 aa29.06■■■□□ 2.24
CLK2-203ENST00000368361 PROM2Q8N271 834 aa29.06■■■□□ 2.24
CLK2-203ENST00000368361 BICD2Q8TD16 824 aa29.06■■■□□ 2.24
CLK2-203ENST00000368361 PHKBQ93100 1093 aa29.06■■■□□ 2.24
CLK2-203ENST00000368361 ZNF396Q96N95 335 aaPredicted RBP29.06■■■□□ 2.24
CLK2-203ENST00000368361 RCOR1Q9UKL0 485 aa29.06■■■□□ 2.24
CLK2-203ENST00000368361 SART3Q15020 963 aaKnown RBP29.05■■■□□ 2.24
CLK2-203ENST00000368361 NTRK3Q16288 839 aa29.05■■■□□ 2.24
CLK2-203ENST00000368361 ATL3Q6DD88 541 aa29.05■■■□□ 2.24
CLK2-203ENST00000368361 AATFQ9NY61 560 aaKnown RBP eCLIP29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms