RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 ASIC1P78348 528 aa13.29□□□□□ -0.28
COPA-202ENST00000368069 CTDSPL2Q05D32 466 aa13.29□□□□□ -0.28
COPA-202ENST00000368069 LRMPQ12912 555 aa13.29□□□□□ -0.28
COPA-202ENST00000368069 SETDB2Q96T68 719 aa13.29□□□□□ -0.28
COPA-202ENST00000368069 MCM9Q9NXL9 1143 aa13.29□□□□□ -0.28
COPA-202ENST00000368069 ZNF532Q9HCE3 1301 aa13.29□□□□□ -0.28
COPA-202ENST00000368069 A2ML1A8K2U0 1454 aa13.29□□□□□ -0.28
COPA-202ENST00000368069 CTAGE9A4FU28 777 aa13.28□□□□□ -0.28
COPA-202ENST00000368069 MCM6Q14566 821 aa13.28□□□□□ -0.28
COPA-202ENST00000368069 LRRC24Q50LG9 513 aa13.28□□□□□ -0.28
COPA-202ENST00000368069 VPS36Q86VN1 386 aa13.28□□□□□ -0.28
COPA-202ENST00000368069 SMARCC1Q92922 1105 aaPredicted RBP13.28□□□□□ -0.28
COPA-202ENST00000368069 NGLY1Q96IV0 654 aa13.28□□□□□ -0.28
COPA-202ENST00000368069 FEZ1Q99689 392 aa13.28□□□□□ -0.28
COPA-202ENST00000368069 OGFRQ9NZT2 677 aa13.28□□□□□ -0.28
COPA-202ENST00000368069 SH3TC1Q8TE82 1336 aa13.28□□□□□ -0.28
COPA-202ENST00000368069 NAPAP54920 295 aa13.28□□□□□ -0.28
COPA-202ENST00000368069 IQUBQ8NA54 791 aa13.28□□□□□ -0.28
COPA-202ENST00000368069 KIF2CQ99661 725 aa13.28□□□□□ -0.28
COPA-202ENST00000368069 POLR2DO15514 142 aaKnown RBP13.28□□□□□ -0.28
COPA-202ENST00000368069 RDXP35241 583 aaKnown RBP13.28□□□□□ -0.28
COPA-202ENST00000368069 SCRN1Q12765 414 aa13.28□□□□□ -0.28
COPA-202ENST00000368069 U2AF2P26368 475 aaKnown RBP eCLIP13.28□□□□□ -0.286e-7■■□□□ 13.6
COPA-202ENST00000368069 HSPA2P54652 639 aa13.28□□□□□ -0.28
COPA-202ENST00000368069 ADALQ6DHV7 355 aa13.28□□□□□ -0.28
COPA-202ENST00000368069 ARHGEF25Q86VW2 580 aa13.27□□□□□ -0.28
COPA-202ENST00000368069 CEP112Q8N8E3 955 aa13.27□□□□□ -0.28
COPA-202ENST00000368069 IMPACTQ9P2X3 320 aa13.27□□□□□ -0.28
COPA-202ENST00000368069 JAG2Q9Y219 1238 aa13.27□□□□□ -0.28
COPA-202ENST00000368069 TCIRG1Q13488 830 aa13.27□□□□□ -0.28
COPA-202ENST00000368069 ZNF569Q5MCW4 686 aa13.27□□□□□ -0.28
COPA-202ENST00000368069 CTR9Q6PD62 1173 aa13.27□□□□□ -0.28
COPA-202ENST00000368069 BTG4Q9NY30 223 aa13.27□□□□□ -0.28
COPA-202ENST00000368069 PUF60Q9UHX1 559 aaKnown RBP13.27□□□□□ -0.28
COPA-202ENST00000368069 AKR1B15C9JRZ8 316 aaPredicted RBP13.27□□□□□ -0.29
COPA-202ENST00000368069 CYP21A2P08686 494 aa13.27□□□□□ -0.29
COPA-202ENST00000368069 UBXN1Q04323 297 aa13.27□□□□□ -0.29
COPA-202ENST00000368069 TCERG1LQ5VWI1 586 aa13.27□□□□□ -0.29
COPA-202ENST00000368069 LPIN2Q92539 896 aa13.27□□□□□ -0.29
COPA-202ENST00000368069 BCL2L12Q9HB09 334 aa13.27□□□□□ -0.29
COPA-202ENST00000368069 RBM28Q9NW13 759 aaKnown RBP13.27□□□□□ -0.29
COPA-202ENST00000368069 TMOD2Q9NZR1 351 aa13.27□□□□□ -0.29
COPA-202ENST00000368069 MRVI1Q9Y6F6 885 aa13.27□□□□□ -0.29
COPA-202ENST00000368069 PPRC1Q5VV67 1664 aaKnown RBP13.27□□□□□ -0.29
COPA-202ENST00000368069 SHTN1A0MZ66 631 aa13.27□□□□□ -0.29
COPA-202ENST00000368069 RFC4P35249 363 aa13.27□□□□□ -0.29
COPA-202ENST00000368069 XPO4Q9C0E2 1151 aaKnown RBP13.27□□□□□ -0.29
COPA-202ENST00000368069 IQSEC2Q5JU85 1478 aa13.26□□□□□ -0.29
COPA-202ENST00000368069 PRDM1O75626 825 aa13.26□□□□□ -0.29
COPA-202ENST00000368069 PLIN2Q99541 437 aa13.26□□□□□ -0.29
COPA-202ENST00000368069 GTPBP4Q9BZE4 634 aaKnown RBP13.26□□□□□ -0.29
COPA-202ENST00000368069 KCNJ14Q9UNX9 436 aa13.26□□□□□ -0.29
COPA-202ENST00000368069 LMTK2Q8IWU2 1503 aa13.26□□□□□ -0.29
COPA-202ENST00000368069 MYO1BO43795 1136 aa13.26□□□□□ -0.29
COPA-202ENST00000368069 CCT6AP40227 531 aaKnown RBP13.26□□□□□ -0.29
COPA-202ENST00000368069 DRC1Q96MC2 740 aa13.26□□□□□ -0.29
COPA-202ENST00000368069 KIAA1468Q9P260 1216 aa13.26□□□□□ -0.29
COPA-202ENST00000368069 PYCARDQ9ULZ3 195 aa13.26□□□□□ -0.29
COPA-202ENST00000368069 CKAP4Q07065 602 aaKnown RBP13.26□□□□□ -0.29
COPA-202ENST00000368069 ELF2Q15723 593 aa13.26□□□□□ -0.29
COPA-202ENST00000368069 TMEM132AQ24JP5 1023 aa13.26□□□□□ -0.29
COPA-202ENST00000368069 V9GY48 417 aaPredicted RBP13.26□□□□□ -0.29
COPA-202ENST00000368069 PFKFB1P16118 471 aa13.25□□□□□ -0.29
COPA-202ENST00000368069 EVCP57679 992 aa13.25□□□□□ -0.29
COPA-202ENST00000368069 TAX1BP1Q86VP1 789 aa13.25□□□□□ -0.29
COPA-202ENST00000368069 LRRC27Q9C0I9 530 aa13.25□□□□□ -0.29
COPA-202ENST00000368069 GUCA1BQ9UMX6 200 aa13.25□□□□□ -0.29
COPA-202ENST00000368069 IGSF22Q8N9C0 903 aa13.25□□□□□ -0.29
COPA-202ENST00000368069 SPATA5Q8NB90 893 aa13.25□□□□□ -0.29
COPA-202ENST00000368069 IQGAP1P46940 1657 aa13.25□□□□□ -0.29
COPA-202ENST00000368069 ERVV-2B6SEH9 535 aa13.25□□□□□ -0.29
COPA-202ENST00000368069 SASH1O94885 1247 aa13.25□□□□□ -0.29
COPA-202ENST00000368069 PDIA3P30101 505 aaKnown RBP13.25□□□□□ -0.29
COPA-202ENST00000368069 DTHD1Q6ZMT9 781 aa13.25□□□□□ -0.29
COPA-202ENST00000368069 CNGA4Q8IV77 575 aa13.25□□□□□ -0.29
COPA-202ENST00000368069 CUL5Q93034 780 aa13.25□□□□□ -0.29
COPA-202ENST00000368069 PCDHA7Q9UN72 937 aa13.25□□□□□ -0.29
COPA-202ENST00000368069 CTNND2Q9UQB3 1225 aa13.25□□□□□ -0.29
COPA-202ENST00000368069 NFE2L3Q9Y4A8 694 aa13.25□□□□□ -0.29
COPA-202ENST00000368069 TSPOAP1O95153 1857 aa13.25□□□□□ -0.29
COPA-202ENST00000368069 MAPK8IP2Q13387 824 aaPredicted RBP13.25□□□□□ -0.29
COPA-202ENST00000368069 FGAP02671 866 aa13.24□□□□□ -0.29
COPA-202ENST00000368069 PNOCQ13519 176 aa13.24□□□□□ -0.29
COPA-202ENST00000368069 HLTFQ14527 1009 aaKnown RBP eCLIP13.24□□□□□ -0.29
COPA-202ENST00000368069 SMAP1Q8IYB5 467 aaPredicted RBP13.24□□□□□ -0.29
COPA-202ENST00000368069 ZBTB9Q96C00 473 aa13.24□□□□□ -0.29
COPA-202ENST00000368069 ERBB4Q15303 1308 aa13.24□□□□□ -0.29
COPA-202ENST00000368069 MLKLQ8NB16 471 aa13.24□□□□□ -0.29
COPA-202ENST00000368069 NAA15Q9BXJ9 866 aaKnown RBP13.24□□□□□ -0.29
COPA-202ENST00000368069 C6orf50Q9HD87 102 aa13.24□□□□□ -0.29
COPA-202ENST00000368069 DENND2AQ9ULE3 1009 aa13.24□□□□□ -0.29
COPA-202ENST00000368069 ADD1P35611 737 aaKnown RBP13.24□□□□□ -0.29
COPA-202ENST00000368069 NOP2P46087 812 aaKnown RBP13.24□□□□□ -0.29
COPA-202ENST00000368069 NECTIN1Q15223 517 aa13.24□□□□□ -0.29
COPA-202ENST00000368069 WWC2Q6AWC2 1192 aa13.24□□□□□ -0.29
COPA-202ENST00000368069 PUS3Q9BZE2 481 aaKnown RBP13.24□□□□□ -0.29
COPA-202ENST00000368069 TMCO5BA8MYB1 307 aa13.24□□□□□ -0.29
COPA-202ENST00000368069 POSTNQ15063 836 aa13.24□□□□□ -0.29
COPA-202ENST00000368069 PARP10Q53GL7 1025 aa13.24□□□□□ -0.29
COPA-202ENST00000368069 MMRN2Q9H8L6 949 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms