RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 NEUROD6Q96NK8 337 aa11.09□□□□□ -0.63
CNIH4-202ENST00000366857 INCENPQ9NQS7 918 aa11.09□□□□□ -0.63
CNIH4-202ENST00000366857 CNNM1Q9NRU3 951 aa11.09□□□□□ -0.63
CNIH4-202ENST00000366857 STK36Q9NRP7 1315 aa11.09□□□□□ -0.63
CNIH4-202ENST00000366857 NLRP3Q96P20 1036 aa11.09□□□□□ -0.63
CNIH4-202ENST00000366857 TCP11L1Q9NUJ3 509 aa11.09□□□□□ -0.63
CNIH4-202ENST00000366857 NUCB2P80303 420 aa11.08□□□□□ -0.64
CNIH4-202ENST00000366857 SLC15A2Q16348 729 aa11.08□□□□□ -0.64
CNIH4-202ENST00000366857 NBPF5PQ86XG9 351 aaPredicted RBP11.08□□□□□ -0.64
CNIH4-202ENST00000366857 ZSCAN22P10073 491 aaPredicted RBP11.08□□□□□ -0.64
CNIH4-202ENST00000366857 IGHMBP2P38935 993 aaKnown RBP11.08□□□□□ -0.64
CNIH4-202ENST00000366857 ZPR1O75312 459 aa11.08□□□□□ -0.64
CNIH4-202ENST00000366857 NT5C2P49902 561 aa11.08□□□□□ -0.64
CNIH4-202ENST00000366857 CCDC9Q9Y3X0 531 aaKnown RBP11.08□□□□□ -0.64
CNIH4-202ENST00000366857 CDC27P30260 824 aa11.07□□□□□ -0.64
CNIH4-202ENST00000366857 RFC4P35249 363 aa11.07□□□□□ -0.64
CNIH4-202ENST00000366857 IL17RBQ9NRM6 502 aa11.07□□□□□ -0.64
CNIH4-202ENST00000366857 ZSWIM5Q9P217 1185 aa11.07□□□□□ -0.64
CNIH4-202ENST00000366857 SIP14410 1827 aa11.07□□□□□ -0.64
CNIH4-202ENST00000366857 F13A1P00488 732 aa11.07□□□□□ -0.64
CNIH4-202ENST00000366857 MCCP23508 829 aa11.07□□□□□ -0.64
CNIH4-202ENST00000366857 PSMA5P28066 241 aa11.07□□□□□ -0.64
CNIH4-202ENST00000366857 PRDX5P30044 214 aa11.07□□□□□ -0.64
CNIH4-202ENST00000366857 EZH2Q15910 746 aaKnown RBP11.07□□□□□ -0.64
CNIH4-202ENST00000366857 MAGEB6Q8N7X4 407 aa11.07□□□□□ -0.64
CNIH4-202ENST00000366857 CNBD1Q8NA66 436 aa11.07□□□□□ -0.64
CNIH4-202ENST00000366857 GNAT2P19087 354 aa11.06□□□□□ -0.64
CNIH4-202ENST00000366857 ANKRD1Q15327 319 aa11.06□□□□□ -0.64
CNIH4-202ENST00000366857 PKN1Q16512 942 aa11.06□□□□□ -0.64
CNIH4-202ENST00000366857 GMLQ99445 158 aa11.06□□□□□ -0.64
CNIH4-202ENST00000366857 MAP3K14Q99558 947 aa11.06□□□□□ -0.64
CNIH4-202ENST00000366857 DCP1AQ9NPI6 582 aaPredicted RBP11.06□□□□□ -0.64
CNIH4-202ENST00000366857 MEX3CQ5U5Q3 659 aaKnown RBP11.06□□□□□ -0.64
CNIH4-202ENST00000366857 ZSCAN25Q6NSZ9 544 aa11.06□□□□□ -0.64
CNIH4-202ENST00000366857 CDC37L1Q7L3B6 337 aa11.06□□□□□ -0.64
CNIH4-202ENST00000366857 CD209Q9NNX6 404 aa11.06□□□□□ -0.64
CNIH4-202ENST00000366857 EDIL3O43854 480 aa11.06□□□□□ -0.64
CNIH4-202ENST00000366857 NPM3O75607 178 aaKnown RBP11.06□□□□□ -0.64
CNIH4-202ENST00000366857 PCP11498 1178 aaKnown RBP11.06□□□□□ -0.64
CNIH4-202ENST00000366857 GJB2P29033 226 aa11.06□□□□□ -0.64
CNIH4-202ENST00000366857 FKBP4Q02790 459 aaKnown RBP eCLIP11.06□□□□□ -0.64
CNIH4-202ENST00000366857 SUGT1Q9Y2Z0 365 aa11.06□□□□□ -0.64
CNIH4-202ENST00000366857 JAK2O60674 1132 aa11.05□□□□□ -0.64
CNIH4-202ENST00000366857 PRELPP51888 382 aa11.05□□□□□ -0.64
CNIH4-202ENST00000366857 ILDR2Q71H61 639 aa11.05□□□□□ -0.64
CNIH4-202ENST00000366857 FLAD1Q8NFF5 587 aa11.05□□□□□ -0.64
CNIH4-202ENST00000366857 MROH7-TTC4A0A0A0MT08 1334 aa11.05□□□□□ -0.64
CNIH4-202ENST00000366857 STX6O43752 255 aa11.05□□□□□ -0.64
CNIH4-202ENST00000366857 SMCHD1A6NHR9 2005 aa11.05□□□□□ -0.64
CNIH4-202ENST00000366857 PDIA4P13667 645 aaKnown RBP11.05□□□□□ -0.64
CNIH4-202ENST00000366857 TROAPQ12815 778 aa11.05□□□□□ -0.64
CNIH4-202ENST00000366857 NAA16Q6N069 864 aaPredicted RBP11.05□□□□□ -0.64
CNIH4-202ENST00000366857 BLOC1S2Q6QNY1 142 aa11.05□□□□□ -0.64
CNIH4-202ENST00000366857 LARP6Q9BRS8 491 aaKnown RBP11.05□□□□□ -0.64
CNIH4-202ENST00000366857 TMEM63CQ9P1W3 806 aa11.05□□□□□ -0.64
CNIH4-202ENST00000366857 CHMP3Q9Y3E7 222 aa11.05□□□□□ -0.64
CNIH4-202ENST00000366857 U2AF2P26368 475 aaKnown RBP eCLIP11.04□□□□□ -0.64
CNIH4-202ENST00000366857 MAP3K10Q02779 954 aa11.04□□□□□ -0.64
CNIH4-202ENST00000366857 NLGN1Q8N2Q7 840 aa11.04□□□□□ -0.64
CNIH4-202ENST00000366857 NECAB1Q8N987 351 aa11.04□□□□□ -0.64
CNIH4-202ENST00000366857 ARMT1Q9H993 441 aa11.04□□□□□ -0.64
CNIH4-202ENST00000366857 NPR1P16066 1061 aa11.04□□□□□ -0.64
CNIH4-202ENST00000366857 ATP2B4P23634 1241 aa11.04□□□□□ -0.64
CNIH4-202ENST00000366857 DYNLL1P63167 89 aaKnown RBP11.04□□□□□ -0.64
CNIH4-202ENST00000366857 CCDC24Q8N4L8 307 aa11.04□□□□□ -0.64
CNIH4-202ENST00000366857 ENGASEQ8NFI3 743 aa11.04□□□□□ -0.64
CNIH4-202ENST00000366857 MPHOSPH8Q99549 860 aa11.04□□□□□ -0.64
CNIH4-202ENST00000366857 ARID2Q68CP9 1835 aa11.04□□□□□ -0.64
CNIH4-202ENST00000366857 MBD4O95243 580 aa11.04□□□□□ -0.64
CNIH4-202ENST00000366857 HMGB2P26583 209 aaKnown RBP11.04□□□□□ -0.64
CNIH4-202ENST00000366857 SNW1Q13573 536 aaKnown RBP11.04□□□□□ -0.64
CNIH4-202ENST00000366857 C12orf60Q5U649 245 aa11.04□□□□□ -0.64
CNIH4-202ENST00000366857 OLFM4Q6UX06 510 aa11.04□□□□□ -0.64
CNIH4-202ENST00000366857 TCEANC2Q96MN5 208 aa11.04□□□□□ -0.64
CNIH4-202ENST00000366857 ADAMTS3O15072 1205 aa11.03□□□□□ -0.64
CNIH4-202ENST00000366857 GADD45BO75293 160 aaPredicted RBP11.03□□□□□ -0.64
CNIH4-202ENST00000366857 HIBADHP31937 336 aaKnown RBP11.03□□□□□ -0.64
CNIH4-202ENST00000366857 AKNAD1Q5T1N1 836 aa11.03□□□□□ -0.64
CNIH4-202ENST00000366857 CCDC125Q86Z20 511 aa11.03□□□□□ -0.64
CNIH4-202ENST00000366857 RNF20Q5VTR2 975 aa11.03□□□□□ -0.64
CNIH4-202ENST00000366857 APOA5Q6Q788 366 aa11.03□□□□□ -0.64
CNIH4-202ENST00000366857 RBM17Q96I25 401 aaKnown RBP11.03□□□□□ -0.64
CNIH4-202ENST00000366857 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.03□□□□□ -0.64
CNIH4-202ENST00000366857 YDJCA8MPS7 323 aa11.03□□□□□ -0.64
CNIH4-202ENST00000366857 TRAK2O60296 914 aa11.03□□□□□ -0.64
CNIH4-202ENST00000366857 SNHG28P0DPA3 235 aa11.03□□□□□ -0.64
CNIH4-202ENST00000366857 APOBRQ0VD83 1088 aa11.03□□□□□ -0.64
CNIH4-202ENST00000366857 GSE1Q14687 1217 aa11.03□□□□□ -0.64
CNIH4-202ENST00000366857 PGBD1Q96JS3 809 aa11.03□□□□□ -0.64
CNIH4-202ENST00000366857 MYO3BQ8WXR4 1341 aa11.03□□□□□ -0.64
CNIH4-202ENST00000366857 KIF28PB7ZC32 967 aa11.02□□□□□ -0.64
CNIH4-202ENST00000366857 PTGER2P43116 358 aa11.02□□□□□ -0.64
CNIH4-202ENST00000366857 UBE2Q2LH0YL09 131 aa11.02□□□□□ -0.65
CNIH4-202ENST00000366857 PHF14O94880 888 aa11.02□□□□□ -0.65
CNIH4-202ENST00000366857 PPARAQ07869 468 aa11.02□□□□□ -0.65
CNIH4-202ENST00000366857 PTPAQ15257 358 aa11.02□□□□□ -0.65
CNIH4-202ENST00000366857 CCDC83Q8IWF9 413 aa11.02□□□□□ -0.65
CNIH4-202ENST00000366857 TMEM87BQ96K49 555 aa11.02□□□□□ -0.65
CNIH4-202ENST00000366857 LOXHD1Q8IVV2 1947 aa11.02□□□□□ -0.65
CNIH4-202ENST00000366857 DDX11L8A8MPP1 907 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms