RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.01□□□□□ -1.61
RNU6-1249P-201ENST00000363237 A0A1W2PQH9 124 aa5□□□□□ -1.61
RNU6-1249P-201ENST00000363237 METTL12A8MUP2 240 aa5□□□□□ -1.61
RNU6-1249P-201ENST00000363237 PDE2AO00408 941 aaPredicted RBP5□□□□□ -1.61
RNU6-1249P-201ENST00000363237 ACPPP15309 386 aa5□□□□□ -1.61
RNU6-1249P-201ENST00000363237 RHOQP17081 205 aa5□□□□□ -1.61
RNU6-1249P-201ENST00000363237 SOX5P35711 763 aa5□□□□□ -1.61
RNU6-1249P-201ENST00000363237 STAT3P40763 770 aa5□□□□□ -1.61
RNU6-1249P-201ENST00000363237 RPL6Q02878 288 aaKnown RBP5□□□□□ -1.61
RNU6-1249P-201ENST00000363237 SFSWAPQ12872 951 aaKnown RBP5□□□□□ -1.61
RNU6-1249P-201ENST00000363237 BRDTQ58F21 947 aaPredicted RBP5□□□□□ -1.61
RNU6-1249P-201ENST00000363237 COL13A1Q5TAT6 717 aaPredicted RBP5□□□□□ -1.61
RNU6-1249P-201ENST00000363237 LLGL2Q6P1M3 1020 aa5□□□□□ -1.61
RNU6-1249P-201ENST00000363237 EEPD1Q7L9B9 569 aa5□□□□□ -1.61
RNU6-1249P-201ENST00000363237 NIM1KQ8IY84 436 aa5□□□□□ -1.61
RNU6-1249P-201ENST00000363237 ASAP3Q8TDY4 903 aa5□□□□□ -1.61
RNU6-1249P-201ENST00000363237 CLEC4MQ9H2X3 399 aaPredicted RBP5□□□□□ -1.61
RNU6-1249P-201ENST00000363237 CAAP1Q9H8G2 361 aa5□□□□□ -1.61
RNU6-1249P-201ENST00000363237 MCM8Q9UJA3 840 aa5□□□□□ -1.61
RNU6-1249P-201ENST00000363237 PCDHB14Q9Y5E9 798 aa5□□□□□ -1.61
RNU6-1249P-201ENST00000363237 EID1Q9Y6B2 187 aa5□□□□□ -1.61
RNU6-1249P-201ENST00000363237 ATXN7O15265 892 aaPredicted RBP4.99□□□□□ -1.61
RNU6-1249P-201ENST00000363237 EFSO43281 561 aa4.99□□□□□ -1.61
RNU6-1249P-201ENST00000363237 RFPL3O75679 317 aa4.99□□□□□ -1.61
RNU6-1249P-201ENST00000363237 TRPA1O75762 1119 aa4.99□□□□□ -1.61
RNU6-1249P-201ENST00000363237 BMP2P12643 396 aa4.99□□□□□ -1.61
RNU6-1249P-201ENST00000363237 NFKB1P19838 968 aa4.99□□□□□ -1.61
RNU6-1249P-201ENST00000363237 GUCY2CP25092 1073 aa4.99□□□□□ -1.61
RNU6-1249P-201ENST00000363237 NRLP54845 237 aa4.99□□□□□ -1.61
RNU6-1249P-201ENST00000363237 NCAPHQ15003 741 aa4.99□□□□□ -1.61
RNU6-1249P-201ENST00000363237 PERM1Q5SV97 790 aa4.99□□□□□ -1.61
RNU6-1249P-201ENST00000363237 HGSNATQ68CP4 663 aa4.99□□□□□ -1.61
RNU6-1249P-201ENST00000363237 CCSAPQ6IQ19 270 aaPredicted RBP4.99□□□□□ -1.61
RNU6-1249P-201ENST00000363237 KANK3Q6NY19 840 aa4.99□□□□□ -1.61
RNU6-1249P-201ENST00000363237 C6orf15Q6UXA7 325 aaPredicted RBP4.99□□□□□ -1.61
RNU6-1249P-201ENST00000363237 DHX32Q7L7V1 743 aaKnown RBP4.99□□□□□ -1.61
RNU6-1249P-201ENST00000363237 TTC6Q86TZ1 520 aa4.99□□□□□ -1.61
RNU6-1249P-201ENST00000363237 THNSL2Q86YJ6 484 aa4.99□□□□□ -1.61
RNU6-1249P-201ENST00000363237 JAMLQ86YT9 394 aa4.99□□□□□ -1.61
RNU6-1249P-201ENST00000363237 TAB3Q8N5C8 712 aaPredicted RBP4.99□□□□□ -1.61
RNU6-1249P-201ENST00000363237 ZSCAN1Q8NBB4 408 aa4.99□□□□□ -1.61
RNU6-1249P-201ENST00000363237 ZNF526Q8TF50 670 aaPredicted RBP4.99□□□□□ -1.61
RNU6-1249P-201ENST00000363237 PMM1Q92871 262 aa4.99□□□□□ -1.61
RNU6-1249P-201ENST00000363237 SPATA9Q9BWV2 254 aa4.99□□□□□ -1.61
RNU6-1249P-201ENST00000363237 EPN3Q9H201 632 aa4.99□□□□□ -1.61
RNU6-1249P-201ENST00000363237 GPAMQ9HCL2 828 aa4.99□□□□□ -1.61
RNU6-1249P-201ENST00000363237 PCDHGC4Q9Y5F7 938 aa4.99□□□□□ -1.61
RNU6-1249P-201ENST00000363237 LOC102724428A0A0B4J2F2 783 aa4.98□□□□□ -1.61
RNU6-1249P-201ENST00000363237 IQCA1LA6NCM1 817 aa4.98□□□□□ -1.61
RNU6-1249P-201ENST00000363237 MEIS3P2A8K0S8 358 aa4.98□□□□□ -1.61
RNU6-1249P-201ENST00000363237 KIF3BO15066 747 aa4.98□□□□□ -1.61
RNU6-1249P-201ENST00000363237 CAPN5O15484 640 aaPredicted RBP4.98□□□□□ -1.61
RNU6-1249P-201ENST00000363237 MYCLP1P12525 358 aaPredicted RBP4.98□□□□□ -1.61
RNU6-1249P-201ENST00000363237 SMPD1P17405 629 aa4.98□□□□□ -1.61
RNU6-1249P-201ENST00000363237 ARNTP27540 789 aa4.98□□□□□ -1.61
RNU6-1249P-201ENST00000363237 CDKN1CP49918 316 aaPredicted RBP4.98□□□□□ -1.61
RNU6-1249P-201ENST00000363237 ZNF157P51786 506 aaPredicted RBP4.98□□□□□ -1.61
RNU6-1249P-201ENST00000363237 SIK1P57059 783 aa4.98□□□□□ -1.61
RNU6-1249P-201ENST00000363237 EVA1CP58658 441 aa4.98□□□□□ -1.61
RNU6-1249P-201ENST00000363237 NFKB2Q00653 900 aa4.98□□□□□ -1.61
RNU6-1249P-201ENST00000363237 CT47A1Q5JQC4 288 aaPredicted RBP4.98□□□□□ -1.61
RNU6-1249P-201ENST00000363237 DDX42Q86XP3 938 aaKnown RBP eCLIP4.98□□□□□ -1.61
RNU6-1249P-201ENST00000363237 LRRC47Q8N1G4 583 aaKnown RBP4.98□□□□□ -1.61
RNU6-1249P-201ENST00000363237 ZBTB38Q8NAP3 1195 aaPredicted RBP4.98□□□□□ -1.61
RNU6-1249P-201ENST00000363237 PBX4Q9BYU1 374 aa4.98□□□□□ -1.61
RNU6-1249P-201ENST00000363237 TOR4AQ9NXH8 423 aa4.98□□□□□ -1.61
RNU6-1249P-201ENST00000363237 THRAP3Q9Y2W1 955 aaKnown RBP4.98□□□□□ -1.61
RNU6-1249P-201ENST00000363237 TTLL8A6PVC2 850 aa4.97□□□□□ -1.61
RNU6-1249P-201ENST00000363237 B2RBV5 119 aa4.97□□□□□ -1.61
RNU6-1249P-201ENST00000363237 B3GALT4O96024 378 aa4.97□□□□□ -1.61
RNU6-1249P-201ENST00000363237 FAM153BP0C7A2 387 aa4.97□□□□□ -1.61
RNU6-1249P-201ENST00000363237 POU3F3P20264 500 aaPredicted RBP4.97□□□□□ -1.61
RNU6-1249P-201ENST00000363237 EPHB1P54762 984 aa4.97□□□□□ -1.61
RNU6-1249P-201ENST00000363237 BIRC2Q13490 618 aa4.97□□□□□ -1.61
RNU6-1249P-201ENST00000363237 MLECQ14165 292 aa4.97□□□□□ -1.61
RNU6-1249P-201ENST00000363237 RASIP1Q5U651 963 aa4.97□□□□□ -1.61
RNU6-1249P-201ENST00000363237 INTS3Q68E01 1043 aaKnown RBP4.97□□□□□ -1.61
RNU6-1249P-201ENST00000363237 RUFY4Q6ZNE9 571 aa4.97□□□□□ -1.61
RNU6-1249P-201ENST00000363237 SULF2Q8IWU5 870 aa4.97□□□□□ -1.61
RNU6-1249P-201ENST00000363237 DDX54Q8TDD1 881 aaKnown RBP4.97□□□□□ -1.61
RNU6-1249P-201ENST00000363237 BSNDQ8WZ55 320 aa4.97□□□□□ -1.61
RNU6-1249P-201ENST00000363237 GAL3ST3Q96A11 431 aa4.97□□□□□ -1.61
RNU6-1249P-201ENST00000363237 HHIPQ96QV1 700 aa4.97□□□□□ -1.61
RNU6-1249P-201ENST00000363237 GAS2L1Q99501 681 aaPredicted RBP4.97□□□□□ -1.61
RNU6-1249P-201ENST00000363237 MUC3BQ9H195 1237 aa4.97□□□□□ -1.61
RNU6-1249P-201ENST00000363237 CBX8Q9HC52 389 aa4.97□□□□□ -1.61
RNU6-1249P-201ENST00000363237 MARK1Q9P0L2 795 aa4.97□□□□□ -1.61
RNU6-1249P-201ENST00000363237 POLR3KQ9Y2Y1 108 aaPredicted RBP4.97□□□□□ -1.61
RNU6-1249P-201ENST00000363237 WASHC2CQ9Y4E1 1318 aa4.97□□□□□ -1.61
RNU6-1249P-201ENST00000363237 A0A087X0B3 334 aa4.96□□□□□ -1.62
RNU6-1249P-201ENST00000363237 GDF9O60383 454 aa4.96□□□□□ -1.62
RNU6-1249P-201ENST00000363237 ALDH1L1O75891 902 aa4.96□□□□□ -1.62
RNU6-1249P-201ENST00000363237 CPEP16870 476 aa4.96□□□□□ -1.62
RNU6-1249P-201ENST00000363237 TNP2Q05952 138 aa4.96□□□□□ -1.62
RNU6-1249P-201ENST00000363237 PCDH1Q08174 1060 aa4.96□□□□□ -1.62
RNU6-1249P-201ENST00000363237 SPEM2Q0P670 501 aa4.96□□□□□ -1.62
RNU6-1249P-201ENST00000363237 PABPC4Q13310 644 aaKnown RBP eCLIP4.96□□□□□ -1.62
RNU6-1249P-201ENST00000363237 NEUROD1Q13562 356 aa4.96□□□□□ -1.62
RNU6-1249P-201ENST00000363237 SUZ12Q15022 739 aaKnown RBP4.96□□□□□ -1.62
RNU6-1249P-201ENST00000363237 PCSK7Q16549 785 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms