RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 EFR3BQ9Y2G0 817 aa8.56□□□□□ -1.04
RNU4-39P-201ENST00000362455 LINC01387J3KSC0 135 aa8.55□□□□□ -1.04
RNU4-39P-201ENST00000362455 F13A1P00488 732 aa8.55□□□□□ -1.04
RNU4-39P-201ENST00000362455 CRKP46108 304 aa8.55□□□□□ -1.04
RNU4-39P-201ENST00000362455 NASPP49321 788 aaPredicted RBP8.55□□□□□ -1.04
RNU4-39P-201ENST00000362455 GSTM4Q03013 218 aa8.55□□□□□ -1.04
RNU4-39P-201ENST00000362455 SEPT6Q14141 434 aa8.55□□□□□ -1.04
RNU4-39P-201ENST00000362455 CCDC84Q86UT8 332 aaPredicted RBP8.55□□□□□ -1.04
RNU4-39P-201ENST00000362455 JARID2Q92833 1246 aaPredicted RBP8.55□□□□□ -1.04
RNU4-39P-201ENST00000362455 SOX17Q9H6I2 414 aaPredicted RBP8.55□□□□□ -1.04
RNU4-39P-201ENST00000362455 ARAP1Q96P48 1450 aa8.54□□□□□ -1.04
RNU4-39P-201ENST00000362455 OIP5O43482 229 aa8.54□□□□□ -1.04
RNU4-39P-201ENST00000362455 PIP4K2BP78356 416 aa8.54□□□□□ -1.04
RNU4-39P-201ENST00000362455 ZNF252P-AS1Q0IIN9 211 aa8.54□□□□□ -1.04
RNU4-39P-201ENST00000362455 AP3B2Q13367 1082 aa8.54□□□□□ -1.04
RNU4-39P-201ENST00000362455 PDZD3Q86UT5 571 aa8.54□□□□□ -1.04
RNU4-39P-201ENST00000362455 GATAD2BQ8WXI9 593 aa8.54□□□□□ -1.04
RNU4-39P-201ENST00000362455 BTBD6Q96KE9 485 aa8.54□□□□□ -1.04
RNU4-39P-201ENST00000362455 FAM221AA4D161 298 aa8.53□□□□□ -1.04
RNU4-39P-201ENST00000362455 SHISA8B8ZZ34 492 aa8.53□□□□□ -1.04
RNU4-39P-201ENST00000362455 TLR3O15455 904 aaKnown RBP8.53□□□□□ -1.04
RNU4-39P-201ENST00000362455 SOX9P48436 509 aa8.53□□□□□ -1.04
RNU4-39P-201ENST00000362455 C19orf57Q0VDD7 668 aa8.53□□□□□ -1.04
RNU4-39P-201ENST00000362455 FAM117BQ6P1L5 589 aa8.53□□□□□ -1.04
RNU4-39P-201ENST00000362455 WFDC8Q8IUA0 241 aa8.53□□□□□ -1.04
RNU4-39P-201ENST00000362455 FBXO27Q8NI29 283 aa8.53□□□□□ -1.04
RNU4-39P-201ENST00000362455 NKD1Q969G9 470 aa8.53□□□□□ -1.04
RNU4-39P-201ENST00000362455 GAL3ST3Q96A11 431 aa8.53□□□□□ -1.04
RNU4-39P-201ENST00000362455 TDRD9Q8NDG6 1382 aaKnown RBP8.52□□□□□ -1.05
RNU4-39P-201ENST00000362455 ROBO2Q9HCK4 1378 aa8.52□□□□□ -1.05
RNU4-39P-201ENST00000362455 FSCN2O14926 492 aa8.52□□□□□ -1.05
RNU4-39P-201ENST00000362455 STK10O94804 968 aaKnown RBP8.52□□□□□ -1.05
RNU4-39P-201ENST00000362455 SSBP05455 408 aaKnown RBP eCLIP8.52□□□□□ -1.05
RNU4-39P-201ENST00000362455 GSTP1P09211 210 aaKnown RBP8.52□□□□□ -1.05
RNU4-39P-201ENST00000362455 BCRP11274 1271 aa8.52□□□□□ -1.05
RNU4-39P-201ENST00000362455 ARL4DP49703 201 aa8.52□□□□□ -1.05
RNU4-39P-201ENST00000362455 COL9A2Q14055 689 aaPredicted RBP8.52□□□□□ -1.05
RNU4-39P-201ENST00000362455 SEZ6Q53EL9 994 aa8.52□□□□□ -1.05
RNU4-39P-201ENST00000362455 MAP1SQ66K74 1059 aaPredicted RBP8.52□□□□□ -1.05
RNU4-39P-201ENST00000362455 MSL1Q68DK7 614 aa8.52□□□□□ -1.05
RNU4-39P-201ENST00000362455 MPRIPQ6WCQ1 1025 aa8.52□□□□□ -1.05
RNU4-39P-201ENST00000362455 DPH6Q7L8W6 267 aa8.52□□□□□ -1.05
RNU4-39P-201ENST00000362455 SLITRK4Q8IW52 837 aa8.52□□□□□ -1.05
RNU4-39P-201ENST00000362455 WNT8BQ93098 351 aa8.52□□□□□ -1.05
RNU4-39P-201ENST00000362455 CARD10Q9BWT7 1032 aa8.52□□□□□ -1.05
RNU4-39P-201ENST00000362455 LRRC3Q9BY71 257 aa8.52□□□□□ -1.05
RNU4-39P-201ENST00000362455 LRRC4BQ9NT99 713 aa8.52□□□□□ -1.05
RNU4-39P-201ENST00000362455 WIPF1O43516 503 aa8.51□□□□□ -1.05
RNU4-39P-201ENST00000362455 CILPO75339 1184 aa8.51□□□□□ -1.05
RNU4-39P-201ENST00000362455 PTPN11Q06124 597 aaPredicted RBP8.51□□□□□ -1.05
RNU4-39P-201ENST00000362455 RBL2Q08999 1139 aa8.51□□□□□ -1.05
RNU4-39P-201ENST00000362455 MPP2Q14168 576 aa8.51□□□□□ -1.05
RNU4-39P-201ENST00000362455 LNPKQ9C0E8 428 aa8.51□□□□□ -1.05
RNU4-39P-201ENST00000362455 OSGEPQ9NPF4 335 aa8.51□□□□□ -1.05
RNU4-39P-201ENST00000362455 PRDM6Q9NQX0 595 aa8.51□□□□□ -1.05
RNU4-39P-201ENST00000362455 RAD54L2Q9Y4B4 1467 aa8.51□□□□□ -1.05
RNU4-39P-201ENST00000362455 TRIM37O94972 964 aa8.5□□□□□ -1.05
RNU4-39P-201ENST00000362455 CYP11A1P05108 521 aa8.5□□□□□ -1.05
RNU4-39P-201ENST00000362455 AMPD1P23109 780 aa8.5□□□□□ -1.05
RNU4-39P-201ENST00000362455 SCARA3Q6AZY7 606 aa8.5□□□□□ -1.05
RNU4-39P-201ENST00000362455 KCNB2Q92953 911 aa8.5□□□□□ -1.05
RNU4-39P-201ENST00000362455 HIRIP3Q9BW71 556 aaPredicted RBP8.5□□□□□ -1.05
RNU4-39P-201ENST00000362455 ZC3H12CQ9C0D7 883 aaKnown RBP8.5□□□□□ -1.05
RNU4-39P-201ENST00000362455 NRSN2Q9GZP1 204 aa8.5□□□□□ -1.05
RNU4-39P-201ENST00000362455 POLA1P09884 1462 aaPredicted RBP8.5□□□□□ -1.05
RNU4-39P-201ENST00000362455 EIF4EBP3O60516 100 aaPredicted RBP8.49□□□□□ -1.05
RNU4-39P-201ENST00000362455 ECEL1O95672 775 aa8.49□□□□□ -1.05
RNU4-39P-201ENST00000362455 BPNT1O95861 308 aa8.49□□□□□ -1.05
RNU4-39P-201ENST00000362455 CELA2BP08218 269 aaPredicted RBP8.49□□□□□ -1.05
RNU4-39P-201ENST00000362455 POU4F3Q15319 338 aa8.49□□□□□ -1.05
RNU4-39P-201ENST00000362455 CWF19L2Q2TBE0 894 aaKnown RBP8.49□□□□□ -1.05
RNU4-39P-201ENST00000362455 DIEXFQ68CQ4 756 aaKnown RBP8.49□□□□□ -1.05
RNU4-39P-201ENST00000362455 LYPD4Q6UWN0 246 aa8.49□□□□□ -1.05
RNU4-39P-201ENST00000362455 PMFBP1Q8TBY8 1022 aa8.49□□□□□ -1.05
RNU4-39P-201ENST00000362455 KLHDC7BQ96G42 594 aa8.49□□□□□ -1.05
RNU4-39P-201ENST00000362455 CORO1BQ9BR76 489 aa8.49□□□□□ -1.05
RNU4-39P-201ENST00000362455 STRIP2Q9ULQ0 834 aa8.49□□□□□ -1.05
RNU4-39P-201ENST00000362455 EIF4G3O43432 1585 aaKnown RBP8.48□□□□□ -1.05
RNU4-39P-201ENST00000362455 ABCC8Q09428 1581 aa8.48□□□□□ -1.05
RNU4-39P-201ENST00000362455 TARBP1Q13395 1621 aaKnown RBP8.48□□□□□ -1.05
RNU4-39P-201ENST00000362455 NID1P14543 1247 aa8.48□□□□□ -1.05
RNU4-39P-201ENST00000362455 MAOBP27338 520 aa8.48□□□□□ -1.05
RNU4-39P-201ENST00000362455 COL9A3Q14050 684 aaPredicted RBP8.48□□□□□ -1.05
RNU4-39P-201ENST00000362455 SETDB1Q15047 1291 aa8.48□□□□□ -1.05
RNU4-39P-201ENST00000362455 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.48□□□□□ -1.05
RNU4-39P-201ENST00000362455 REC114Q7Z4M0 266 aa8.48□□□□□ -1.05
RNU4-39P-201ENST00000362455 DMRTC2Q8IXT2 367 aaPredicted RBP8.48□□□□□ -1.05
RNU4-39P-201ENST00000362455 CPLX3Q8WVH0 158 aa8.48□□□□□ -1.05
RNU4-39P-201ENST00000362455 ZNF408Q9H9D4 720 aa8.48□□□□□ -1.05
RNU4-39P-201ENST00000362455 CACNA2D2Q9NY47 1150 aa8.48□□□□□ -1.05
RNU4-39P-201ENST00000362455 MRVI1Q9Y6F6 885 aa8.48□□□□□ -1.05
RNU4-39P-201ENST00000362455 SOGA1O94964 1423 aa8.47□□□□□ -1.05
RNU4-39P-201ENST00000362455 TM4SF5O14894 197 aa8.47□□□□□ -1.05
RNU4-39P-201ENST00000362455 MCM4P33991 863 aa8.47□□□□□ -1.05
RNU4-39P-201ENST00000362455 CCDC81Q6ZN84 652 aa8.47□□□□□ -1.05
RNU4-39P-201ENST00000362455 KLHL23Q8NBE8 558 aa8.47□□□□□ -1.05
RNU4-39P-201ENST00000362455 GALNT11Q8NCW6 608 aa8.47□□□□□ -1.05
RNU4-39P-201ENST00000362455 GPBAR1Q8TDU6 330 aa8.47□□□□□ -1.05
RNU4-39P-201ENST00000362455 CCDC86Q9H6F5 360 aaKnown RBP8.47□□□□□ -1.05
RNU4-39P-201ENST00000362455 BRMS1Q9HCU9 246 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms