RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 LRMPQ12912 555 aa18.58■□□□□ 0.57
SCAF1-201ENST00000360565 TAF3Q5VWG9 929 aa18.58■□□□□ 0.57
SCAF1-201ENST00000360565 KIF2CQ99661 725 aa18.58■□□□□ 0.57
SCAF1-201ENST00000360565 CCDC94Q9BW85 323 aaPredicted RBP18.58■□□□□ 0.57
SCAF1-201ENST00000360565 LRRC7Q96NW7 1537 aa18.58■□□□□ 0.57
SCAF1-201ENST00000360565 TUBB4AP04350 444 aa18.58■□□□□ 0.57
SCAF1-201ENST00000360565 PLIN2Q99541 437 aa18.58■□□□□ 0.57
SCAF1-201ENST00000360565 KCNJ14Q9UNX9 436 aa18.58■□□□□ 0.57
SCAF1-201ENST00000360565 SCRN1Q12765 414 aa18.58■□□□□ 0.56
SCAF1-201ENST00000360565 PARP10Q53GL7 1025 aa18.58■□□□□ 0.56
SCAF1-201ENST00000360565 TULP4Q9NRJ4 1543 aa18.58■□□□□ 0.56
SCAF1-201ENST00000360565 TERF1P54274 439 aa18.58■□□□□ 0.56
SCAF1-201ENST00000360565 ADALQ6DHV7 355 aa18.58■□□□□ 0.56
SCAF1-201ENST00000360565 SPATA5Q8NB90 893 aa18.58■□□□□ 0.56
SCAF1-201ENST00000360565 SRRTQ9BXP5 876 aaKnown RBP18.58■□□□□ 0.56
SCAF1-201ENST00000360565 POTEB2H3BUK9 544 aa18.57■□□□□ 0.56
SCAF1-201ENST00000360565 CUTAO60888 179 aa18.57■□□□□ 0.56
SCAF1-201ENST00000360565 MATR3P43243 847 aaKnown RBP eCLIP18.57■□□□□ 0.56
SCAF1-201ENST00000360565 TRERF1Q96PN7 1200 aa18.57■□□□□ 0.56
SCAF1-201ENST00000360565 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.57■□□□□ 0.56
SCAF1-201ENST00000360565 ERBB3P21860 1342 aa18.57■□□□□ 0.56
SCAF1-201ENST00000360565 MCM6Q14566 821 aa18.57■□□□□ 0.56
SCAF1-201ENST00000360565 VPS36Q86VN1 386 aa18.57■□□□□ 0.56
SCAF1-201ENST00000360565 BAG1Q99933 345 aaPredicted RBP18.57■□□□□ 0.56
SCAF1-201ENST00000360565 ALKQ9UM73 1620 aa18.56■□□□□ 0.56
SCAF1-201ENST00000360565 MCM3P25205 808 aa18.56■□□□□ 0.56
SCAF1-201ENST00000360565 TMEM132AQ24JP5 1023 aa18.56■□□□□ 0.56
SCAF1-201ENST00000360565 hCG_1642624A0A1W2PR95 340 aa18.56■□□□□ 0.56
SCAF1-201ENST00000360565 MYO1BO43795 1136 aa18.56■□□□□ 0.56
SCAF1-201ENST00000360565 KIAA0754O94854 1291 aa18.56■□□□□ 0.56
SCAF1-201ENST00000360565 PDIA3P30101 505 aaKnown RBP18.56■□□□□ 0.56
SCAF1-201ENST00000360565 KIAA1468Q9P260 1216 aa18.56■□□□□ 0.56
SCAF1-201ENST00000360565 LAMC1P11047 1609 aa18.56■□□□□ 0.56
SCAF1-201ENST00000360565 ERBB4Q15303 1308 aa18.56■□□□□ 0.56
SCAF1-201ENST00000360565 CTAGE15A4D2H0 777 aa18.55■□□□□ 0.56
SCAF1-201ENST00000360565 HLA-DOAP06340 250 aa18.55■□□□□ 0.56
SCAF1-201ENST00000360565 CTAGE8P0CG41 777 aa18.55■□□□□ 0.56
SCAF1-201ENST00000360565 CYLC1P35663 651 aaPredicted RBP18.55■□□□□ 0.56
SCAF1-201ENST00000360565 PTPN12Q05209 780 aaKnown RBP18.55■□□□□ 0.56
SCAF1-201ENST00000360565 PICALMQ13492 652 aa18.55■□□□□ 0.56
SCAF1-201ENST00000360565 NECTIN1Q15223 517 aa18.55■□□□□ 0.56
SCAF1-201ENST00000360565 DTHD1Q6ZMT9 781 aa18.55■□□□□ 0.56
SCAF1-201ENST00000360565 CTAGE6Q86UF2 777 aa18.55■□□□□ 0.56
SCAF1-201ENST00000360565 CTAGE4Q8IX94 777 aa18.55■□□□□ 0.56
SCAF1-201ENST00000360565 DENND2AQ9ULE3 1009 aa18.55■□□□□ 0.56
SCAF1-201ENST00000360565 QRICH2Q9H0J4 1663 aa18.55■□□□□ 0.56
SCAF1-201ENST00000360565 ADCY9O60503 1353 aa18.55■□□□□ 0.56
SCAF1-201ENST00000360565 NLRP12P59046 1061 aa18.55■□□□□ 0.56
SCAF1-201ENST00000360565 NYXQ9GZU5 481 aa18.55■□□□□ 0.56
SCAF1-201ENST00000360565 SLAIN2Q9P270 581 aa18.55■□□□□ 0.56
SCAF1-201ENST00000360565 NFE2L3Q9Y4A8 694 aa18.55■□□□□ 0.56
SCAF1-201ENST00000360565 ADORA1P30542 326 aa18.55■□□□□ 0.56
SCAF1-201ENST00000360565 TRMT1LQ7Z2T5 733 aaKnown RBP18.55■□□□□ 0.56
SCAF1-201ENST00000360565 ALS2CR12Q96Q35 445 aa18.55■□□□□ 0.56
SCAF1-201ENST00000360565 LDHBP07195 334 aaKnown RBP18.55■□□□□ 0.56
SCAF1-201ENST00000360565 CCT6AP40227 531 aaKnown RBP18.55■□□□□ 0.56
SCAF1-201ENST00000360565 AKNAD1Q5T1N1 836 aa18.54■□□□□ 0.56
SCAF1-201ENST00000360565 CUL5Q93034 780 aa18.54■□□□□ 0.56
SCAF1-201ENST00000360565 ZBTB9Q96C00 473 aa18.54■□□□□ 0.56
SCAF1-201ENST00000360565 SETBP1Q9Y6X0 1596 aa18.54■□□□□ 0.56
SCAF1-201ENST00000360565 PDE6AP16499 860 aa18.54■□□□□ 0.56
SCAF1-201ENST00000360565 CTSWP56202 376 aa18.54■□□□□ 0.56
SCAF1-201ENST00000360565 UBXN1Q04323 297 aa18.54■□□□□ 0.56
SCAF1-201ENST00000360565 DRC1Q96MC2 740 aa18.54■□□□□ 0.56
SCAF1-201ENST00000360565 XPO4Q9C0E2 1151 aaKnown RBP18.54■□□□□ 0.56
SCAF1-201ENST00000360565 ZMYM1Q5SVZ6 1142 aa18.54■□□□□ 0.56
SCAF1-201ENST00000360565 C6orf50Q9HD87 102 aa18.54■□□□□ 0.56
SCAF1-201ENST00000360565 RBM28Q9NW13 759 aaKnown RBP18.54■□□□□ 0.56
SCAF1-201ENST00000360565 PCDHA7Q9UN72 937 aa18.54■□□□□ 0.56
SCAF1-201ENST00000360565 TSPOAP1O95153 1857 aa18.53■□□□□ 0.56
SCAF1-201ENST00000360565 ZBTB38Q8NAP3 1195 aaPredicted RBP18.53■□□□□ 0.56
SCAF1-201ENST00000360565 MAPK8IP1Q9UQF2 711 aa18.53■□□□□ 0.56
SCAF1-201ENST00000360565 RTCBQ9Y3I0 505 aaKnown RBP18.53■□□□□ 0.56
SCAF1-201ENST00000360565 LMAN1P49257 510 aa18.53■□□□□ 0.56
SCAF1-201ENST00000360565 ZNF569Q5MCW4 686 aa18.53■□□□□ 0.56
SCAF1-201ENST00000360565 MMRN2Q9H8L6 949 aa18.53■□□□□ 0.56
SCAF1-201ENST00000360565 MED14O60244 1454 aa18.53■□□□□ 0.56
SCAF1-201ENST00000360565 CTAGE9A4FU28 777 aa18.53■□□□□ 0.56
SCAF1-201ENST00000360565 PCCAP05165 728 aaPredicted RBP18.53■□□□□ 0.56
SCAF1-201ENST00000360565 PFKFB1P16118 471 aa18.53■□□□□ 0.56
SCAF1-201ENST00000360565 EHBP1Q8NDI1 1231 aa18.53■□□□□ 0.56
SCAF1-201ENST00000360565 C8orf37Q96NL8 207 aa18.53■□□□□ 0.56
SCAF1-201ENST00000360565 NOP2P46087 812 aaKnown RBP18.53■□□□□ 0.56
SCAF1-201ENST00000360565 PIK3AP1Q6ZUJ8 805 aa18.53■□□□□ 0.56
SCAF1-201ENST00000360565 FBXO18Q8NFZ0 1043 aa18.53■□□□□ 0.56
SCAF1-201ENST00000360565 ERO1AQ96HE7 468 aa18.53■□□□□ 0.56
SCAF1-201ENST00000360565 PUF60Q9UHX1 559 aaKnown RBP18.53■□□□□ 0.56
SCAF1-201ENST00000360565 GUCA1BQ9UMX6 200 aa18.53■□□□□ 0.56
SCAF1-201ENST00000360565 AKR1B15C9JRZ8 316 aaPredicted RBP18.52■□□□□ 0.56
SCAF1-201ENST00000360565 ZNF804AQ7Z570 1209 aa18.52■□□□□ 0.56
SCAF1-201ENST00000360565 CCDC87Q9NVE4 849 aa18.52■□□□□ 0.56
SCAF1-201ENST00000360565 HIBADHP31937 336 aaKnown RBP18.52■□□□□ 0.56
SCAF1-201ENST00000360565 CMTR1Q8N1G2 835 aaKnown RBP18.52■□□□□ 0.56
SCAF1-201ENST00000360565 CCDC24Q8N4L8 307 aa18.52■□□□□ 0.56
SCAF1-201ENST00000360565 IGSF22Q8N9C0 903 aa18.52■□□□□ 0.56
SCAF1-201ENST00000360565 ANKRD2Q9GZV1 360 aa18.52■□□□□ 0.56
SCAF1-201ENST00000360565 MLKLQ8NB16 471 aa18.52■□□□□ 0.55
SCAF1-201ENST00000360565 CALCOCO1Q9P1Z2 691 aa18.52■□□□□ 0.55
SCAF1-201ENST00000360565 MROH5Q6ZUA9 1318 aa18.52■□□□□ 0.55
SCAF1-201ENST00000360565 TNNI2P48788 182 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms