RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 COL1A1P02452 1464 aaPredicted RBP21.41■■□□□ 1.02
PDLIM7-203ENST00000359895 B4E1Z4 1266 aa21.41■■□□□ 1.02
PDLIM7-203ENST00000359895 CDKL5O76039 1030 aa21.41■■□□□ 1.02
PDLIM7-203ENST00000359895 FDPSP14324 419 aaKnown RBP21.41■■□□□ 1.02
PDLIM7-203ENST00000359895 UVSSAQ2YD98 709 aa21.41■■□□□ 1.02
PDLIM7-203ENST00000359895 MTA3Q9BTC8 594 aa21.41■■□□□ 1.02
PDLIM7-203ENST00000359895 ABCF2Q9UG63 623 aa21.41■■□□□ 1.02
PDLIM7-203ENST00000359895 NEDD4P46934 1319 aa21.41■■□□□ 1.02
PDLIM7-203ENST00000359895 MAGEB6P1A0A0J9YX57 407 aa21.4■■□□□ 1.02
PDLIM7-203ENST00000359895 CPLX2Q6PUV4 134 aaKnown RBP21.4■■□□□ 1.02
PDLIM7-203ENST00000359895 MFSD6Q6ZSS7 791 aa21.4■■□□□ 1.02
PDLIM7-203ENST00000359895 SGMS1Q86VZ5 419 aa21.4■■□□□ 1.02
PDLIM7-203ENST00000359895 STAG1Q8WVM7 1258 aa21.4■■□□□ 1.02
PDLIM7-203ENST00000359895 RNF41Q9H4P4 317 aaPredicted RBP21.4■■□□□ 1.02
PDLIM7-203ENST00000359895 IQSEC3Q9UPP2 1182 aaPredicted RBP21.4■■□□□ 1.02
PDLIM7-203ENST00000359895 KIAA1551Q9HCM1 1747 aa21.4■■□□□ 1.02
PDLIM7-203ENST00000359895 NPHP1O15259 732 aa21.4■■□□□ 1.02
PDLIM7-203ENST00000359895 LIFRP42702 1097 aa21.4■■□□□ 1.02
PDLIM7-203ENST00000359895 FAM196AQ6ZSG2 479 aa21.4■■□□□ 1.02
PDLIM7-203ENST00000359895 IGDCC4Q8TDY8 1250 aa21.4■■□□□ 1.02
PDLIM7-203ENST00000359895 DDX19AQ9NUU7 478 aaKnown RBP21.4■■□□□ 1.02
PDLIM7-203ENST00000359895 ORC3Q9UBD5 711 aaPredicted RBP21.4■■□□□ 1.02
PDLIM7-203ENST00000359895 ECM29Q5VYK3 1845 aa21.39■■□□□ 1.01
PDLIM7-203ENST00000359895 METAP2P50579 478 aaKnown RBP eCLIP21.39■■□□□ 1.01
PDLIM7-203ENST00000359895 TPRNQ4KMQ1 711 aa21.39■■□□□ 1.01
PDLIM7-203ENST00000359895 PDLIM2Q96JY6 352 aa21.39■■□□□ 1.01
PDLIM7-203ENST00000359895 C8orf76Q96K31 380 aa21.39■■□□□ 1.01
PDLIM7-203ENST00000359895 RTN4Q9NQC3 1192 aaKnown RBP21.39■■□□□ 1.01
PDLIM7-203ENST00000359895 PRKAB2O43741 272 aa21.38■■□□□ 1.01
PDLIM7-203ENST00000359895 IGSF3O75054 1194 aa21.38■■□□□ 1.01
PDLIM7-203ENST00000359895 HMGB2P26583 209 aaKnown RBP21.38■■□□□ 1.01
PDLIM7-203ENST00000359895 TM4SF1P30408 202 aa21.38■■□□□ 1.01
PDLIM7-203ENST00000359895 CTDSPL2Q05D32 466 aa21.38■■□□□ 1.01
PDLIM7-203ENST00000359895 TMEM67Q5HYA8 995 aa21.38■■□□□ 1.01
PDLIM7-203ENST00000359895 APOA5Q6Q788 366 aa21.38■■□□□ 1.01
PDLIM7-203ENST00000359895 NUP62CLQ9H1M0 184 aa21.38■■□□□ 1.01
PDLIM7-203ENST00000359895 RCOR1Q9UKL0 485 aa21.38■■□□□ 1.01
PDLIM7-203ENST00000359895 TNS1Q9HBL0 1735 aaKnown RBP21.37■■□□□ 1.01
PDLIM7-203ENST00000359895 HIBADHP31937 336 aaKnown RBP21.37■■□□□ 1.01
PDLIM7-203ENST00000359895 ADD1P35611 737 aaKnown RBP21.37■■□□□ 1.01
PDLIM7-203ENST00000359895 FOSBP53539 338 aa21.37■■□□□ 1.01
PDLIM7-203ENST00000359895 SART3Q15020 963 aaKnown RBP21.37■■□□□ 1.01
PDLIM7-203ENST00000359895 NFXL1Q6ZNB6 911 aa21.37■■□□□ 1.01
PDLIM7-203ENST00000359895 AMIGO3Q86WK7 504 aa21.37■■□□□ 1.01
PDLIM7-203ENST00000359895 MIGA1Q8NAN2 632 aa21.37■■□□□ 1.01
PDLIM7-203ENST00000359895 LY9Q9HBG7 655 aa21.37■■□□□ 1.01
PDLIM7-203ENST00000359895 IFIT3O14879 490 aaKnown RBP21.36■■□□□ 1.01
PDLIM7-203ENST00000359895 ZBTB43O43298 467 aa21.36■■□□□ 1.01
PDLIM7-203ENST00000359895 KDM4AO75164 1064 aa21.36■■□□□ 1.01
PDLIM7-203ENST00000359895 HS1BP3Q53T59 392 aa21.36■■□□□ 1.01
PDLIM7-203ENST00000359895 SLC27A3Q5K4L6 730 aa21.36■■□□□ 1.01
PDLIM7-203ENST00000359895 FBXO18Q8NFZ0 1043 aa21.36■■□□□ 1.01
PDLIM7-203ENST00000359895 ANAPC4Q9UJX5 808 aa21.36■■□□□ 1.01
PDLIM7-203ENST00000359895 NID2Q14112 1375 aa21.36■■□□□ 1.01
PDLIM7-203ENST00000359895 LIG1P18858 919 aa21.36■■□□□ 1.01
PDLIM7-203ENST00000359895 NFIXQ14938 502 aa21.36■■□□□ 1.01
PDLIM7-203ENST00000359895 SYNE3Q6ZMZ3 975 aa21.36■■□□□ 1.01
PDLIM7-203ENST00000359895 BRAPQ7Z569 592 aa21.36■■□□□ 1.01
PDLIM7-203ENST00000359895 TMTC2Q8N394 836 aa21.36■■□□□ 1.01
PDLIM7-203ENST00000359895 CNBD1Q8NA66 436 aa21.36■■□□□ 1.01
PDLIM7-203ENST00000359895 RNF214Q8ND24 703 aa21.36■■□□□ 1.01
PDLIM7-203ENST00000359895 RIOK1Q9BRS2 568 aaKnown RBP21.36■■□□□ 1.01
PDLIM7-203ENST00000359895 FUCA2Q9BTY2 467 aa21.36■■□□□ 1.01
PDLIM7-203ENST00000359895 ZSWIM5Q9P217 1185 aa21.36■■□□□ 1.01
PDLIM7-203ENST00000359895 BAZ2AQ9UIF9 1905 aaKnown RBP21.35■■□□□ 1.01
PDLIM7-203ENST00000359895 CCDC69A6NI79 296 aa21.35■■□□□ 1.01
PDLIM7-203ENST00000359895 PPARAQ07869 468 aa21.35■■□□□ 1.01
PDLIM7-203ENST00000359895 MAP3K11Q16584 847 aa21.35■■□□□ 1.01
PDLIM7-203ENST00000359895 GIMAP6Q6P9H5 292 aa21.35■■□□□ 1.01
PDLIM7-203ENST00000359895 BICD2Q8TD16 824 aa21.35■■□□□ 1.01
PDLIM7-203ENST00000359895 PGBD1Q96JS3 809 aa21.35■■□□□ 1.01
PDLIM7-203ENST00000359895 BRIP1Q9BX63 1249 aa21.35■■□□□ 1.01
PDLIM7-203ENST00000359895 LAMB1P07942 1786 aa21.35■■□□□ 1.01
PDLIM7-203ENST00000359895 ERICH2A1L162 156 aa21.34■■□□□ 1.01
PDLIM7-203ENST00000359895 WTIPA6NIX2 430 aaPredicted RBP21.34■■□□□ 1.01
PDLIM7-203ENST00000359895 GOLGA8AA7E2F4 631 aa21.34■■□□□ 1.01
PDLIM7-203ENST00000359895 CCDC192P0DO97 292 aa21.34■■□□□ 1.01
PDLIM7-203ENST00000359895 RCAN1P53805 252 aa21.34■■□□□ 1.01
PDLIM7-203ENST00000359895 GUCY1B3Q02153 619 aa21.34■■□□□ 1.01
PDLIM7-203ENST00000359895 GRAPQ13588 217 aa21.34■■□□□ 1.01
PDLIM7-203ENST00000359895 ADGRA1Q86SQ6 560 aa21.34■■□□□ 1.01
PDLIM7-203ENST00000359895 GRAPLQ8TC17 118 aaPredicted RBP21.34■■□□□ 1.01
PDLIM7-203ENST00000359895 LEMD3Q9Y2U8 911 aa21.34■■□□□ 1.01
PDLIM7-203ENST00000359895 SLC12A7Q9Y666 1083 aa21.34■■□□□ 1.01
PDLIM7-203ENST00000359895 PCP11498 1178 aaKnown RBP21.33■■□□□ 1.01
PDLIM7-203ENST00000359895 CLSTN2Q9H4D0 955 aa21.33■■□□□ 1.01
PDLIM7-203ENST00000359895 LRRC4BQ9NT99 713 aa21.33■■□□□ 1.01
PDLIM7-203ENST00000359895 DACT1Q9NYF0 836 aa21.33■■□□□ 1.01
PDLIM7-203ENST00000359895 DLEC1Q9Y238 1755 aa21.32■■□□□ 1
PDLIM7-203ENST00000359895 ESPNB1AK53 854 aa21.32■■□□□ 1
PDLIM7-203ENST00000359895 SPTY2D1Q68D10 685 aaPredicted RBP21.32■■□□□ 1
PDLIM7-203ENST00000359895 RAB11FIP4Q86YS3 637 aa21.32■■□□□ 1
PDLIM7-203ENST00000359895 CCDC24Q8N4L8 307 aa21.32■■□□□ 1
PDLIM7-203ENST00000359895 NKX2-3Q8TAU0 364 aa21.32■■□□□ 1
PDLIM7-203ENST00000359895 USP28Q96RU2 1077 aa21.32■■□□□ 1
PDLIM7-203ENST00000359895 TNMDQ9H2S6 317 aa21.32■■□□□ 1
PDLIM7-203ENST00000359895 RTEL1Q9NZ71 1219 aa21.32■■□□□ 1
PDLIM7-203ENST00000359895 TACC3Q9Y6A5 838 aa21.32■■□□□ 1
PDLIM7-203ENST00000359895 STK36Q9NRP7 1315 aa21.32■■□□□ 1
PDLIM7-203ENST00000359895 MYH2Q9UKX2 1941 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms