RNA–Protein interactions for RNA: ENST00000354268.8

SMARCAD1-201, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-201ENST00000354268 KLF16Q9BXK1 252 aaPredicted RBP2.75□□□□□ -1.97
SMARCAD1-201ENST00000354268 MFSD1Q9H3U5 465 aa2.75□□□□□ -1.97
SMARCAD1-201ENST00000354268 TMA7Q9Y2S6 64 aaKnown RBP2.75□□□□□ -1.97
SMARCAD1-201ENST00000354268 SALL1Q9NSC2 1324 aa2.75□□□□□ -1.97
SMARCAD1-201ENST00000354268 C9IYK1 514 aa2.75□□□□□ -1.97
SMARCAD1-201ENST00000354268 F6X3S4 739 aa2.75□□□□□ -1.97
SMARCAD1-201ENST00000354268 NCK2O43639 380 aa2.75□□□□□ -1.97
SMARCAD1-201ENST00000354268 GYS1P13807 737 aa2.75□□□□□ -1.97
SMARCAD1-201ENST00000354268 ABHD5Q8WTS1 349 aa2.75□□□□□ -1.97
SMARCAD1-201ENST00000354268 SHTN1A0MZ66 631 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 EML1O00423 815 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 CES2O00748 559 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 PCDHGA12O60330 932 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 TBC1D8O95759 1140 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 F2P00734 622 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 NRN1LQ496H8 165 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 BLOC1S3Q6QNY0 202 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 BICDL1Q6ZP65 573 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 EPS8L2Q9H6S3 715 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 FN3KRPQ9HA64 309 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 TRIM39Q9HCM9 518 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 NCDNQ9UBB6 729 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 PCDHGA9Q9Y5G4 932 aaKnown RBP2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 PCDHGA8Q9Y5G5 932 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 PCDHGA7Q9Y5G6 932 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 PCDHGA6Q9Y5G7 932 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 PCDHGA3Q9Y5H0 932 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 PCDHGA2Q9Y5H1 932 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 ROCK1Q13464 1354 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 SSH2Q76I76 1423 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 H7C1W4 665 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 NR1I2O75469 434 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 MPSTP25325 297 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 PER3P56645 1201 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 EAPPQ56P03 285 aaPredicted RBP2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 ESCO1Q5FWF5 840 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 COLEC12Q5KU26 742 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 FAM102BQ5T8I3 360 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 USPL1Q5W0Q7 1092 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 TPTE2Q6XPS3 522 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 AFAP1Q8N556 730 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 FAM167BQ9BTA0 163 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 SARGQ9BW04 601 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 AMBRA1Q9C0C7 1298 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.74□□□□□ -1.973e-6■■■■■ 31.2
SMARCAD1-201ENST00000354268 ANO2Q9NQ90 1003 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 KCNMB2Q9Y691 235 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 GOLGA3Q08378 1498 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 PLA2R1Q13018 1463 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 CCDC163A0A0D9SF12 145 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 TISP43B9A030 160 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 B9A039 149 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 NCAM2O15394 837 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 CDH3P22223 829 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 KRT83P78385 493 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 C19orf57Q0VDD7 668 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 TRIP4Q15650 581 aaPredicted RBP2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 CCDC146Q8IYE0 955 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 SSH3Q8TE77 659 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 TATDN2Q93075 761 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 MAP10Q9P2G4 905 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 FMNL1O95466 1100 aaPredicted RBP2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 ACTN1P12814 892 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 HNRNPDQ14103 355 aaKnown RBP2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 ZC3H12AQ5D1E8 599 aaKnown RBP2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 TBCELQ5QJ74 424 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 ZFYVE27Q5T4F4 411 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 FILIP1Q7Z7B0 1213 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 CCDC144CPQ8IYA2 1237 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 ZNF654Q8IZM8 581 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 TNIP3Q96KP6 325 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 SEZ6LQ9BYH1 1024 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 DNAI2Q9GZS0 605 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 OSBPL3Q9H4L5 887 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 SLC32A1Q9H598 525 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 ALG13Q9NP73 1137 aaKnown RBP2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 ANLNQ9NQW6 1124 aa2.74□□□□□ -1.97
SMARCAD1-201ENST00000354268 TCOF1Q13428 1488 aaKnown RBP2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 B4DLN1 442 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 EIF3DO15371 548 aaKnown RBP eCLIP2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 HRO43593 1189 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 TRIM23P36406 574 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 MRPL12P52815 198 aaKnown RBP2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 MAP7D1Q3KQU3 841 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 FAM26FQ5R3K3 315 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 CPLX2Q6PUV4 134 aaKnown RBP2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 MAGEB6Q8N7X4 407 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 PI4K2BQ8TCG2 481 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 TTC9Q92623 222 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 CNTNAP3BQ96NU0 1288 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 CNTNAP3Q9BZ76 1288 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 TANGO6Q9C0B7 1094 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 ATP8A1Q9Y2Q0 1164 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 LTBP3Q9NS15 1303 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 MAGI2Q86UL8 1455 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 MEIS3P2A8K0S8 358 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 NFKBIEO00221 500 aa2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 NKRFO15226 690 aaKnown RBP eCLIP2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 GTF2E1P29083 439 aaPredicted RBP2.73□□□□□ -1.97
SMARCAD1-201ENST00000354268 PLA2G5P39877 138 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms