RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 RHOXF2Q9BQY4 288 aa18.1■□□□□ 0.49
PTPN11-201ENST00000351677 ZAP70P43403 619 aa18.1■□□□□ 0.49
PTPN11-201ENST00000351677 PIK3AP1Q6ZUJ8 805 aa18.1■□□□□ 0.49
PTPN11-201ENST00000351677 SELENOOQ9BVL4 669 aa18.1■□□□□ 0.49
PTPN11-201ENST00000351677 LUC7L2Q9Y383 392 aaKnown RBP18.1■□□□□ 0.49
PTPN11-201ENST00000351677 USP44Q9H0E7 712 aa18.1■□□□□ 0.49
PTPN11-201ENST00000351677 TUBB4AP04350 444 aa18.09■□□□□ 0.49
PTPN11-201ENST00000351677 ZNF445P59923 1031 aa18.09■□□□□ 0.49
PTPN11-201ENST00000351677 TOM1O60784 492 aa18.09■□□□□ 0.49
PTPN11-201ENST00000351677 TRAF1Q13077 416 aa18.09■□□□□ 0.49
PTPN11-201ENST00000351677 TMEM110-MUSTN1A8MSY1 372 aa18.09■□□□□ 0.49
PTPN11-201ENST00000351677 POLR2DO15514 142 aaKnown RBP18.09■□□□□ 0.49
PTPN11-201ENST00000351677 FAM13AO94988 1023 aa18.09■□□□□ 0.49
PTPN11-201ENST00000351677 IL17REQ8NFR9 667 aa18.09■□□□□ 0.49
PTPN11-201ENST00000351677 MAPK8IP1Q9UQF2 711 aa18.09■□□□□ 0.49
PTPN11-201ENST00000351677 PLS1Q14651 629 aa18.09■□□□□ 0.49
PTPN11-201ENST00000351677 AKR1B15C9JRZ8 316 aaPredicted RBP18.08■□□□□ 0.49
PTPN11-201ENST00000351677 DIS3L2Q8IYB7 885 aaKnown RBP18.08■□□□□ 0.49
PTPN11-201ENST00000351677 TEX11Q8IYF3 940 aa18.08■□□□□ 0.49
PTPN11-201ENST00000351677 NEURL1BA8MQ27 555 aa18.08■□□□□ 0.48
PTPN11-201ENST00000351677 HIBADHP31937 336 aaKnown RBP18.08■□□□□ 0.48
PTPN11-201ENST00000351677 GPCPD1Q9NPB8 672 aa18.08■□□□□ 0.48
PTPN11-201ENST00000351677 ME3Q16798 604 aa18.08■□□□□ 0.48
PTPN11-201ENST00000351677 VPS16Q9H269 839 aa18.08■□□□□ 0.48
PTPN11-201ENST00000351677 FSD2A1L4K1 749 aa18.07■□□□□ 0.48
PTPN11-201ENST00000351677 DNAJC10Q8IXB1 793 aa18.07■□□□□ 0.48
PTPN11-201ENST00000351677 PHACTR2O75167 634 aa18.07■□□□□ 0.48
PTPN11-201ENST00000351677 TFCP2L1Q9NZI6 479 aa18.07■□□□□ 0.48
PTPN11-201ENST00000351677 ZBTB21Q9ULJ3 1066 aa18.07■□□□□ 0.48
PTPN11-201ENST00000351677 KIF24Q5T7B8 1368 aa18.07■□□□□ 0.48
PTPN11-201ENST00000351677 ATP2C2O75185 946 aa18.07■□□□□ 0.48
PTPN11-201ENST00000351677 CALRP27797 417 aaKnown RBP18.07■□□□□ 0.48
PTPN11-201ENST00000351677 KDM6BO15054 1643 aa18.07■□□□□ 0.48
PTPN11-201ENST00000351677 EIF6P56537 245 aaKnown RBP18.07■□□□□ 0.48
PTPN11-201ENST00000351677 TMEM63CQ9P1W3 806 aa18.07■□□□□ 0.48
PTPN11-201ENST00000351677 PALD1Q9ULE6 856 aa18.07■□□□□ 0.48
PTPN11-201ENST00000351677 PTH1RQ03431 593 aa18.07■□□□□ 0.48
PTPN11-201ENST00000351677 PLEKHG3A1L390 1219 aa18.06■□□□□ 0.48
PTPN11-201ENST00000351677 PARP10Q53GL7 1025 aa18.06■□□□□ 0.48
PTPN11-201ENST00000351677 CNGA4Q8IV77 575 aa18.06■□□□□ 0.48
PTPN11-201ENST00000351677 GIMAP7Q8NHV1 300 aa18.06■□□□□ 0.48
PTPN11-201ENST00000351677 AATFQ9NY61 560 aaKnown RBP eCLIP18.06■□□□□ 0.48
PTPN11-201ENST00000351677 ZNF532Q9HCE3 1301 aa18.06■□□□□ 0.48
PTPN11-201ENST00000351677 ZNF202O95125 648 aa18.06■□□□□ 0.48
PTPN11-201ENST00000351677 ZNF75DP51815 510 aa18.06■□□□□ 0.48
PTPN11-201ENST00000351677 E7EWF7 191 aa18.06■□□□□ 0.48
PTPN11-201ENST00000351677 GJC1P36383 396 aa18.06■□□□□ 0.48
PTPN11-201ENST00000351677 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.06■□□□□ 0.48
PTPN11-201ENST00000351677 IGSF22Q8N9C0 903 aa18.06■□□□□ 0.48
PTPN11-201ENST00000351677 INCENPQ9NQS7 918 aa18.06■□□□□ 0.48
PTPN11-201ENST00000351677 CCDC24Q8N4L8 307 aa18.06■□□□□ 0.48
PTPN11-201ENST00000351677 PLEKHF1Q96S99 279 aa18.06■□□□□ 0.48
PTPN11-201ENST00000351677 SYNCQ9H7C4 482 aa18.06■□□□□ 0.48
PTPN11-201ENST00000351677 CEP170Q5SW79 1584 aa18.05■□□□□ 0.48
PTPN11-201ENST00000351677 FANCCQ00597 558 aa18.05■□□□□ 0.48
PTPN11-201ENST00000351677 SV2BQ7L1I2 683 aa18.05■□□□□ 0.48
PTPN11-201ENST00000351677 RBM26Q5T8P6 1007 aaKnown RBP18.05■□□□□ 0.48
PTPN11-201ENST00000351677 USP37Q86T82 979 aa18.05■□□□□ 0.48
PTPN11-201ENST00000351677 UFL1O94874 794 aa18.05■□□□□ 0.48
PTPN11-201ENST00000351677 BRD1O95696 1058 aa18.05■□□□□ 0.48
PTPN11-201ENST00000351677 CCDC155Q8N6L0 562 aa18.05■□□□□ 0.48
PTPN11-201ENST00000351677 SSH3Q8TE77 659 aa18.05■□□□□ 0.48
PTPN11-201ENST00000351677 LPIN2Q92539 896 aa18.05■□□□□ 0.48
PTPN11-201ENST00000351677 PLVAPQ9BX97 442 aa18.05■□□□□ 0.48
PTPN11-201ENST00000351677 AKNAD1Q5T1N1 836 aa18.05■□□□□ 0.48
PTPN11-201ENST00000351677 KCNJ14Q9UNX9 436 aa18.05■□□□□ 0.48
PTPN11-201ENST00000351677 A0A0D9SFI3 127 aa18.05■□□□□ 0.48
PTPN11-201ENST00000351677 ATP5JP18859 108 aa18.05■□□□□ 0.48
PTPN11-201ENST00000351677 CCDC122Q5T0U0 273 aa18.05■□□□□ 0.48
PTPN11-201ENST00000351677 TRAPPC3LQ5T215 181 aa18.05■□□□□ 0.48
PTPN11-201ENST00000351677 SPATA5Q8NB90 893 aa18.05■□□□□ 0.48
PTPN11-201ENST00000351677 hCG_1642624A0A1W2PR95 340 aa18.04■□□□□ 0.48
PTPN11-201ENST00000351677 IGSF3O75054 1194 aa18.04■□□□□ 0.48
PTPN11-201ENST00000351677 GIGYF1O75420 1035 aaPredicted RBP18.04■□□□□ 0.48
PTPN11-201ENST00000351677 TERF1P54274 439 aa18.04■□□□□ 0.48
PTPN11-201ENST00000351677 DCAF17Q5H9S7 520 aaPredicted RBP18.04■□□□□ 0.48
PTPN11-201ENST00000351677 RSPH14Q9UHP6 348 aa18.04■□□□□ 0.48
PTPN11-201ENST00000351677 PDE4DQ08499 809 aa18.04■□□□□ 0.48
PTPN11-201ENST00000351677 KRT40Q6A162 431 aa18.04■□□□□ 0.48
PTPN11-201ENST00000351677 CCNT1O60563 726 aaKnown RBP18.04■□□□□ 0.48
PTPN11-201ENST00000351677 CUTAO60888 179 aa18.04■□□□□ 0.48
PTPN11-201ENST00000351677 PKP1Q13835 747 aa18.04■□□□□ 0.48
PTPN11-201ENST00000351677 PPP1R9BQ96SB3 815 aa18.04■□□□□ 0.48
PTPN11-201ENST00000351677 HS2ST1Q7LGA3 356 aa18.04■□□□□ 0.48
PTPN11-201ENST00000351677 TTC6Q86TZ1 520 aa18.04■□□□□ 0.48
PTPN11-201ENST00000351677 CNBD1Q8NA66 436 aa18.04■□□□□ 0.48
PTPN11-201ENST00000351677 BBXQ8WY36 941 aaPredicted RBP18.04■□□□□ 0.48
PTPN11-201ENST00000351677 NOC4LQ9BVI4 516 aaKnown RBP18.04■□□□□ 0.48
PTPN11-201ENST00000351677 IFT81Q8WYA0 676 aa18.03■□□□□ 0.48
PTPN11-201ENST00000351677 PARP3Q9Y6F1 533 aa18.03■□□□□ 0.48
PTPN11-201ENST00000351677 RAPGEF1Q13905 1077 aa18.03■□□□□ 0.48
PTPN11-201ENST00000351677 EAF2Q96CJ1 260 aaPredicted RBP18.03■□□□□ 0.48
PTPN11-201ENST00000351677 SEC62Q99442 399 aaKnown RBP18.03■□□□□ 0.48
PTPN11-201ENST00000351677 TRAF5O00463 557 aa18.03■□□□□ 0.48
PTPN11-201ENST00000351677 VPS18Q9P253 973 aa18.03■□□□□ 0.48
PTPN11-201ENST00000351677 ACTN2P35609 894 aa18.03■□□□□ 0.48
PTPN11-201ENST00000351677 PLCD1P51178 756 aa18.03■□□□□ 0.48
PTPN11-201ENST00000351677 TTC38Q5R3I4 469 aa18.03■□□□□ 0.48
PTPN11-201ENST00000351677 SPECC1LQ69YQ0 1117 aa18.03■□□□□ 0.48
PTPN11-201ENST00000351677 LMBR1Q8WVP7 490 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms