RNA–Protein interactions for RNA: ENST00000345080.4

LIN28B-201, Transcript of lin-28 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28B, Length 5,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-201ENST00000345080 CCDC96Q2M329 555 aa8.67□□□□□ -1.02
LIN28B-201ENST00000345080 ISM2Q6H9L7 571 aa8.67□□□□□ -1.02
LIN28B-201ENST00000345080 GIMAP6Q6P9H5 292 aa8.67□□□□□ -1.02
LIN28B-201ENST00000345080 BLOC1S2Q6QNY1 142 aa8.67□□□□□ -1.02
LIN28B-201ENST00000345080 CPLX4Q7Z7G2 160 aa8.67□□□□□ -1.02
LIN28B-201ENST00000345080 IQCA1Q86XH1 822 aa8.67□□□□□ -1.02
LIN28B-201ENST00000345080 PCDHB15Q9Y5E8 787 aa8.67□□□□□ -1.02
LIN28B-201ENST00000345080 F13A1P00488 732 aa8.67□□□□□ -1.02
LIN28B-201ENST00000345080 PRPHP41219 470 aa8.67□□□□□ -1.02
LIN28B-201ENST00000345080 VAV2P52735 878 aa8.67□□□□□ -1.02
LIN28B-201ENST00000345080 TRMT2AQ8IZ69 625 aaKnown RBP8.67□□□□□ -1.02
LIN28B-201ENST00000345080 GPBP1L1Q9HC44 474 aaPredicted RBP8.67□□□□□ -1.02
LIN28B-201ENST00000345080 CHCHD3Q9NX63 227 aaKnown RBP8.67□□□□□ -1.02
LIN28B-201ENST00000345080 ZNF215Q9UL58 517 aaPredicted RBP8.67□□□□□ -1.02
LIN28B-201ENST00000345080 SATB2Q9UPW6 733 aa8.67□□□□□ -1.02
LIN28B-201ENST00000345080 ELMSAN1Q6PJG2 1045 aa8.67□□□□□ -1.02
LIN28B-201ENST00000345080 DCPSQ96C86 337 aaKnown RBP8.67□□□□□ -1.02
LIN28B-201ENST00000345080 CTAGE1Q96RT6 745 aa8.67□□□□□ -1.02
LIN28B-201ENST00000345080 SAMD15Q9P1V8 674 aa8.67□□□□□ -1.02
LIN28B-201ENST00000345080 BCS1LQ9Y276 419 aa8.67□□□□□ -1.02
LIN28B-201ENST00000345080 PRDM15P57071 1507 aaPredicted RBP8.67□□□□□ -1.02
LIN28B-201ENST00000345080 G3BP2Q9UN86 482 aaKnown RBP8.67□□□□□ -1.02
LIN28B-201ENST00000345080 TBX22Q9Y458 520 aa8.67□□□□□ -1.02
LIN28B-201ENST00000345080 AOX1Q06278 1338 aa8.67□□□□□ -1.02
LIN28B-201ENST00000345080 CDKL5O76039 1030 aa8.67□□□□□ -1.02
LIN28B-201ENST00000345080 HMOX1P09601 288 aa8.67□□□□□ -1.02
LIN28B-201ENST00000345080 SLFN14P0C7P3 912 aa8.67□□□□□ -1.02
LIN28B-201ENST00000345080 ALDH1B1P30837 517 aa8.67□□□□□ -1.02
LIN28B-201ENST00000345080 PPARDQ03181 441 aa8.67□□□□□ -1.02
LIN28B-201ENST00000345080 STK3Q13188 491 aa8.67□□□□□ -1.02
LIN28B-201ENST00000345080 PABPC4Q13310 644 aaKnown RBP eCLIP8.67□□□□□ -1.024e-11■■■■■ 27.8
LIN28B-201ENST00000345080 DRP2Q13474 957 aa8.67□□□□□ -1.02
LIN28B-201ENST00000345080 STIM1Q13586 685 aa8.67□□□□□ -1.02
LIN28B-201ENST00000345080 GJC2Q5T442 439 aaPredicted RBP8.67□□□□□ -1.02
LIN28B-201ENST00000345080 FSD1Q9BTV5 496 aa8.67□□□□□ -1.02
LIN28B-201ENST00000345080 ATP10BO94823 1461 aa8.67□□□□□ -1.02
LIN28B-201ENST00000345080 TTC21BQ7Z4L5 1316 aa8.66□□□□□ -1.02
LIN28B-201ENST00000345080 HGSO14964 777 aaPredicted RBP8.66□□□□□ -1.02
LIN28B-201ENST00000345080 SPA17Q15506 151 aa8.66□□□□□ -1.02
LIN28B-201ENST00000345080 ZGPATQ8N5A5 531 aaKnown RBP8.66□□□□□ -1.02
LIN28B-201ENST00000345080 SMARCC2Q8TAQ2 1214 aa8.66□□□□□ -1.02
LIN28B-201ENST00000345080 BTG4Q9NY30 223 aa8.66□□□□□ -1.02
LIN28B-201ENST00000345080 KDM5BQ9UGL1 1544 aa8.66□□□□□ -1.02
LIN28B-201ENST00000345080 PPP1R12BO60237 982 aaPredicted RBP8.66□□□□□ -1.02
LIN28B-201ENST00000345080 SLC4A2P04920 1241 aa8.66□□□□□ -1.02
LIN28B-201ENST00000345080 SYT1P21579 422 aa8.66□□□□□ -1.02
LIN28B-201ENST00000345080 ZNF408Q9H9D4 720 aa8.66□□□□□ -1.02
LIN28B-201ENST00000345080 BTBD11A6QL63 1104 aa8.66□□□□□ -1.02
LIN28B-201ENST00000345080 ZRANB2O95218 330 aaKnown RBP eCLIP8.66□□□□□ -1.02
LIN28B-201ENST00000345080 PNMA6AP0CW24 399 aaPredicted RBP8.66□□□□□ -1.02
LIN28B-201ENST00000345080 ELF1P32519 619 aa8.66□□□□□ -1.02
LIN28B-201ENST00000345080 TPTE2Q6XPS3 522 aa8.66□□□□□ -1.02
LIN28B-201ENST00000345080 ANKRD44Q8N8A2 993 aa8.66□□□□□ -1.02
LIN28B-201ENST00000345080 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.66□□□□□ -1.02
LIN28B-201ENST00000345080 PALMDQ9NP74 551 aa8.66□□□□□ -1.02
LIN28B-201ENST00000345080 ZBTB40Q9NUA8 1239 aa8.66□□□□□ -1.02
LIN28B-201ENST00000345080 HMG20BQ9P0W2 317 aa8.66□□□□□ -1.02
LIN28B-201ENST00000345080 PCDH11XQ9BZA7 1347 aa8.66□□□□□ -1.02
LIN28B-201ENST00000345080 PCDH11YQ9BZA8 1340 aa8.66□□□□□ -1.02
LIN28B-201ENST00000345080 CCDC151A5D8V7 595 aa8.66□□□□□ -1.02
LIN28B-201ENST00000345080 GMNNO75496 209 aa8.66□□□□□ -1.02
LIN28B-201ENST00000345080 CCDC178Q5BJE1 867 aa8.66□□□□□ -1.02
LIN28B-201ENST00000345080 BTN2A1Q7KYR7 527 aa8.66□□□□□ -1.02
LIN28B-201ENST00000345080 ARL10Q8N8L6 244 aa8.66□□□□□ -1.02
LIN28B-201ENST00000345080 ANKRD24Q8TF21 1146 aa8.66□□□□□ -1.02
LIN28B-201ENST00000345080 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.66□□□□□ -1.02
LIN28B-201ENST00000345080 TTC37Q6PGP7 1564 aa8.66□□□□□ -1.02
LIN28B-201ENST00000345080 POLE2P56282 527 aa8.65□□□□□ -1.02
LIN28B-201ENST00000345080 ACRBPQ8NEB7 543 aa8.65□□□□□ -1.02
LIN28B-201ENST00000345080 RAB3IPQ96QF0 476 aaPredicted RBP8.65□□□□□ -1.02
LIN28B-201ENST00000345080 OSBPL9Q96SU4 736 aa8.65□□□□□ -1.02
LIN28B-201ENST00000345080 TAOK3Q9H2K8 898 aa8.65□□□□□ -1.02
LIN28B-201ENST00000345080 SEPT10Q9P0V9 454 aa8.65□□□□□ -1.02
LIN28B-201ENST00000345080 SYCP2Q9BX26 1530 aa8.65□□□□□ -1.02
LIN28B-201ENST00000345080 PPM1FP49593 454 aaPredicted RBP8.65□□□□□ -1.02
LIN28B-201ENST00000345080 ATP2B2Q01814 1243 aa8.65□□□□□ -1.02
LIN28B-201ENST00000345080 SF3A3Q12874 501 aaKnown RBP eCLIP8.65□□□□□ -1.02
LIN28B-201ENST00000345080 SKAP1Q86WV1 359 aa8.65□□□□□ -1.02
LIN28B-201ENST00000345080 C1orf115Q9H7X2 142 aa8.65□□□□□ -1.02
LIN28B-201ENST00000345080 ITGB1BP2Q9UKP3 347 aa8.65□□□□□ -1.02
LIN28B-201ENST00000345080 REREQ9P2R6 1566 aa8.65□□□□□ -1.02
LIN28B-201ENST00000345080 SSH2Q76I76 1423 aa8.65□□□□□ -1.02
LIN28B-201ENST00000345080 TXNDC9O14530 226 aa8.65□□□□□ -1.02
LIN28B-201ENST00000345080 LIG3P49916 1009 aa8.65□□□□□ -1.02
LIN28B-201ENST00000345080 MAP3K7CLP57077 242 aa8.65□□□□□ -1.02
LIN28B-201ENST00000345080 FAM98CQ17RN3 349 aaKnown RBP8.65□□□□□ -1.02
LIN28B-201ENST00000345080 NFXL1Q6ZNB6 911 aa8.65□□□□□ -1.02
LIN28B-201ENST00000345080 P3H4Q92791 437 aa8.65□□□□□ -1.02
LIN28B-201ENST00000345080 ZFXP17010 805 aaPredicted RBP8.65□□□□□ -1.03
LIN28B-201ENST00000345080 TPD52P55327 224 aaPredicted RBP8.65□□□□□ -1.03
LIN28B-201ENST00000345080 KIF5AQ12840 1032 aa8.65□□□□□ -1.03
LIN28B-201ENST00000345080 SPC25Q9HBM1 224 aa8.65□□□□□ -1.03
LIN28B-201ENST00000345080 TTF2Q9UNY4 1162 aaKnown RBP8.65□□□□□ -1.03
LIN28B-201ENST00000345080 IFIT1P09914 478 aaKnown RBP8.64□□□□□ -1.03
LIN28B-201ENST00000345080 MMP14P50281 582 aa8.64□□□□□ -1.03
LIN28B-201ENST00000345080 PRKG1Q13976 671 aa8.64□□□□□ -1.03
LIN28B-201ENST00000345080 ZNF804AQ7Z570 1209 aa8.64□□□□□ -1.03
LIN28B-201ENST00000345080 TSC1Q92574 1164 aa8.64□□□□□ -1.03
LIN28B-201ENST00000345080 STMN2Q93045 179 aa8.64□□□□□ -1.03
LIN28B-201ENST00000345080 SPATA17Q96L03 361 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms