RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 NBPF12Q5TAG4 269 aaPredicted RBP7.95□□□□□ -1.14
USP16-201ENST00000334352 ZFYVE28Q9HCC9 887 aa7.95□□□□□ -1.14
USP16-201ENST00000334352 TMOD2Q9NZR1 351 aa7.95□□□□□ -1.14
USP16-201ENST00000334352 PHF20L1A8MW92 1017 aa7.95□□□□□ -1.14
USP16-201ENST00000334352 GYG1P46976 350 aa7.95□□□□□ -1.14
USP16-201ENST00000334352 SNAPC2Q13487 334 aa7.95□□□□□ -1.14
USP16-201ENST00000334352 GTF3C2Q8WUA4 911 aaPredicted RBP7.95□□□□□ -1.14
USP16-201ENST00000334352 CEP126Q9P2H0 1117 aa7.95□□□□□ -1.14
USP16-201ENST00000334352 IGF2BP3O00425 579 aaKnown RBP eCLIP7.94□□□□□ -1.14
USP16-201ENST00000334352 ATP2B3Q16720 1220 aa7.94□□□□□ -1.14
USP16-201ENST00000334352 PRPF38BQ5VTL8 546 aaKnown RBP7.94□□□□□ -1.14
USP16-201ENST00000334352 C17orf99Q6UX52 265 aa7.94□□□□□ -1.14
USP16-201ENST00000334352 ZNF408Q9H9D4 720 aa7.94□□□□□ -1.14
USP16-201ENST00000334352 NOB1Q9ULX3 412 aaKnown RBP7.94□□□□□ -1.14
USP16-201ENST00000334352 DAGLAQ9Y4D2 1042 aa7.94□□□□□ -1.14
USP16-201ENST00000334352 GREB1LQ9C091 1923 aaPredicted RBP7.94□□□□□ -1.14
USP16-201ENST00000334352 MROH7-TTC4A0A0A0MT08 1334 aa7.94□□□□□ -1.14
USP16-201ENST00000334352 A0A0G2JLL6 359 aaPredicted RBP7.94□□□□□ -1.14
USP16-201ENST00000334352 TRPA1O75762 1119 aa7.94□□□□□ -1.14
USP16-201ENST00000334352 LDHCP07864 332 aa7.94□□□□□ -1.14
USP16-201ENST00000334352 IRF5Q13568 498 aa7.94□□□□□ -1.14
USP16-201ENST00000334352 ATF7IPQ6VMQ6 1270 aa7.94□□□□□ -1.14
USP16-201ENST00000334352 PRRT2Q7Z6L0 340 aaPredicted RBP7.94□□□□□ -1.14
USP16-201ENST00000334352 CCDC85AQ96PX6 553 aaPredicted RBP7.94□□□□□ -1.14
USP16-201ENST00000334352 PTPN18Q99952 460 aa7.94□□□□□ -1.14
USP16-201ENST00000334352 SMC4Q9NTJ3 1288 aa7.94□□□□□ -1.14
USP16-201ENST00000334352 ZBED9Q6R2W3 1325 aa7.93□□□□□ -1.14
USP16-201ENST00000334352 CTNND1O60716 968 aaKnown RBP7.93□□□□□ -1.14
USP16-201ENST00000334352 ATP8B2P98198 1209 aa7.93□□□□□ -1.14
USP16-201ENST00000334352 OTOP1Q7RTM1 612 aa7.93□□□□□ -1.14
USP16-201ENST00000334352 OPTNQ96CV9 577 aa7.93□□□□□ -1.14
USP16-201ENST00000334352 FAM198AQ9UFP1 575 aa7.93□□□□□ -1.14
USP16-201ENST00000334352 NAV1Q8NEY1 1877 aa7.93□□□□□ -1.14
USP16-201ENST00000334352 AOX1Q06278 1338 aa7.93□□□□□ -1.14
USP16-201ENST00000334352 TLR2O60603 784 aa7.93□□□□□ -1.14
USP16-201ENST00000334352 WDHD1O75717 1129 aaPredicted RBP7.93□□□□□ -1.14
USP16-201ENST00000334352 GNAI2P04899 355 aa7.93□□□□□ -1.14
USP16-201ENST00000334352 VGLL4Q14135 290 aa7.93□□□□□ -1.14
USP16-201ENST00000334352 CDC42EP5Q6NZY7 148 aa7.93□□□□□ -1.14
USP16-201ENST00000334352 PAXIP1Q6ZW49 1069 aaPredicted RBP7.93□□□□□ -1.14
USP16-201ENST00000334352 PROCA1Q8NCQ7 364 aaPredicted RBP7.93□□□□□ -1.14
USP16-201ENST00000334352 BRI3BPQ8WY22 251 aa7.93□□□□□ -1.14
USP16-201ENST00000334352 WDR18Q9BV38 432 aa7.93□□□□□ -1.14
USP16-201ENST00000334352 CHMP4BQ9H444 224 aaKnown RBP7.93□□□□□ -1.14
USP16-201ENST00000334352 CSADQ9Y600 493 aa7.93□□□□□ -1.14
USP16-201ENST00000334352 PLCG2P16885 1265 aa7.92□□□□□ -1.14
USP16-201ENST00000334352 SP3Q02447 781 aa7.92□□□□□ -1.14
USP16-201ENST00000334352 FASTKD5Q7L8L6 764 aaKnown RBP7.92□□□□□ -1.14
USP16-201ENST00000334352 UBE2Q1Q7Z7E8 422 aa7.92□□□□□ -1.14
USP16-201ENST00000334352 ZNF333Q96JL9 665 aa7.92□□□□□ -1.14
USP16-201ENST00000334352 LDHBP07195 334 aaKnown RBP7.92□□□□□ -1.14
USP16-201ENST00000334352 BCRP11274 1271 aa7.92□□□□□ -1.14
USP16-201ENST00000334352 BCAMP50895 628 aa7.92□□□□□ -1.14
USP16-201ENST00000334352 GPAT2Q6NUI2 795 aa7.92□□□□□ -1.14
USP16-201ENST00000334352 SCYL3Q8IZE3 742 aa7.92□□□□□ -1.14
USP16-201ENST00000334352 FAM9BQ8IZU0 186 aa7.92□□□□□ -1.14
USP16-201ENST00000334352 EHD4Q9H223 541 aa7.92□□□□□ -1.14
USP16-201ENST00000334352 TDRD3Q9H7E2 651 aaKnown RBP7.92□□□□□ -1.14
USP16-201ENST00000334352 HERC5Q9UII4 1024 aaKnown RBP7.92□□□□□ -1.14
USP16-201ENST00000334352 AFG3L2Q9Y4W6 797 aa7.92□□□□□ -1.14
USP16-201ENST00000334352 IRF6O14896 467 aa7.92□□□□□ -1.14
USP16-201ENST00000334352 CCDC102BQ68D86 513 aa7.92□□□□□ -1.14
USP16-201ENST00000334352 DLK2Q6UY11 383 aa7.92□□□□□ -1.14
USP16-201ENST00000334352 POTEDQ86YR6 584 aa7.92□□□□□ -1.14
USP16-201ENST00000334352 TRMT44Q8IYL2 757 aaKnown RBP7.92□□□□□ -1.14
USP16-201ENST00000334352 DHX36Q9H2U1 1008 aaKnown RBP7.92□□□□□ -1.14
USP16-201ENST00000334352 FRMPD3Q5JV73 1810 aa7.92□□□□□ -1.14
USP16-201ENST00000334352 MYH7P12883 1935 aa7.91□□□□□ -1.14
USP16-201ENST00000334352 PARP14Q460N5 1801 aa7.91□□□□□ -1.14
USP16-201ENST00000334352 RHBDL3P58872 404 aa7.91□□□□□ -1.14
USP16-201ENST00000334352 GRIK5Q16478 980 aa7.91□□□□□ -1.14
USP16-201ENST00000334352 SLC4A10Q6U841 1118 aa7.91□□□□□ -1.14
USP16-201ENST00000334352 LBX2Q6XYB7 198 aa7.91□□□□□ -1.14
USP16-201ENST00000334352 MOB2Q70IA6 237 aa7.91□□□□□ -1.14
USP16-201ENST00000334352 VPS37DQ86XT2 251 aa7.91□□□□□ -1.14
USP16-201ENST00000334352 PXYLP1Q8TE99 480 aa7.91□□□□□ -1.14
USP16-201ENST00000334352 HOXD10P28358 340 aa7.91□□□□□ -1.14
USP16-201ENST00000334352 CRHR2Q13324 411 aa7.91□□□□□ -1.14
USP16-201ENST00000334352 ZKSCAN2Q63HK3 967 aa7.91□□□□□ -1.14
USP16-201ENST00000334352 ERC1Q8IUD2 1116 aa7.91□□□□□ -1.14
USP16-201ENST00000334352 LRRFIP2Q9Y608 721 aaKnown RBP7.91□□□□□ -1.14
USP16-201ENST00000334352 NKX2-3Q8TAU0 364 aa7.9□□□□□ -1.14
USP16-201ENST00000334352 CLMNQ96JQ2 1002 aa7.9□□□□□ -1.14
USP16-201ENST00000334352 C12orf42Q96LP6 360 aa7.9□□□□□ -1.14
USP16-201ENST00000334352 MORF4L1Q9UBU8 362 aa7.9□□□□□ -1.14
USP16-201ENST00000334352 CHMP3Q9Y3E7 222 aa7.9□□□□□ -1.14
USP16-201ENST00000334352 MYH1P12882 1939 aa7.9□□□□□ -1.14
USP16-201ENST00000334352 A0A1W2PPC1 479 aa7.9□□□□□ -1.14
USP16-201ENST00000334352 TBC1D8O95759 1140 aa7.9□□□□□ -1.14
USP16-201ENST00000334352 IGHA2P01877 340 aa7.9□□□□□ -1.14
USP16-201ENST00000334352 TRIM27P14373 513 aa7.9□□□□□ -1.14
USP16-201ENST00000334352 PCDHAC2Q9Y5I4 1007 aa7.9□□□□□ -1.14
USP16-201ENST00000334352 ZBTB7BO15156 539 aaPredicted RBP7.89□□□□□ -1.15
USP16-201ENST00000334352 HOXA7P31268 230 aaPredicted RBP7.89□□□□□ -1.15
USP16-201ENST00000334352 TTLL12Q14166 644 aaPredicted RBP7.89□□□□□ -1.15
USP16-201ENST00000334352 HSP90AB4PQ58FF6 505 aa7.89□□□□□ -1.15
USP16-201ENST00000334352 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.89□□□□□ -1.15
USP16-201ENST00000334352 ANKLE1Q8NAG6 615 aa7.89□□□□□ -1.15
USP16-201ENST00000334352 NSUN4Q96CB9 384 aaKnown RBP7.89□□□□□ -1.15
USP16-201ENST00000334352 XAGE2Q96GT9 111 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms