RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 ATP8B1O43520 1251 aa19.71■□□□□ 0.75
PRKCD-201ENST00000330452 SMC2O95347 1197 aa19.71■□□□□ 0.75
PRKCD-201ENST00000330452 ZC3H12AQ5D1E8 599 aaKnown RBP19.71■□□□□ 0.75
PRKCD-201ENST00000330452 IFFO2Q5TF58 517 aa19.71■□□□□ 0.75
PRKCD-201ENST00000330452 TTC19Q6DKK2 380 aaPredicted RBP19.71■□□□□ 0.75
PRKCD-201ENST00000330452 NR1I2O75469 434 aa19.7■□□□□ 0.74
PRKCD-201ENST00000330452 SEC31AO94979 1220 aaKnown RBP19.7■□□□□ 0.74
PRKCD-201ENST00000330452 SH3TC1Q8TE82 1336 aa19.7■□□□□ 0.74
PRKCD-201ENST00000330452 CEBPZQ03701 1054 aaKnown RBP19.7■□□□□ 0.74
PRKCD-201ENST00000330452 APOBRQ0VD83 1088 aa19.7■□□□□ 0.74
PRKCD-201ENST00000330452 FAM200AQ8TCP9 573 aa19.7■□□□□ 0.74
PRKCD-201ENST00000330452 PUS3Q9BZE2 481 aaKnown RBP19.7■□□□□ 0.74
PRKCD-201ENST00000330452 GLI3P10071 1580 aa19.7■□□□□ 0.74
PRKCD-201ENST00000330452 TPM1P09493 284 aa19.69■□□□□ 0.74
PRKCD-201ENST00000330452 GPTP24298 496 aa19.69■□□□□ 0.74
PRKCD-201ENST00000330452 MNAT1P51948 309 aa19.69■□□□□ 0.74
PRKCD-201ENST00000330452 BICD2Q8TD16 824 aa19.69■□□□□ 0.74
PRKCD-201ENST00000330452 L2HGDHQ9H9P8 463 aa19.69■□□□□ 0.74
PRKCD-201ENST00000330452 NAIF1Q69YI7 327 aaPredicted RBP19.69■□□□□ 0.74
PRKCD-201ENST00000330452 FILIP1Q7Z7B0 1213 aa19.69■□□□□ 0.74
PRKCD-201ENST00000330452 TBC1D8O95759 1140 aa19.69■□□□□ 0.74
PRKCD-201ENST00000330452 CCT2P78371 535 aaKnown RBP19.69■□□□□ 0.74
PRKCD-201ENST00000330452 ANO6Q4KMQ2 910 aa19.69■□□□□ 0.74
PRKCD-201ENST00000330452 DHX32Q7L7V1 743 aaKnown RBP19.69■□□□□ 0.74
PRKCD-201ENST00000330452 CHST3Q7LGC8 479 aa19.69■□□□□ 0.74
PRKCD-201ENST00000330452 EFCAB13Q8IY85 973 aa19.69■□□□□ 0.74
PRKCD-201ENST00000330452 ZNF526Q8TF50 670 aaPredicted RBP19.69■□□□□ 0.74
PRKCD-201ENST00000330452 C21orf2O43822 256 aa19.68■□□□□ 0.74
PRKCD-201ENST00000330452 RPS6KA5O75582 802 aa19.68■□□□□ 0.74
PRKCD-201ENST00000330452 IL15P40933 162 aaPredicted RBP19.68■□□□□ 0.74
PRKCD-201ENST00000330452 KCNQ4P56696 695 aa19.68■□□□□ 0.74
PRKCD-201ENST00000330452 SLC4A9Q96Q91 983 aa19.68■□□□□ 0.74
PRKCD-201ENST00000330452 ERVV-2B6SEH9 535 aa19.68■□□□□ 0.74
PRKCD-201ENST00000330452 ARID4AP29374 1257 aaPredicted RBP19.68■□□□□ 0.74
PRKCD-201ENST00000330452 TADA2BQ86TJ2 420 aa19.68■□□□□ 0.74
PRKCD-201ENST00000330452 MIEF2Q96C03 454 aa19.68■□□□□ 0.74
PRKCD-201ENST00000330452 HELLSQ9NRZ9 838 aa19.68■□□□□ 0.74
PRKCD-201ENST00000330452 PKD1L3Q7Z443 1732 aa19.67■□□□□ 0.74
PRKCD-201ENST00000330452 PALLDQ8WX93 1383 aa19.67■□□□□ 0.74
PRKCD-201ENST00000330452 EYA2O00167 538 aa19.67■□□□□ 0.74
PRKCD-201ENST00000330452 PFKFB2O60825 505 aa19.67■□□□□ 0.74
PRKCD-201ENST00000330452 CTDNEP1O95476 244 aa19.67■□□□□ 0.74
PRKCD-201ENST00000330452 IFIT1P09914 478 aaKnown RBP19.67■□□□□ 0.74
PRKCD-201ENST00000330452 HSPD1P10809 573 aaKnown RBP19.67■□□□□ 0.74
PRKCD-201ENST00000330452 ZMYM1Q5SVZ6 1142 aa19.67■□□□□ 0.74
PRKCD-201ENST00000330452 NSUN7Q8NE18 718 aaKnown RBP19.67■□□□□ 0.74
PRKCD-201ENST00000330452 SMARCC2Q8TAQ2 1214 aa19.67■□□□□ 0.74
PRKCD-201ENST00000330452 FTOQ9C0B1 505 aaKnown RBP eCLIP19.67■□□□□ 0.74
PRKCD-201ENST00000330452 CLSTN2Q9H4D0 955 aa19.67■□□□□ 0.74
PRKCD-201ENST00000330452 NCOA5Q9HCD5 579 aaKnown RBP19.67■□□□□ 0.74
PRKCD-201ENST00000330452 ZRSR1Q15695 479 aaKnown RBP19.67■□□□□ 0.74
PRKCD-201ENST00000330452 SRRTQ9BXP5 876 aaKnown RBP19.67■□□□□ 0.74
PRKCD-201ENST00000330452 CBX8Q9HC52 389 aa19.67■□□□□ 0.74
PRKCD-201ENST00000330452 DDX19AQ9NUU7 478 aaKnown RBP19.67■□□□□ 0.74
PRKCD-201ENST00000330452 ABCC6O95255 1503 aa19.66■□□□□ 0.74
PRKCD-201ENST00000330452 DSCC1Q9BVC3 393 aa19.66■□□□□ 0.74
PRKCD-201ENST00000330452 ORC3Q9UBD5 711 aaPredicted RBP19.66■□□□□ 0.74
PRKCD-201ENST00000330452 ABCA3Q99758 1704 aa19.66■□□□□ 0.74
PRKCD-201ENST00000330452 MAST3O60307 1309 aa19.66■□□□□ 0.74
PRKCD-201ENST00000330452 ANKRD33BA6NCL7 494 aa19.66■□□□□ 0.74
PRKCD-201ENST00000330452 E7EWF7 191 aa19.66■□□□□ 0.74
PRKCD-201ENST00000330452 SETQ01105 290 aaPredicted RBP19.66■□□□□ 0.74
PRKCD-201ENST00000330452 SMIM5Q71RC9 77 aa19.66■□□□□ 0.74
PRKCD-201ENST00000330452 ZNF513Q8N8E2 541 aaPredicted RBP19.66■□□□□ 0.74
PRKCD-201ENST00000330452 FAM89AQ96GI7 184 aa19.66■□□□□ 0.74
PRKCD-201ENST00000330452 CCDC34Q96HJ3 373 aa19.66■□□□□ 0.74
PRKCD-201ENST00000330452 PTPDC1A2A3K4 754 aa19.65■□□□□ 0.74
PRKCD-201ENST00000330452 EXOSC10Q01780 885 aaKnown RBP19.65■□□□□ 0.74
PRKCD-201ENST00000330452 CCDC144BQ3MJ40 725 aa19.65■□□□□ 0.74
PRKCD-201ENST00000330452 CCDC144CPQ8IYA2 1237 aa19.65■□□□□ 0.74
PRKCD-201ENST00000330452 GPR108Q9NPR9 543 aa19.65■□□□□ 0.74
PRKCD-201ENST00000330452 HMGB1P09429 215 aaKnown RBP19.65■□□□□ 0.74
PRKCD-201ENST00000330452 ROBO1Q9Y6N7 1651 aa19.65■□□□□ 0.74
PRKCD-201ENST00000330452 M0R2C6 588 aa19.64■□□□□ 0.73
PRKCD-201ENST00000330452 ZNF75DP51815 510 aa19.64■□□□□ 0.73
PRKCD-201ENST00000330452 FKBP4Q02790 459 aaKnown RBP eCLIP19.64■□□□□ 0.73
PRKCD-201ENST00000330452 CCDC93Q567U6 631 aa19.64■□□□□ 0.73
PRKCD-201ENST00000330452 PLA2G4DQ86XP0 818 aa19.64■□□□□ 0.73
PRKCD-201ENST00000330452 SLC24A3Q9HC58 644 aa19.64■□□□□ 0.73
PRKCD-201ENST00000330452 RNF113AO15541 343 aaKnown RBP19.64■□□□□ 0.73
PRKCD-201ENST00000330452 ADD1P35611 737 aaKnown RBP19.64■□□□□ 0.73
PRKCD-201ENST00000330452 GUCY1B3Q02153 619 aa19.64■□□□□ 0.73
PRKCD-201ENST00000330452 NKX1-1Q15270 411 aaPredicted RBP19.64■□□□□ 0.73
PRKCD-201ENST00000330452 HLFQ16534 295 aa19.64■□□□□ 0.73
PRKCD-201ENST00000330452 FAM182BQ5T319 152 aa19.64■□□□□ 0.73
PRKCD-201ENST00000330452 RBM43Q6ZSC3 357 aaKnown RBP19.64■□□□□ 0.73
PRKCD-201ENST00000330452 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.64■□□□□ 0.73
PRKCD-201ENST00000330452 MICALL1Q8N3F8 863 aa19.64■□□□□ 0.73
PRKCD-201ENST00000330452 NEBLO76041 1014 aa19.63■□□□□ 0.73
PRKCD-201ENST00000330452 KAT2BQ92831 832 aa19.63■□□□□ 0.73
PRKCD-201ENST00000330452 LLPHQ9BRT6 129 aaKnown RBP19.63■□□□□ 0.73
PRKCD-201ENST00000330452 DNAJC25Q9H1X3 360 aa19.63■□□□□ 0.73
PRKCD-201ENST00000330452 TBC1D2BQ9UPU7 963 aa19.63■□□□□ 0.73
PRKCD-201ENST00000330452 LAMB4A4D0S4 1761 aa19.63■□□□□ 0.73
PRKCD-201ENST00000330452 A0A087WUV0 522 aaPredicted RBP19.63■□□□□ 0.73
PRKCD-201ENST00000330452 EXOC5O00471 708 aa19.63■□□□□ 0.73
PRKCD-201ENST00000330452 ADORA1P30542 326 aa19.63■□□□□ 0.73
PRKCD-201ENST00000330452 OSBP2Q969R2 916 aa19.63■□□□□ 0.73
PRKCD-201ENST00000330452 TRMT1Q9NXH9 659 aaKnown RBP19.63■□□□□ 0.73
PRKCD-201ENST00000330452 CFAP45Q9UL16 551 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms