RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 CTCFLQ8NI51 663 aaPredicted RBP11.84□□□□□ -0.51
SF3B2-201ENST00000322535 EXOC4Q96A65 974 aa11.84□□□□□ -0.51
SF3B2-201ENST00000322535 INTS4Q96HW7 963 aaKnown RBP11.84□□□□□ -0.51
SF3B2-201ENST00000322535 TRIM6Q9C030 488 aaPredicted RBP11.84□□□□□ -0.51
SF3B2-201ENST00000322535 G3BP2Q9UN86 482 aaKnown RBP11.84□□□□□ -0.51
SF3B2-201ENST00000322535 SIPA1L3O60292 1781 aaPredicted RBP11.84□□□□□ -0.51
SF3B2-201ENST00000322535 COL14A1Q05707 1796 aaKnown RBP11.84□□□□□ -0.51
SF3B2-201ENST00000322535 AFF2P51816 1311 aa11.84□□□□□ -0.51
SF3B2-201ENST00000322535 BCL9LQ86UU0 1499 aa11.84□□□□□ -0.51
SF3B2-201ENST00000322535 DDX58O95786 925 aaKnown RBP11.83□□□□□ -0.51
SF3B2-201ENST00000322535 F13A1P00488 732 aa11.83□□□□□ -0.51
SF3B2-201ENST00000322535 LIG3P49916 1009 aa11.83□□□□□ -0.51
SF3B2-201ENST00000322535 RPAP2Q8IXW5 612 aaPredicted RBP11.83□□□□□ -0.51
SF3B2-201ENST00000322535 PARD3BQ8TEW8 1205 aa11.83□□□□□ -0.51
SF3B2-201ENST00000322535 RILPL2Q969X0 211 aa11.83□□□□□ -0.51
SF3B2-201ENST00000322535 ZBTB1Q9Y2K1 713 aa11.83□□□□□ -0.51
SF3B2-201ENST00000322535 PARP4Q9UKK3 1724 aaKnown RBP11.83□□□□□ -0.52
SF3B2-201ENST00000322535 TPD52L2O43399 206 aaKnown RBP11.83□□□□□ -0.52
SF3B2-201ENST00000322535 SKAP2O75563 359 aaPredicted RBP11.83□□□□□ -0.52
SF3B2-201ENST00000322535 MAP4K4O95819 1239 aaPredicted RBP11.83□□□□□ -0.52
SF3B2-201ENST00000322535 EVCP57679 992 aa11.83□□□□□ -0.52
SF3B2-201ENST00000322535 NUTM1Q86Y26 1132 aa11.83□□□□□ -0.52
SF3B2-201ENST00000322535 FMNL3Q8IVF7 1028 aa11.83□□□□□ -0.52
SF3B2-201ENST00000322535 EFCAB13Q8IY85 973 aa11.83□□□□□ -0.52
SF3B2-201ENST00000322535 BICC1Q9H694 974 aaKnown RBP11.83□□□□□ -0.52
SF3B2-201ENST00000322535 VEZTQ9HBM0 779 aa11.83□□□□□ -0.52
SF3B2-201ENST00000322535 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.83□□□□□ -0.52
SF3B2-201ENST00000322535 SOS1Q07889 1333 aaPredicted RBP11.83□□□□□ -0.52
SF3B2-201ENST00000322535 SHANK3Q9BYB0 1731 aa11.83□□□□□ -0.52
SF3B2-201ENST00000322535 KIF2AO00139 706 aaPredicted RBP11.83□□□□□ -0.52
SF3B2-201ENST00000322535 PYGLP06737 847 aa11.83□□□□□ -0.52
SF3B2-201ENST00000322535 ERCC3P19447 782 aa11.83□□□□□ -0.52
SF3B2-201ENST00000322535 RPS6KA3P51812 740 aa11.83□□□□□ -0.52
SF3B2-201ENST00000322535 TMEM87AQ8NBN3 555 aa11.83□□□□□ -0.52
SF3B2-201ENST00000322535 TSPAN18Q96SJ8 248 aa11.83□□□□□ -0.52
SF3B2-201ENST00000322535 ZSWIM4Q9H7M6 989 aa11.83□□□□□ -0.52
SF3B2-201ENST00000322535 PSD3Q9NYI0 1048 aa11.83□□□□□ -0.52
SF3B2-201ENST00000322535 ANAPC4Q9UJX5 808 aa11.83□□□□□ -0.52
SF3B2-201ENST00000322535 PLCH1Q4KWH8 1693 aa11.83□□□□□ -0.52
SF3B2-201ENST00000322535 DISP2A7MBM2 1401 aa11.83□□□□□ -0.52
SF3B2-201ENST00000322535 RPAP1Q9BWH6 1393 aaPredicted RBP11.82□□□□□ -0.52
SF3B2-201ENST00000322535 A0A087WZG4 1122 aa11.82□□□□□ -0.52
SF3B2-201ENST00000322535 NEURL1BA8MQ27 555 aa11.82□□□□□ -0.52
SF3B2-201ENST00000322535 NEXNQ0ZGT2 675 aa11.82□□□□□ -0.52
SF3B2-201ENST00000322535 SCRN1Q12765 414 aa11.82□□□□□ -0.52
SF3B2-201ENST00000322535 ZRSR1Q15695 479 aaKnown RBP11.82□□□□□ -0.52
SF3B2-201ENST00000322535 CC2D1AQ6P1N0 951 aaPredicted RBP11.82□□□□□ -0.52
SF3B2-201ENST00000322535 ACRBPQ8NEB7 543 aa11.82□□□□□ -0.52
SF3B2-201ENST00000322535 KAZALD1Q96I82 304 aa11.82□□□□□ -0.52
SF3B2-201ENST00000322535 SH3GL3Q99963 347 aa11.82□□□□□ -0.52
SF3B2-201ENST00000322535 ARFGAP3Q9NP61 516 aa11.82□□□□□ -0.52
SF3B2-201ENST00000322535 TOGARAM1Q9Y4F4 1720 aa11.82□□□□□ -0.52
SF3B2-201ENST00000322535 GRM8O00222 908 aa11.82□□□□□ -0.52
SF3B2-201ENST00000322535 GCFC2P16383 781 aaKnown RBP11.82□□□□□ -0.52
SF3B2-201ENST00000322535 RWDD2BP57060 319 aa11.82□□□□□ -0.52
SF3B2-201ENST00000322535 ATP8B2P98198 1209 aa11.82□□□□□ -0.52
SF3B2-201ENST00000322535 TRAF1Q13077 416 aa11.82□□□□□ -0.52
SF3B2-201ENST00000322535 HLFQ16534 295 aa11.82□□□□□ -0.52
SF3B2-201ENST00000322535 ATL2Q8NHH9 583 aa11.82□□□□□ -0.52
SF3B2-201ENST00000322535 MICAL1Q8TDZ2 1067 aa11.82□□□□□ -0.52
SF3B2-201ENST00000322535 SUDS3Q9H7L9 328 aaPredicted RBP11.82□□□□□ -0.52
SF3B2-201ENST00000322535 TFIP11Q9UBB9 837 aaKnown RBP11.82□□□□□ -0.52
SF3B2-201ENST00000322535 CAPN15O75808 1086 aa11.81□□□□□ -0.52
SF3B2-201ENST00000322535 CCZ1BP86790 482 aa11.81□□□□□ -0.52
SF3B2-201ENST00000322535 CCZ1P86791 482 aaPredicted RBP11.81□□□□□ -0.52
SF3B2-201ENST00000322535 LINS1Q8NG48 757 aa11.81□□□□□ -0.52
SF3B2-201ENST00000322535 PDE11AQ9HCR9 933 aa11.81□□□□□ -0.52
SF3B2-201ENST00000322535 ATP6V1DQ9Y5K8 247 aa11.81□□□□□ -0.52
SF3B2-201ENST00000322535 BECN2A8MW95 431 aa11.81□□□□□ -0.52
SF3B2-201ENST00000322535 PAX3P23760 479 aa11.81□□□□□ -0.52
SF3B2-201ENST00000322535 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.81□□□□□ -0.52
SF3B2-201ENST00000322535 METTL22Q9BUU2 404 aaPredicted RBP11.81□□□□□ -0.52
SF3B2-201ENST00000322535 GOPCQ9HD26 462 aa11.81□□□□□ -0.52
SF3B2-201ENST00000322535 MCM8Q9UJA3 840 aa11.81□□□□□ -0.52
SF3B2-201ENST00000322535 ABCC6O95255 1503 aa11.81□□□□□ -0.52
SF3B2-201ENST00000322535 SLIT2O94813 1529 aa11.8□□□□□ -0.52
SF3B2-201ENST00000322535 A0A087WUV0 522 aaPredicted RBP11.8□□□□□ -0.52
SF3B2-201ENST00000322535 FRMD3A2A2Y4 597 aa11.8□□□□□ -0.52
SF3B2-201ENST00000322535 N4BP1O75113 896 aaKnown RBP11.8□□□□□ -0.52
SF3B2-201ENST00000322535 GCKRQ14397 625 aa11.8□□□□□ -0.52
SF3B2-201ENST00000322535 PPP1R13BQ96KQ4 1090 aa11.8□□□□□ -0.52
SF3B2-201ENST00000322535 BAG1Q99933 345 aaPredicted RBP11.8□□□□□ -0.52
SF3B2-201ENST00000322535 TSPYL2Q9H2G4 693 aaPredicted RBP11.8□□□□□ -0.52
SF3B2-201ENST00000322535 HMMRO75330 724 aa11.8□□□□□ -0.52
SF3B2-201ENST00000322535 CPA1P15085 419 aa11.8□□□□□ -0.52
SF3B2-201ENST00000322535 NEDD9Q14511 834 aa11.8□□□□□ -0.52
SF3B2-201ENST00000322535 KIRREL3Q8IZU9 778 aa11.8□□□□□ -0.52
SF3B2-201ENST00000322535 FAM89AQ96GI7 184 aa11.8□□□□□ -0.52
SF3B2-201ENST00000322535 FAM163AQ96GL9 167 aaPredicted RBP11.8□□□□□ -0.52
SF3B2-201ENST00000322535 RABEP2Q9H5N1 569 aa11.8□□□□□ -0.52
SF3B2-201ENST00000322535 RMI1Q9H9A7 625 aa11.8□□□□□ -0.52
SF3B2-201ENST00000322535 L2HGDHQ9H9P8 463 aa11.8□□□□□ -0.52
SF3B2-201ENST00000322535 KIF9Q9HAQ2 790 aa11.8□□□□□ -0.52
SF3B2-201ENST00000322535 COL22A1Q8NFW1 1626 aaPredicted RBP11.8□□□□□ -0.52
SF3B2-201ENST00000322535 RTN2O75298 545 aa11.8□□□□□ -0.52
SF3B2-201ENST00000322535 PPFIA2O75334 1257 aa11.8□□□□□ -0.52
SF3B2-201ENST00000322535 ITPK1Q13572 414 aa11.8□□□□□ -0.52
SF3B2-201ENST00000322535 DDX46Q7L014 1031 aaKnown RBP11.8□□□□□ -0.52
SF3B2-201ENST00000322535 STAG1Q8WVM7 1258 aa11.8□□□□□ -0.52
SF3B2-201ENST00000322535 ZBTB10Q96DT7 871 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms