RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 FBXW7Q969H0 707 aa10.08□□□□□ -0.8
CLK1-201ENST00000321356 HSD3B7Q9H2F3 369 aa10.08□□□□□ -0.8
CLK1-201ENST00000321356 PRDM11Q9NQV5 511 aa10.08□□□□□ -0.8
CLK1-201ENST00000321356 DDX41Q9UJV9 622 aaKnown RBP10.08□□□□□ -0.8
CLK1-201ENST00000321356 ZNF215Q9UL58 517 aaPredicted RBP10.08□□□□□ -0.8
CLK1-201ENST00000321356 CDKL5O76039 1030 aa10.08□□□□□ -0.8
CLK1-201ENST00000321356 TPM4P67936 248 aa10.08□□□□□ -0.8
CLK1-201ENST00000321356 TRDNQ13061 729 aa10.08□□□□□ -0.8
CLK1-201ENST00000321356 TTF1Q15361 905 aaPredicted RBP10.08□□□□□ -0.8
CLK1-201ENST00000321356 UBE3CQ15386 1083 aa10.08□□□□□ -0.8
CLK1-201ENST00000321356 TAF7LQ5H9L4 462 aa10.08□□□□□ -0.8
CLK1-201ENST00000321356 VPS37DQ86XT2 251 aa10.08□□□□□ -0.8
CLK1-201ENST00000321356 ERO1AQ96HE7 468 aa10.08□□□□□ -0.8
CLK1-201ENST00000321356 PPP1R13BQ96KQ4 1090 aa10.08□□□□□ -0.8
CLK1-201ENST00000321356 MAP3K14Q99558 947 aa10.08□□□□□ -0.8
CLK1-201ENST00000321356 ALG1Q9BT22 464 aa10.08□□□□□ -0.8
CLK1-201ENST00000321356 TEX13AQ9BXU3 409 aaPredicted RBP10.08□□□□□ -0.8
CLK1-201ENST00000321356 L2HGDHQ9H9P8 463 aa10.08□□□□□ -0.8
CLK1-201ENST00000321356 TRMT1Q9NXH9 659 aaKnown RBP10.08□□□□□ -0.8
CLK1-201ENST00000321356 TIAM2Q8IVF5 1701 aa10.08□□□□□ -0.8
CLK1-201ENST00000321356 DOCK2Q92608 1830 aa10.08□□□□□ -0.8
CLK1-201ENST00000321356 CHD4Q14839 1912 aa10.08□□□□□ -0.8
CLK1-201ENST00000321356 BIN1O00499 593 aa10.07□□□□□ -0.8
CLK1-201ENST00000321356 SMC2O95347 1197 aa10.07□□□□□ -0.8
CLK1-201ENST00000321356 SFPQP23246 707 aaKnown RBP eCLIP10.07□□□□□ -0.8
CLK1-201ENST00000321356 SYKP43405 635 aa10.07□□□□□ -0.8
CLK1-201ENST00000321356 METAP2P50579 478 aaKnown RBP eCLIP10.07□□□□□ -0.8
CLK1-201ENST00000321356 C1QBPQ07021 282 aaKnown RBP10.07□□□□□ -0.8
CLK1-201ENST00000321356 ALX1Q15699 326 aa10.07□□□□□ -0.8
CLK1-201ENST00000321356 NTRK3Q16288 839 aa10.07□□□□□ -0.8
CLK1-201ENST00000321356 METTL24Q5JXM2 366 aa10.07□□□□□ -0.8
CLK1-201ENST00000321356 RESP18Q5W5W9 173 aa10.07□□□□□ -0.8
CLK1-201ENST00000321356 KRT40Q6A162 431 aa10.07□□□□□ -0.8
CLK1-201ENST00000321356 SHC4Q6S5L8 630 aa10.07□□□□□ -0.8
CLK1-201ENST00000321356 GIGYF2Q6Y7W6 1299 aaKnown RBP10.07□□□□□ -0.8
CLK1-201ENST00000321356 KIF6Q6ZMV9 814 aa10.07□□□□□ -0.8
CLK1-201ENST00000321356 TMC6Q7Z403 805 aa10.07□□□□□ -0.8
CLK1-201ENST00000321356 SGMS1Q86VZ5 419 aa10.07□□□□□ -0.8
CLK1-201ENST00000321356 ZNF397Q8NF99 534 aaPredicted RBP10.07□□□□□ -0.8
CLK1-201ENST00000321356 TTLL11Q8NHH1 800 aa10.07□□□□□ -0.8
CLK1-201ENST00000321356 TMEM87BQ96K49 555 aa10.07□□□□□ -0.8
CLK1-201ENST00000321356 AIFM3Q96NN9 605 aa10.07□□□□□ -0.8
CLK1-201ENST00000321356 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.07□□□□□ -0.8
CLK1-201ENST00000321356 DENND2AQ9ULE3 1009 aa10.07□□□□□ -0.8
CLK1-201ENST00000321356 MAP3K15Q6ZN16 1313 aa10.07□□□□□ -0.8
CLK1-201ENST00000321356 TCRBV5S4A2TA0A5A2 114 aa10.06□□□□□ -0.8
CLK1-201ENST00000321356 SLU7O95391 586 aaKnown RBP10.06□□□□□ -0.8
CLK1-201ENST00000321356 TUBB4AP04350 444 aa10.06□□□□□ -0.8
CLK1-201ENST00000321356 ITGA6P23229 1130 aa10.06□□□□□ -0.8
CLK1-201ENST00000321356 ARID4AP29374 1257 aaPredicted RBP10.06□□□□□ -0.8
CLK1-201ENST00000321356 MARCKSP29966 332 aaPredicted RBP10.06□□□□□ -0.8
CLK1-201ENST00000321356 CDC27P30260 824 aa10.06□□□□□ -0.8
CLK1-201ENST00000321356 FANCCQ00597 558 aa10.06□□□□□ -0.8
CLK1-201ENST00000321356 SLC9C2Q5TAH2 1124 aa10.06□□□□□ -0.8
CLK1-201ENST00000321356 BRINP3Q76B58 766 aa10.06□□□□□ -0.8
CLK1-201ENST00000321356 JMYQ8N9B5 988 aa10.06□□□□□ -0.8
CLK1-201ENST00000321356 IGDCC4Q8TDY8 1250 aa10.06□□□□□ -0.8
CLK1-201ENST00000321356 CCDC85AQ96PX6 553 aaPredicted RBP10.06□□□□□ -0.8
CLK1-201ENST00000321356 GREM2Q9H772 168 aa10.06□□□□□ -0.8
CLK1-201ENST00000321356 PIH1D3Q9NQM4 214 aaKnown RBP10.06□□□□□ -0.8
CLK1-201ENST00000321356 MORC2Q9Y6X9 1032 aaPredicted RBP10.06□□□□□ -0.8
CLK1-201ENST00000321356 STK36Q9NRP7 1315 aa10.06□□□□□ -0.8
CLK1-201ENST00000321356 NID2Q14112 1375 aa10.06□□□□□ -0.8
CLK1-201ENST00000321356 MYO1BO43795 1136 aa10.06□□□□□ -0.8
CLK1-201ENST00000321356 ITGB4P16144 1822 aa10.06□□□□□ -0.8
CLK1-201ENST00000321356 CTSWP56202 376 aa10.06□□□□□ -0.8
CLK1-201ENST00000321356 CCDC93Q567U6 631 aa10.06□□□□□ -0.8
CLK1-201ENST00000321356 CPLX2Q6PUV4 134 aaKnown RBP10.06□□□□□ -0.8
CLK1-201ENST00000321356 LDHAL6AQ6ZMR3 332 aa10.06□□□□□ -0.8
CLK1-201ENST00000321356 NLRP10Q86W26 655 aa10.06□□□□□ -0.8
CLK1-201ENST00000321356 DNAJC10Q8IXB1 793 aa10.06□□□□□ -0.8
CLK1-201ENST00000321356 ELOA2Q8IYF1 753 aaPredicted RBP10.06□□□□□ -0.8
CLK1-201ENST00000321356 SYNE4Q8N205 404 aa10.06□□□□□ -0.8
CLK1-201ENST00000321356 LY9Q9HBG7 655 aa10.06□□□□□ -0.8
CLK1-201ENST00000321356 SENP2Q9HC62 589 aa10.06□□□□□ -0.8
CLK1-201ENST00000321356 FAM217BQ9NTX9 383 aaPredicted RBP10.06□□□□□ -0.8
CLK1-201ENST00000321356 FAM53CQ9NYF3 392 aa10.06□□□□□ -0.8
CLK1-201ENST00000321356 TMOD3Q9NYL9 352 aa10.06□□□□□ -0.8
CLK1-201ENST00000321356 SOS2Q07890 1332 aaPredicted RBP10.05□□□□□ -0.8
CLK1-201ENST00000321356 UBN2Q6ZU65 1347 aa10.05□□□□□ -0.8
CLK1-201ENST00000321356 ZNF532Q9HCE3 1301 aa10.05□□□□□ -0.8
CLK1-201ENST00000321356 B4E1Z4 1266 aa10.05□□□□□ -0.8
CLK1-201ENST00000321356 ZBTB43O43298 467 aa10.05□□□□□ -0.8
CLK1-201ENST00000321356 RANBP6O60518 1105 aaKnown RBP10.05□□□□□ -0.8
CLK1-201ENST00000321356 CUTAO60888 179 aa10.05□□□□□ -0.8
CLK1-201ENST00000321356 ATP1A3P13637 1013 aa10.05□□□□□ -0.8
CLK1-201ENST00000321356 PDE6AP16499 860 aa10.05□□□□□ -0.8
CLK1-201ENST00000321356 LMOD1P29536 600 aaPredicted RBP10.05□□□□□ -0.8
CLK1-201ENST00000321356 LIFRP42702 1097 aa10.05□□□□□ -0.8
CLK1-201ENST00000321356 MYL5Q02045 173 aa10.05□□□□□ -0.8
CLK1-201ENST00000321356 KMT5BQ4FZB7 885 aa10.05□□□□□ -0.8
CLK1-201ENST00000321356 STRBPQ96SI9 672 aaKnown RBP10.05□□□□□ -0.8
CLK1-201ENST00000321356 TMX1Q9H3N1 280 aa10.05□□□□□ -0.8
CLK1-201ENST00000321356 NUP98P52948 1817 aa10.05□□□□□ -0.8
CLK1-201ENST00000321356 ANKRD18BA2A2Z9 1011 aa10.04□□□□□ -0.8
CLK1-201ENST00000321356 NRDCO43847 1150 aa10.04□□□□□ -0.8
CLK1-201ENST00000321356 PDE8BO95263 885 aa10.04□□□□□ -0.8
CLK1-201ENST00000321356 STARD3NLO95772 234 aa10.04□□□□□ -0.8
CLK1-201ENST00000321356 METTL16Q86W50 562 aaKnown RBP10.04□□□□□ -0.8
CLK1-201ENST00000321356 PHKBQ93100 1093 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms