RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 PUM3Q15397 648 aaKnown RBP20.2■□□□□ 0.82
COL9A1-201ENST00000320755 CPLX2Q6PUV4 134 aaKnown RBP20.2■□□□□ 0.82
COL9A1-201ENST00000320755 SPATA5Q8NB90 893 aa20.2■□□□□ 0.82
COL9A1-201ENST00000320755 GOLGA8AA7E2F4 631 aa20.2■□□□□ 0.82
COL9A1-201ENST00000320755 IFIT3O14879 490 aaKnown RBP20.2■□□□□ 0.82
COL9A1-201ENST00000320755 MTERF4Q7Z6M4 381 aaKnown RBP20.2■□□□□ 0.82
COL9A1-201ENST00000320755 CLIC6Q96NY7 704 aa20.2■□□□□ 0.82
COL9A1-201ENST00000320755 ZMYM6O95789 1325 aa20.2■□□□□ 0.82
COL9A1-201ENST00000320755 IARSP41252 1262 aaKnown RBP20.19■□□□□ 0.82
COL9A1-201ENST00000320755 RASGRF1Q13972 1273 aa20.19■□□□□ 0.82
COL9A1-201ENST00000320755 CMTR1Q8N1G2 835 aaKnown RBP20.19■□□□□ 0.82
COL9A1-201ENST00000320755 LPIN2Q92539 896 aa20.19■□□□□ 0.82
COL9A1-201ENST00000320755 ACSBG1Q96GR2 724 aa20.19■□□□□ 0.82
COL9A1-201ENST00000320755 SLC26A6Q9BXS9 759 aa20.19■□□□□ 0.82
COL9A1-201ENST00000320755 AXDND1Q5T1B0 1012 aaPredicted RBP20.19■□□□□ 0.82
COL9A1-201ENST00000320755 MIGA1Q8NAN2 632 aa20.19■□□□□ 0.82
COL9A1-201ENST00000320755 ZSWIM5Q9P217 1185 aa20.19■□□□□ 0.82
COL9A1-201ENST00000320755 MROH7-TTC4A0A0A0MT08 1334 aa20.18■□□□□ 0.82
COL9A1-201ENST00000320755 UQCRFS1P1P0C7P4 283 aa20.18■□□□□ 0.82
COL9A1-201ENST00000320755 CDC25BP30305 580 aa20.18■□□□□ 0.82
COL9A1-201ENST00000320755 BCAMP50895 628 aa20.18■□□□□ 0.82
COL9A1-201ENST00000320755 SUSD4Q5VX71 490 aa20.18■□□□□ 0.82
COL9A1-201ENST00000320755 IFNL3Q8IZI9 196 aa20.18■□□□□ 0.82
COL9A1-201ENST00000320755 IFNKQ9P0W0 207 aa20.18■□□□□ 0.82
COL9A1-201ENST00000320755 SPEF2Q9C093 1822 aa20.18■□□□□ 0.82
COL9A1-201ENST00000320755 TOGARAM1Q9Y4F4 1720 aa20.18■□□□□ 0.82
COL9A1-201ENST00000320755 LMOD1P29536 600 aaPredicted RBP20.18■□□□□ 0.82
COL9A1-201ENST00000320755 TRIM29Q14134 588 aa20.18■□□□□ 0.82
COL9A1-201ENST00000320755 SPECC1Q5M775 1068 aa20.18■□□□□ 0.82
COL9A1-201ENST00000320755 EPB41L4AQ9HCS5 686 aaPredicted RBP20.18■□□□□ 0.82
COL9A1-201ENST00000320755 SLC12A7Q9Y666 1083 aa20.18■□□□□ 0.82
COL9A1-201ENST00000320755 MYO5AQ9Y4I1 1855 aaKnown RBP20.17■□□□□ 0.82
COL9A1-201ENST00000320755 SYKP43405 635 aa20.17■□□□□ 0.82
COL9A1-201ENST00000320755 MAP3K12Q12852 859 aa20.17■□□□□ 0.82
COL9A1-201ENST00000320755 NAA30Q147X3 362 aaPredicted RBP20.17■□□□□ 0.82
COL9A1-201ENST00000320755 IGDCC4Q8TDY8 1250 aa20.17■□□□□ 0.82
COL9A1-201ENST00000320755 TCRBV5S4A2TA0A5A2 114 aa20.17■□□□□ 0.82
COL9A1-201ENST00000320755 CDKL5O76039 1030 aa20.17■□□□□ 0.82
COL9A1-201ENST00000320755 SLC5A1P13866 664 aa20.17■□□□□ 0.82
COL9A1-201ENST00000320755 ATP2B1P20020 1258 aa20.17■□□□□ 0.82
COL9A1-201ENST00000320755 SLC39A14Q15043 492 aa20.17■□□□□ 0.82
COL9A1-201ENST00000320755 MYH15Q9Y2K3 1946 aa20.17■□□□□ 0.82
COL9A1-201ENST00000320755 TDO2P48775 406 aa20.16■□□□□ 0.82
COL9A1-201ENST00000320755 XPO4Q9C0E2 1151 aaKnown RBP20.16■□□□□ 0.82
COL9A1-201ENST00000320755 ZMYND15Q9H091 742 aa20.16■□□□□ 0.82
COL9A1-201ENST00000320755 ABCC12Q96J65 1359 aa20.16■□□□□ 0.82
COL9A1-201ENST00000320755 RANBP6O60518 1105 aaKnown RBP20.16■□□□□ 0.82
COL9A1-201ENST00000320755 CMA1P23946 247 aa20.16■□□□□ 0.82
COL9A1-201ENST00000320755 ARID4AP29374 1257 aaPredicted RBP20.16■□□□□ 0.82
COL9A1-201ENST00000320755 LY9Q9HBG7 655 aa20.16■□□□□ 0.82
COL9A1-201ENST00000320755 SHANK3Q9BYB0 1731 aa20.16■□□□□ 0.82
COL9A1-201ENST00000320755 PATL2C9JE40 543 aaKnown RBP20.16■□□□□ 0.82
COL9A1-201ENST00000320755 PPP4R3BQ5MIZ7 849 aa20.16■□□□□ 0.82
COL9A1-201ENST00000320755 TMC6Q7Z403 805 aa20.16■□□□□ 0.82
COL9A1-201ENST00000320755 TACC3Q9Y6A5 838 aa20.16■□□□□ 0.82
COL9A1-201ENST00000320755 PAPPAQ13219 1627 aa20.15■□□□□ 0.82
COL9A1-201ENST00000320755 AKAP11Q9UKA4 1901 aa20.15■□□□□ 0.82
COL9A1-201ENST00000320755 XIRP1Q702N8 1843 aaKnown RBP20.15■□□□□ 0.82
COL9A1-201ENST00000320755 PTPN21Q16825 1174 aa20.15■□□□□ 0.82
COL9A1-201ENST00000320755 PRDM10Q9NQV6 1147 aa20.15■□□□□ 0.82
COL9A1-201ENST00000320755 LRP2BPQ9P2M1 347 aa20.15■□□□□ 0.82
COL9A1-201ENST00000320755 KCNJ14Q9UNX9 436 aa20.15■□□□□ 0.82
COL9A1-201ENST00000320755 SLC4A4Q9Y6R1 1079 aa20.15■□□□□ 0.82
COL9A1-201ENST00000320755 GUCY1A2P33402 732 aa20.14■□□□□ 0.82
COL9A1-201ENST00000320755 PNOCQ13519 176 aa20.14■□□□□ 0.82
COL9A1-201ENST00000320755 CEP135Q66GS9 1140 aa20.14■□□□□ 0.82
COL9A1-201ENST00000320755 MFSD6Q6ZSS7 791 aa20.14■□□□□ 0.82
COL9A1-201ENST00000320755 NUP133Q8WUM0 1156 aa20.14■□□□□ 0.82
COL9A1-201ENST00000320755 TMEM87BQ96K49 555 aa20.14■□□□□ 0.82
COL9A1-201ENST00000320755 ZNF512BQ96KM6 892 aaPredicted RBP20.14■□□□□ 0.82
COL9A1-201ENST00000320755 FAM217BQ9NTX9 383 aaPredicted RBP20.14■□□□□ 0.82
COL9A1-201ENST00000320755 NBPF11Q86T75 865 aa20.14■□□□□ 0.81
COL9A1-201ENST00000320755 ZNF34Q8IZ26 560 aa20.14■□□□□ 0.81
COL9A1-201ENST00000320755 LCORLQ8N3X6 602 aa20.14■□□□□ 0.81
COL9A1-201ENST00000320755 CCDC112Q8NEF3 446 aa20.14■□□□□ 0.81
COL9A1-201ENST00000320755 ABCF2Q9UG63 623 aa20.14■□□□□ 0.81
COL9A1-201ENST00000320755 BCL9O00512 1426 aa20.14■□□□□ 0.81
COL9A1-201ENST00000320755 MROH5Q6ZUA9 1318 aa20.14■□□□□ 0.81
COL9A1-201ENST00000320755 IL6STP40189 918 aaPredicted RBP20.13■□□□□ 0.81
COL9A1-201ENST00000320755 SSRP1Q08945 709 aaKnown RBP20.13■□□□□ 0.81
COL9A1-201ENST00000320755 SHC4Q6S5L8 630 aa20.13■□□□□ 0.81
COL9A1-201ENST00000320755 PDCL2Q8N4E4 241 aa20.13■□□□□ 0.81
COL9A1-201ENST00000320755 WDR19Q8NEZ3 1342 aa20.13■□□□□ 0.81
COL9A1-201ENST00000320755 ATP1A3P13637 1013 aa20.13■□□□□ 0.81
COL9A1-201ENST00000320755 FGFR2P21802 821 aa20.13■□□□□ 0.81
COL9A1-201ENST00000320755 NLRP12P59046 1061 aa20.13■□□□□ 0.81
COL9A1-201ENST00000320755 CBX1P83916 185 aa20.13■□□□□ 0.81
COL9A1-201ENST00000320755 NTRK3Q16288 839 aa20.13■□□□□ 0.81
COL9A1-201ENST00000320755 HSP90AA4PQ58FG1 418 aa20.13■□□□□ 0.81
COL9A1-201ENST00000320755 SPDYE4A6NLX3 237 aa20.13■□□□□ 0.81
COL9A1-201ENST00000320755 GSG1L2A8MUP6 293 aa20.13■□□□□ 0.81
COL9A1-201ENST00000320755 MINDY4BA8MYZ0 360 aa20.13■□□□□ 0.81
COL9A1-201ENST00000320755 BTBD18B2RXH4 712 aa20.13■□□□□ 0.81
COL9A1-201ENST00000320755 ATP6V1AP38606 617 aa20.13■□□□□ 0.81
COL9A1-201ENST00000320755 CCZ1BP86790 482 aa20.13■□□□□ 0.81
COL9A1-201ENST00000320755 CCZ1P86791 482 aaPredicted RBP20.13■□□□□ 0.81
COL9A1-201ENST00000320755 PTPN14Q15678 1187 aa20.13■□□□□ 0.81
COL9A1-201ENST00000320755 CCDC94Q9BW85 323 aaPredicted RBP20.12■□□□□ 0.81
COL9A1-201ENST00000320755 WTIPA6NIX2 430 aaPredicted RBP20.12■□□□□ 0.81
COL9A1-201ENST00000320755 ERVV-1B6SEH8 477 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms