RNA–Protein interactions for RNA: ENST00000315660.8

TSC22D3-201, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 2,213 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-201ENST00000315660 LCORLQ8N3X6 602 aa18.22■□□□□ 0.51
TSC22D3-201ENST00000315660 SENP2Q9HC62 589 aa18.22■□□□□ 0.51
TSC22D3-201ENST00000315660 LRP2BPQ9P2M1 347 aa18.22■□□□□ 0.51
TSC22D3-201ENST00000315660 PRKAB2O43741 272 aa18.22■□□□□ 0.51
TSC22D3-201ENST00000315660 KINO60870 393 aaKnown RBP18.22■□□□□ 0.51
TSC22D3-201ENST00000315660 CTDSPL2Q05D32 466 aa18.22■□□□□ 0.51
TSC22D3-201ENST00000315660 VPS72Q15906 364 aa18.22■□□□□ 0.51
TSC22D3-201ENST00000315660 LY9Q9HBG7 655 aa18.22■□□□□ 0.51
TSC22D3-201ENST00000315660 CNTNAP4Q9C0A0 1308 aa18.21■□□□□ 0.51
TSC22D3-201ENST00000315660 SF3A1Q15459 793 aaKnown RBP18.21■□□□□ 0.51
TSC22D3-201ENST00000315660 DNTTIP2Q5QJE6 756 aaKnown RBP18.21■□□□□ 0.51
TSC22D3-201ENST00000315660 SGMS1Q86VZ5 419 aa18.21■□□□□ 0.51
TSC22D3-201ENST00000315660 KRT23Q9C075 422 aa18.21■□□□□ 0.51
TSC22D3-201ENST00000315660 CBX8Q9HC52 389 aa18.21■□□□□ 0.51
TSC22D3-201ENST00000315660 GJB4Q9NTQ9 266 aa18.21■□□□□ 0.51
TSC22D3-201ENST00000315660 GNL3LQ9NVN8 582 aaKnown RBP18.21■□□□□ 0.51
TSC22D3-201ENST00000315660 TACC3Q9Y6A5 838 aa18.21■□□□□ 0.51
TSC22D3-201ENST00000315660 ZNF804BA4D1E1 1349 aa18.21■□□□□ 0.51
TSC22D3-201ENST00000315660 RXRAP19793 462 aa18.21■□□□□ 0.5
TSC22D3-201ENST00000315660 TDO2P48775 406 aa18.21■□□□□ 0.5
TSC22D3-201ENST00000315660 FAM160A1Q05DH4 1040 aa18.21■□□□□ 0.5
TSC22D3-201ENST00000315660 SNW1Q13573 536 aaKnown RBP18.21■□□□□ 0.5
TSC22D3-201ENST00000315660 TMEM67Q5HYA8 995 aa18.21■□□□□ 0.5
TSC22D3-201ENST00000315660 LUZP1Q86V48 1076 aa18.21■□□□□ 0.5
TSC22D3-201ENST00000315660 MPNDQ8N594 471 aa18.21■□□□□ 0.5
TSC22D3-201ENST00000315660 KCNG4Q8TDN1 519 aa18.21■□□□□ 0.5
TSC22D3-201ENST00000315660 SLC4A4Q9Y6R1 1079 aa18.21■□□□□ 0.5
TSC22D3-201ENST00000315660 GOLGA6L6A8MZA4 724 aa18.2■□□□□ 0.5
TSC22D3-201ENST00000315660 ZBTB43O43298 467 aa18.2■□□□□ 0.5
TSC22D3-201ENST00000315660 POLR3DP05423 398 aaPredicted RBP18.2■□□□□ 0.5
TSC22D3-201ENST00000315660 AKNAD1Q5T1N1 836 aa18.2■□□□□ 0.5
TSC22D3-201ENST00000315660 SYNE3Q6ZMZ3 975 aa18.2■□□□□ 0.5
TSC22D3-201ENST00000315660 MFSD6Q6ZSS7 791 aa18.2■□□□□ 0.5
TSC22D3-201ENST00000315660 ENGASEQ8NFI3 743 aa18.2■□□□□ 0.5
TSC22D3-201ENST00000315660 MYRIPQ8NFW9 859 aa18.2■□□□□ 0.5
TSC22D3-201ENST00000315660 C8orf37Q96NL8 207 aa18.2■□□□□ 0.5
TSC22D3-201ENST00000315660 POLR3EQ9NVU0 708 aa18.2■□□□□ 0.5
TSC22D3-201ENST00000315660 BSDC1Q9NW68 430 aaPredicted RBP18.2■□□□□ 0.5
TSC22D3-201ENST00000315660 ZSWIM5Q9P217 1185 aa18.2■□□□□ 0.5
TSC22D3-201ENST00000315660 IQSEC3Q9UPP2 1182 aaPredicted RBP18.2■□□□□ 0.5
TSC22D3-201ENST00000315660 TIAM2Q8IVF5 1701 aa18.2■□□□□ 0.5
TSC22D3-201ENST00000315660 RGL2O15211 777 aa18.19■□□□□ 0.5
TSC22D3-201ENST00000315660 YEATS4O95619 227 aa18.19■□□□□ 0.5
TSC22D3-201ENST00000315660 TPM3P06753 285 aa18.19■□□□□ 0.5
TSC22D3-201ENST00000315660 GTF2E1P29083 439 aaPredicted RBP18.19■□□□□ 0.5
TSC22D3-201ENST00000315660 CDC27P30260 824 aa18.19■□□□□ 0.5
TSC22D3-201ENST00000315660 LIFRP42702 1097 aa18.19■□□□□ 0.5
TSC22D3-201ENST00000315660 ZNF165P49910 485 aa18.19■□□□□ 0.5
TSC22D3-201ENST00000315660 KIF23Q02241 960 aaPredicted RBP18.19■□□□□ 0.5
TSC22D3-201ENST00000315660 STK38Q15208 465 aa18.19■□□□□ 0.5
TSC22D3-201ENST00000315660 MYSM1Q5VVJ2 828 aa18.19■□□□□ 0.5
TSC22D3-201ENST00000315660 BICDL1Q6ZP65 573 aa18.19■□□□□ 0.5
TSC22D3-201ENST00000315660 MICU3Q86XE3 530 aa18.19■□□□□ 0.5
TSC22D3-201ENST00000315660 FSIP1Q8NA03 581 aa18.19■□□□□ 0.5
TSC22D3-201ENST00000315660 MIGA1Q8NAN2 632 aa18.19■□□□□ 0.5
TSC22D3-201ENST00000315660 LINC00301Q8NCQ3 95 aa18.19■□□□□ 0.5
TSC22D3-201ENST00000315660 NGLY1Q96IV0 654 aa18.19■□□□□ 0.5
TSC22D3-201ENST00000315660 PCDHA7Q9UN72 937 aa18.19■□□□□ 0.5
TSC22D3-201ENST00000315660 KIF28PB7ZC32 967 aa18.19■□□□□ 0.5
TSC22D3-201ENST00000315660 IFIT3O14879 490 aaKnown RBP18.19■□□□□ 0.5
TSC22D3-201ENST00000315660 GYG1P46976 350 aa18.19■□□□□ 0.5
TSC22D3-201ENST00000315660 UBE4AQ14139 1066 aa18.19■□□□□ 0.5
TSC22D3-201ENST00000315660 ADALQ6DHV7 355 aa18.19■□□□□ 0.5
TSC22D3-201ENST00000315660 PTF1AQ7RTS3 328 aa18.19■□□□□ 0.5
TSC22D3-201ENST00000315660 MRPS27Q92552 414 aaKnown RBP18.19■□□□□ 0.5
TSC22D3-201ENST00000315660 PRIMPOLQ96LW4 560 aa18.19■□□□□ 0.5
TSC22D3-201ENST00000315660 BCL2L12Q9HB09 334 aa18.19■□□□□ 0.5
TSC22D3-201ENST00000315660 CLIC4Q9Y696 253 aa18.19■□□□□ 0.5
TSC22D3-201ENST00000315660 CYP7A1P22680 504 aa18.18■□□□□ 0.5
TSC22D3-201ENST00000315660 SART3Q15020 963 aaKnown RBP18.18■□□□□ 0.5
TSC22D3-201ENST00000315660 TBC1D9BQ66K14 1250 aa18.18■□□□□ 0.5
TSC22D3-201ENST00000315660 SMIM5Q71RC9 77 aa18.18■□□□□ 0.5
TSC22D3-201ENST00000315660 STAG1Q8WVM7 1258 aa18.18■□□□□ 0.5
TSC22D3-201ENST00000315660 ALG1Q9BT22 464 aa18.18■□□□□ 0.5
TSC22D3-201ENST00000315660 SLC12A7Q9Y666 1083 aa18.18■□□□□ 0.5
TSC22D3-201ENST00000315660 A0A1W2PQ27 194 aa18.18■□□□□ 0.5
TSC22D3-201ENST00000315660 A0A1W2PQ64 194 aa18.18■□□□□ 0.5
TSC22D3-201ENST00000315660 A0A1W2PQD8 194 aa18.18■□□□□ 0.5
TSC22D3-201ENST00000315660 CCDC69A6NI79 296 aa18.18■□□□□ 0.5
TSC22D3-201ENST00000315660 WTIPA6NIX2 430 aaPredicted RBP18.18■□□□□ 0.5
TSC22D3-201ENST00000315660 GOLGA8AA7E2F4 631 aa18.18■□□□□ 0.5
TSC22D3-201ENST00000315660 NOLC1Q14978 699 aaKnown RBP eCLIP18.18■□□□□ 0.5
TSC22D3-201ENST00000315660 NTRK3Q16288 839 aa18.18■□□□□ 0.5
TSC22D3-201ENST00000315660 CAVIN4Q5BKX8 364 aa18.18■□□□□ 0.5
TSC22D3-201ENST00000315660 SLC10A5Q5PT55 438 aa18.18■□□□□ 0.5
TSC22D3-201ENST00000315660 CCDC144CPQ8IYA2 1237 aa18.18■□□□□ 0.5
TSC22D3-201ENST00000315660 ZNF830Q96NB3 372 aaPredicted RBP18.18■□□□□ 0.5
TSC22D3-201ENST00000315660 AIFM3Q96NN9 605 aa18.18■□□□□ 0.5
TSC22D3-201ENST00000315660 DNAJC25Q9H1X3 360 aa18.18■□□□□ 0.5
TSC22D3-201ENST00000315660 FAM217BQ9NTX9 383 aaPredicted RBP18.18■□□□□ 0.5
TSC22D3-201ENST00000315660 MINPP1Q9UNW1 487 aa18.18■□□□□ 0.5
TSC22D3-201ENST00000315660 PHKBQ93100 1093 aa18.17■□□□□ 0.5
TSC22D3-201ENST00000315660 MYL10Q9BUA6 226 aa18.17■□□□□ 0.5
TSC22D3-201ENST00000315660 RNF41Q9H4P4 317 aaPredicted RBP18.17■□□□□ 0.5
TSC22D3-201ENST00000315660 ABCF2Q9UG63 623 aa18.17■□□□□ 0.5
TSC22D3-201ENST00000315660 SCN7AQ01118 1682 aa18.17■□□□□ 0.5
TSC22D3-201ENST00000315660 IARSP41252 1262 aaKnown RBP18.17■□□□□ 0.5
TSC22D3-201ENST00000315660 STX1AQ16623 288 aa18.17■□□□□ 0.5
TSC22D3-201ENST00000315660 ADGRA1Q86SQ6 560 aa18.17■□□□□ 0.5
TSC22D3-201ENST00000315660 VPS37DQ86XT2 251 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms