RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 RASAL2Q9UJF2 1139 aa13.5□□□□□ -0.25
AMBRA1-201ENST00000314845 PABPN1LA6NDY0 278 aaKnown RBP13.5□□□□□ -0.25
AMBRA1-201ENST00000314845 TCIRG1Q13488 830 aa13.5□□□□□ -0.25
AMBRA1-201ENST00000314845 CCDC129Q6ZRS4 1044 aa13.5□□□□□ -0.25
AMBRA1-201ENST00000314845 APBB1IPQ7Z5R6 666 aaPredicted RBP13.5□□□□□ -0.25
AMBRA1-201ENST00000314845 USP21Q9UK80 565 aa13.5□□□□□ -0.25
AMBRA1-201ENST00000314845 EIF6P56537 245 aaKnown RBP13.5□□□□□ -0.25
AMBRA1-201ENST00000314845 MAP3K9P80192 1104 aa13.5□□□□□ -0.25
AMBRA1-201ENST00000314845 PPM1FP49593 454 aaPredicted RBP13.49□□□□□ -0.25
AMBRA1-201ENST00000314845 FAM160A1Q05DH4 1040 aa13.49□□□□□ -0.25
AMBRA1-201ENST00000314845 HAUS3Q68CZ6 603 aa13.49□□□□□ -0.25
AMBRA1-201ENST00000314845 SRRTQ9BXP5 876 aaKnown RBP13.49□□□□□ -0.25
AMBRA1-201ENST00000314845 LUC7L2Q9Y383 392 aaKnown RBP13.49□□□□□ -0.25
AMBRA1-201ENST00000314845 UBXN1Q04323 297 aa13.49□□□□□ -0.25
AMBRA1-201ENST00000314845 FAM107BQ9H098 131 aa13.49□□□□□ -0.25
AMBRA1-201ENST00000314845 ZBTB21Q9ULJ3 1066 aa13.49□□□□□ -0.25
AMBRA1-201ENST00000314845 POLR3GO15318 223 aaPredicted RBP13.49□□□□□ -0.25
AMBRA1-201ENST00000314845 DKC1O60832 514 aaKnown RBP eCLIP13.49□□□□□ -0.254e-8■■■■■ 36.5
AMBRA1-201ENST00000314845 ARID5AQ03989 594 aa13.49□□□□□ -0.25
AMBRA1-201ENST00000314845 ZNF174Q15697 407 aa13.49□□□□□ -0.25
AMBRA1-201ENST00000314845 CCDC77Q9BR77 488 aa13.49□□□□□ -0.25
AMBRA1-201ENST00000314845 V9GY48 417 aaPredicted RBP13.49□□□□□ -0.25
AMBRA1-201ENST00000314845 TAF5LO75529 589 aa13.48□□□□□ -0.25
AMBRA1-201ENST00000314845 CPA1P15085 419 aa13.48□□□□□ -0.25
AMBRA1-201ENST00000314845 RPS8P62241 208 aaKnown RBP13.48□□□□□ -0.25
AMBRA1-201ENST00000314845 MYL5Q02045 173 aa13.48□□□□□ -0.25
AMBRA1-201ENST00000314845 SPECC1LQ69YQ0 1117 aa13.48□□□□□ -0.25
AMBRA1-201ENST00000314845 OTUD7AQ8TE49 926 aaPredicted RBP13.48□□□□□ -0.25
AMBRA1-201ENST00000314845 ALDH1B1P30837 517 aa13.48□□□□□ -0.25
AMBRA1-201ENST00000314845 FCHSD1Q86WN1 690 aa13.48□□□□□ -0.25
AMBRA1-201ENST00000314845 SPATA5Q8NB90 893 aa13.48□□□□□ -0.25
AMBRA1-201ENST00000314845 FAM212AQ96EL1 285 aa13.48□□□□□ -0.25
AMBRA1-201ENST00000314845 ERBB4Q15303 1308 aa13.48□□□□□ -0.25
AMBRA1-201ENST00000314845 ATP2A1O14983 1001 aa13.48□□□□□ -0.25
AMBRA1-201ENST00000314845 PRDM1O75626 825 aa13.48□□□□□ -0.25
AMBRA1-201ENST00000314845 SP4Q02446 784 aa13.48□□□□□ -0.25
AMBRA1-201ENST00000314845 NOLC1Q14978 699 aaKnown RBP eCLIP13.48□□□□□ -0.25
AMBRA1-201ENST00000314845 LZTS2Q9BRK4 669 aa13.48□□□□□ -0.25
AMBRA1-201ENST00000314845 PNMA6EA0A0J9YXQ4 647 aa13.48□□□□□ -0.25
AMBRA1-201ENST00000314845 HSF2BPO75031 334 aa13.48□□□□□ -0.25
AMBRA1-201ENST00000314845 TUBB4BP68371 445 aa13.48□□□□□ -0.25
AMBRA1-201ENST00000314845 BRDTQ58F21 947 aaPredicted RBP13.48□□□□□ -0.25
AMBRA1-201ENST00000314845 GIGYF2Q6Y7W6 1299 aaKnown RBP13.48□□□□□ -0.25
AMBRA1-201ENST00000314845 RGS22Q8NE09 1264 aa13.48□□□□□ -0.25
AMBRA1-201ENST00000314845 INSRP06213 1382 aa13.47□□□□□ -0.25
AMBRA1-201ENST00000314845 SLC1A4P43007 532 aa13.47□□□□□ -0.25
AMBRA1-201ENST00000314845 ANO1Q5XXA6 986 aa13.47□□□□□ -0.25
AMBRA1-201ENST00000314845 DIS3L2Q8IYB7 885 aaKnown RBP13.47□□□□□ -0.25
AMBRA1-201ENST00000314845 FAM227BQ96M60 508 aa13.47□□□□□ -0.25
AMBRA1-201ENST00000314845 AATFQ9NY61 560 aaKnown RBP eCLIP13.47□□□□□ -0.25
AMBRA1-201ENST00000314845 CTAGE9A4FU28 777 aa13.47□□□□□ -0.25
AMBRA1-201ENST00000314845 CCT6AP40227 531 aaKnown RBP13.47□□□□□ -0.25
AMBRA1-201ENST00000314845 CNGA4Q8IV77 575 aa13.47□□□□□ -0.25
AMBRA1-201ENST00000314845 STK24Q9Y6E0 443 aa13.47□□□□□ -0.25
AMBRA1-201ENST00000314845 PLIN2Q99541 437 aa13.47□□□□□ -0.25
AMBRA1-201ENST00000314845 ARFGAP3Q9NP61 516 aa13.47□□□□□ -0.25
AMBRA1-201ENST00000314845 SSX2IPQ9Y2D8 614 aa13.47□□□□□ -0.25
AMBRA1-201ENST00000314845 FRMD4BQ9Y2L6 1034 aa13.47□□□□□ -0.25
AMBRA1-201ENST00000314845 SNX14Q9Y5W7 946 aa13.47□□□□□ -0.25
AMBRA1-201ENST00000314845 TRAF5O00463 557 aa13.47□□□□□ -0.25
AMBRA1-201ENST00000314845 GIGYF1O75420 1035 aaPredicted RBP13.47□□□□□ -0.25
AMBRA1-201ENST00000314845 EEF2P13639 858 aaKnown RBP13.47□□□□□ -0.25
AMBRA1-201ENST00000314845 ATP5JP18859 108 aa13.47□□□□□ -0.25
AMBRA1-201ENST00000314845 LTKP29376 864 aa13.47□□□□□ -0.25
AMBRA1-201ENST00000314845 KIF24Q5T7B8 1368 aa13.47□□□□□ -0.25
AMBRA1-201ENST00000314845 A0A1B0GVL5 298 aa13.46□□□□□ -0.25
AMBRA1-201ENST00000314845 NEURL1BA8MQ27 555 aa13.46□□□□□ -0.25
AMBRA1-201ENST00000314845 SMTNP53814 917 aa13.46□□□□□ -0.25
AMBRA1-201ENST00000314845 FLAD1Q8NFF5 587 aa13.46□□□□□ -0.25
AMBRA1-201ENST00000314845 PPP1R14CQ8TAE6 165 aa13.46□□□□□ -0.25
AMBRA1-201ENST00000314845 IFNKQ9P0W0 207 aa13.46□□□□□ -0.25
AMBRA1-201ENST00000314845 BAG6P46379 1132 aa13.46□□□□□ -0.25
AMBRA1-201ENST00000314845 KRT25Q7Z3Z0 450 aa13.46□□□□□ -0.25
AMBRA1-201ENST00000314845 SREK1Q8WXA9 508 aaKnown RBP13.46□□□□□ -0.25
AMBRA1-201ENST00000314845 CA8P35219 290 aa13.46□□□□□ -0.26
AMBRA1-201ENST00000314845 RNF216Q9NWF9 866 aaPredicted RBP13.46□□□□□ -0.26
AMBRA1-201ENST00000314845 IVNS1ABPQ9Y6Y0 642 aa13.46□□□□□ -0.26
AMBRA1-201ENST00000314845 DYNC1I1O14576 645 aa13.46□□□□□ -0.26
AMBRA1-201ENST00000314845 PHKG2P15735 406 aa13.46□□□□□ -0.26
AMBRA1-201ENST00000314845 ZAP70P43403 619 aa13.46□□□□□ -0.26
AMBRA1-201ENST00000314845 PIK3AP1Q6ZUJ8 805 aa13.46□□□□□ -0.26
AMBRA1-201ENST00000314845 ZNF532Q9HCE3 1301 aa13.45□□□□□ -0.26
AMBRA1-201ENST00000314845 CBX1P83916 185 aa13.45□□□□□ -0.26
AMBRA1-201ENST00000314845 PLCB3Q01970 1234 aa13.45□□□□□ -0.26
AMBRA1-201ENST00000314845 NONOQ15233 471 aaKnown RBP eCLIP13.45□□□□□ -0.26
AMBRA1-201ENST00000314845 RNF187Q5TA31 235 aaPredicted RBP13.45□□□□□ -0.26
AMBRA1-201ENST00000314845 CNNM4Q6P4Q7 775 aa13.45□□□□□ -0.26
AMBRA1-201ENST00000314845 ZNF354CQ86Y25 554 aa13.45□□□□□ -0.26
AMBRA1-201ENST00000314845 FNBP1Q96RU3 617 aa13.45□□□□□ -0.26
AMBRA1-201ENST00000314845 IQCGQ9H095 443 aaKnown RBP13.45□□□□□ -0.26
AMBRA1-201ENST00000314845 EPB41P11171 864 aaKnown RBP13.45□□□□□ -0.26
AMBRA1-201ENST00000314845 DDX17Q92841 729 aaKnown RBP13.45□□□□□ -0.26
AMBRA1-201ENST00000314845 KCNH3Q9ULD8 1083 aa13.45□□□□□ -0.26
AMBRA1-201ENST00000314845 ZKSCAN5Q9Y2L8 839 aa13.45□□□□□ -0.26
AMBRA1-201ENST00000314845 ZNF830Q96NB3 372 aaPredicted RBP13.45□□□□□ -0.26
AMBRA1-201ENST00000314845 CUTAO60888 179 aa13.45□□□□□ -0.26
AMBRA1-201ENST00000314845 APBA3O96018 575 aa13.45□□□□□ -0.26
AMBRA1-201ENST00000314845 NIM1KQ8IY84 436 aa13.45□□□□□ -0.26
AMBRA1-201ENST00000314845 ATP6V0A2Q9Y487 856 aa13.45□□□□□ -0.26
AMBRA1-201ENST00000314845 A0A1W2PRG0 241 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms